RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 TRMT13Q9NUP7 481 aaKnown RBP13.99□□□□□ -0.17
SMARCD3-213ENST00000489503 COLQQ9Y215 455 aaPredicted RBP13.99□□□□□ -0.17
SMARCD3-213ENST00000489503 FAM205CA6NFA0 338 aa13.98□□□□□ -0.17
SMARCD3-213ENST00000489503 DCDC2CA8MYV0 355 aa13.98□□□□□ -0.17
SMARCD3-213ENST00000489503 M0R2N6 131 aa13.98□□□□□ -0.17
SMARCD3-213ENST00000489503 DDX39AO00148 427 aaKnown RBP13.98□□□□□ -0.17
SMARCD3-213ENST00000489503 NOP56O00567 594 aaKnown RBP13.98□□□□□ -0.17
SMARCD3-213ENST00000489503 EDIL3O43854 480 aa13.98□□□□□ -0.17
SMARCD3-213ENST00000489503 B4GALT4O60513 344 aa13.98□□□□□ -0.17
SMARCD3-213ENST00000489503 HOXD8P13378 290 aaPredicted RBP13.98□□□□□ -0.17
SMARCD3-213ENST00000489503 ITGB3BPQ13352 177 aaPredicted RBP13.98□□□□□ -0.17
SMARCD3-213ENST00000489503 NEDD9Q14511 834 aa13.98□□□□□ -0.17
SMARCD3-213ENST00000489503 CEP55Q53EZ4 464 aa13.98□□□□□ -0.17
SMARCD3-213ENST00000489503 UTP14CQ5TAP6 766 aaKnown RBP13.98□□□□□ -0.17
SMARCD3-213ENST00000489503 PLA2G4DQ86XP0 818 aa13.98□□□□□ -0.17
SMARCD3-213ENST00000489503 TEX2Q8IWB9 1127 aa13.98□□□□□ -0.17
SMARCD3-213ENST00000489503 DAGLBQ8NCG7 672 aa13.98□□□□□ -0.17
SMARCD3-213ENST00000489503 GPR20Q99678 358 aa13.98□□□□□ -0.17
SMARCD3-213ENST00000489503 PHF20Q9BVI0 1012 aa13.98□□□□□ -0.17
SMARCD3-213ENST00000489503 PPP1R12CQ9BZL4 782 aa13.98□□□□□ -0.17
SMARCD3-213ENST00000489503 KCNH7Q9NS40 1196 aa13.98□□□□□ -0.17
SMARCD3-213ENST00000489503 TMEM39AQ9NV64 488 aa13.98□□□□□ -0.17
SMARCD3-213ENST00000489503 PRKAG2Q9UGJ0 569 aa13.98□□□□□ -0.17
SMARCD3-213ENST00000489503 TBX21Q9UL17 535 aa13.98□□□□□ -0.17
SMARCD3-213ENST00000489503 UMODL1Q5DID0 1318 aa13.97□□□□□ -0.17
SMARCD3-213ENST00000489503 MROH7Q68CQ1 1323 aa13.97□□□□□ -0.17
SMARCD3-213ENST00000489503 IGLV3-22A0A075B6J6 115 aa13.97□□□□□ -0.17
SMARCD3-213ENST00000489503 KPNA6O60684 536 aa13.97□□□□□ -0.17
SMARCD3-213ENST00000489503 F2P00734 622 aa13.97□□□□□ -0.17
SMARCD3-213ENST00000489503 LGALS2P05162 132 aa13.97□□□□□ -0.17
SMARCD3-213ENST00000489503 PSEN2P49810 448 aa13.97□□□□□ -0.17
SMARCD3-213ENST00000489503 GUCY1B3Q02153 619 aa13.97□□□□□ -0.17
SMARCD3-213ENST00000489503 MFSD10Q14728 455 aa13.97□□□□□ -0.17
SMARCD3-213ENST00000489503 TBCKQ8TEA7 893 aa13.97□□□□□ -0.17
SMARCD3-213ENST00000489503 BADQ92934 168 aa13.97□□□□□ -0.17
SMARCD3-213ENST00000489503 CDHR1Q96JP9 859 aa13.97□□□□□ -0.17
SMARCD3-213ENST00000489503 TOX2Q96NM4 488 aa13.97□□□□□ -0.17
SMARCD3-213ENST00000489503 AGO4Q9HCK5 861 aaKnown RBP13.97□□□□□ -0.17
SMARCD3-213ENST00000489503 MEIS1O00470 390 aa13.96□□□□□ -0.17
SMARCD3-213ENST00000489503 TLR3O15455 904 aaKnown RBP13.96□□□□□ -0.17
SMARCD3-213ENST00000489503 ST18O60284 1047 aa13.96□□□□□ -0.17
SMARCD3-213ENST00000489503 TDP2O95551 362 aa13.96□□□□□ -0.17
SMARCD3-213ENST00000489503 CD4P01730 458 aa13.96□□□□□ -0.17
SMARCD3-213ENST00000489503 CYP3A4P08684 503 aa13.96□□□□□ -0.17
SMARCD3-213ENST00000489503 CYP2C9P11712 490 aa13.96□□□□□ -0.17
SMARCD3-213ENST00000489503 NR5A1Q13285 461 aa13.96□□□□□ -0.17
SMARCD3-213ENST00000489503 INF2Q27J81 1249 aa13.96□□□□□ -0.17
SMARCD3-213ENST00000489503 KIAA0753Q2KHM9 967 aa13.96□□□□□ -0.17
SMARCD3-213ENST00000489503 PRR16Q569H4 304 aa13.96□□□□□ -0.17
SMARCD3-213ENST00000489503 EARS2Q5JPH6 523 aaKnown RBP13.96□□□□□ -0.17
SMARCD3-213ENST00000489503 WASF1Q92558 559 aa13.96□□□□□ -0.17
SMARCD3-213ENST00000489503 GJA10Q969M2 543 aa13.96□□□□□ -0.17
SMARCD3-213ENST00000489503 ZSCAN31Q96LW9 406 aaPredicted RBP13.96□□□□□ -0.17
SMARCD3-213ENST00000489503 GDF15Q99988 308 aa13.96□□□□□ -0.17
SMARCD3-213ENST00000489503 SENP7Q9BQF6 1050 aa13.96□□□□□ -0.17
SMARCD3-213ENST00000489503 C16orf70Q9BSU1 422 aa13.96□□□□□ -0.17
SMARCD3-213ENST00000489503 PRO3102Q9H379 93 aa13.96□□□□□ -0.17
SMARCD3-213ENST00000489503 SH2B1Q9NRF2 756 aaPredicted RBP13.96□□□□□ -0.17
SMARCD3-213ENST00000489503 GSTTP1A0A1W2PQM5 241 aa13.95□□□□□ -0.18
SMARCD3-213ENST00000489503 KIAA0355O15063 1070 aa13.95□□□□□ -0.18
SMARCD3-213ENST00000489503 RAG1P15918 1043 aa13.95□□□□□ -0.18
SMARCD3-213ENST00000489503 XBP1P17861 261 aa13.95□□□□□ -0.18
SMARCD3-213ENST00000489503 CYP2C18P33260 490 aa13.95□□□□□ -0.18
SMARCD3-213ENST00000489503 TCF7P36402 384 aaPredicted RBP13.95□□□□□ -0.18
SMARCD3-213ENST00000489503 HIC1Q14526 733 aa13.95□□□□□ -0.18
SMARCD3-213ENST00000489503 MCTP2Q6DN12 878 aa13.95□□□□□ -0.18
SMARCD3-213ENST00000489503 GDF6Q6KF10 455 aaPredicted RBP13.95□□□□□ -0.18
SMARCD3-213ENST00000489503 LENG9Q96B70 501 aa13.95□□□□□ -0.18
SMARCD3-213ENST00000489503 TMX3Q96JJ7 454 aa13.95□□□□□ -0.18
SMARCD3-213ENST00000489503 LBHD1Q9BQE6 289 aaPredicted RBP13.95□□□□□ -0.18
SMARCD3-213ENST00000489503 JPH1Q9HDC5 661 aaPredicted RBP13.95□□□□□ -0.18
SMARCD3-213ENST00000489503 HDAC6Q9UBN7 1215 aa13.95□□□□□ -0.18
SMARCD3-213ENST00000489503 TRIP12Q14669 1992 aaPredicted RBP13.94□□□□□ -0.18
SMARCD3-213ENST00000489503 CCDC194A0A1B0GVG4 234 aa13.94□□□□□ -0.18
SMARCD3-213ENST00000489503 HAS3O00219 553 aa13.94□□□□□ -0.18
SMARCD3-213ENST00000489503 PPFIA4O75335 1185 aa13.94□□□□□ -0.18
SMARCD3-213ENST00000489503 CCNE2O96020 404 aa13.94□□□□□ -0.18
SMARCD3-213ENST00000489503 MARK3P27448 753 aa13.94□□□□□ -0.18
SMARCD3-213ENST00000489503 KRT2P35908 639 aa13.94□□□□□ -0.18
SMARCD3-213ENST00000489503 EPHB4P54760 987 aa13.94□□□□□ -0.18
SMARCD3-213ENST00000489503 ZNF200P98182 395 aaPredicted RBP13.94□□□□□ -0.18
SMARCD3-213ENST00000489503 NONOQ15233 471 aaKnown RBP eCLIP13.94□□□□□ -0.18
SMARCD3-213ENST00000489503 KRT40Q6A162 431 aa13.94□□□□□ -0.18
SMARCD3-213ENST00000489503 GALNT17Q6IS24 598 aa13.94□□□□□ -0.18
SMARCD3-213ENST00000489503 NFRKBQ6P4R8 1299 aa13.94□□□□□ -0.18
SMARCD3-213ENST00000489503 PIK3AP1Q6ZUJ8 805 aa13.94□□□□□ -0.18
SMARCD3-213ENST00000489503 NIPA1Q7RTP0 329 aa13.94□□□□□ -0.18
SMARCD3-213ENST00000489503 KRT25Q7Z3Z0 450 aa13.94□□□□□ -0.18
SMARCD3-213ENST00000489503 GIMAP8Q8ND71 665 aaPredicted RBP13.94□□□□□ -0.18
SMARCD3-213ENST00000489503 CTAGE1Q96RT6 745 aa13.94□□□□□ -0.18
SMARCD3-213ENST00000489503 SDF4Q9BRK5 362 aa13.94□□□□□ -0.18
SMARCD3-213ENST00000489503 UBE2OQ9C0C9 1292 aaKnown RBP13.94□□□□□ -0.18
SMARCD3-213ENST00000489503 TANC1Q9C0D5 1861 aa13.94□□□□□ -0.18
SMARCD3-213ENST00000489503 SLC9A2Q9UBY0 812 aa13.94□□□□□ -0.18
SMARCD3-213ENST00000489503 NFASCO94856 1347 aa13.93□□□□□ -0.18
SMARCD3-213ENST00000489503 H3BRB1 525 aa13.93□□□□□ -0.18
SMARCD3-213ENST00000489503 MMP1P03956 469 aa13.93□□□□□ -0.18
SMARCD3-213ENST00000489503 CIITAP33076 1130 aa13.93□□□□□ -0.18
SMARCD3-213ENST00000489503 ACTR2P61160 394 aa13.93□□□□□ -0.18
SMARCD3-213ENST00000489503 SETQ01105 290 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms