RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 ABCB5Q2M3G0 1257 aa9.23□□□□□ -0.93
EXOSC3-206ENST00000489414 TRIM71Q2Q1W2 868 aaKnown RBP9.23□□□□□ -0.93
EXOSC3-206ENST00000489414 SESTD1Q86VW0 696 aa9.23□□□□□ -0.93
EXOSC3-206ENST00000489414 SH3RF3Q8TEJ3 882 aaPredicted RBP9.23□□□□□ -0.93
EXOSC3-206ENST00000489414 LPIN2Q92539 896 aa9.23□□□□□ -0.93
EXOSC3-206ENST00000489414 FAM126AQ9BYI3 521 aaPredicted RBP9.23□□□□□ -0.93
EXOSC3-206ENST00000489414 ABCF2Q9UG63 623 aa9.23□□□□□ -0.93
EXOSC3-206ENST00000489414 FBXO3Q9UK99 471 aa9.23□□□□□ -0.93
EXOSC3-206ENST00000489414 RIPK3Q9Y572 518 aa9.23□□□□□ -0.93
EXOSC3-206ENST00000489414 FLT1P17948 1338 aa9.23□□□□□ -0.93
EXOSC3-206ENST00000489414 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.22□□□□□ -0.93
EXOSC3-206ENST00000489414 DDX10Q13206 875 aaKnown RBP9.22□□□□□ -0.93
EXOSC3-206ENST00000489414 DUSP28Q4G0W2 176 aa9.22□□□□□ -0.93
EXOSC3-206ENST00000489414 TPRNQ4KMQ1 711 aa9.22□□□□□ -0.93
EXOSC3-206ENST00000489414 CCDC30Q5VVM6 783 aa9.22□□□□□ -0.93
EXOSC3-206ENST00000489414 XRRA1Q6P2D8 792 aa9.22□□□□□ -0.93
EXOSC3-206ENST00000489414 TSSK4Q6SA08 328 aa9.22□□□□□ -0.93
EXOSC3-206ENST00000489414 ZNF689Q96CS4 500 aaPredicted RBP9.22□□□□□ -0.93
EXOSC3-206ENST00000489414 ZFP91Q96JP5 570 aaPredicted RBP9.22□□□□□ -0.93
EXOSC3-206ENST00000489414 BCO2Q9BYV7 579 aa9.22□□□□□ -0.93
EXOSC3-206ENST00000489414 PRMT8Q9NR22 394 aaPredicted RBP9.22□□□□□ -0.93
EXOSC3-206ENST00000489414 ARHGEF3Q9NR81 526 aa9.22□□□□□ -0.93
EXOSC3-206ENST00000489414 GNL3LQ9NVN8 582 aaKnown RBP9.22□□□□□ -0.93
EXOSC3-206ENST00000489414 KLK13Q9UKR3 277 aa9.22□□□□□ -0.93
EXOSC3-206ENST00000489414 ELL2O00472 640 aaPredicted RBP9.21□□□□□ -0.94
EXOSC3-206ENST00000489414 HYAL3O43820 417 aaPredicted RBP9.21□□□□□ -0.94
EXOSC3-206ENST00000489414 WEE2P0C1S8 567 aa9.21□□□□□ -0.94
EXOSC3-206ENST00000489414 PPP2R1AP30153 589 aa9.21□□□□□ -0.94
EXOSC3-206ENST00000489414 TMPOP42166 694 aaKnown RBP9.21□□□□□ -0.94
EXOSC3-206ENST00000489414 BTG3Q14201 252 aaPredicted RBP9.21□□□□□ -0.94
EXOSC3-206ENST00000489414 SPTY2D1Q68D10 685 aaPredicted RBP9.21□□□□□ -0.94
EXOSC3-206ENST00000489414 LLGL2Q6P1M3 1020 aa9.21□□□□□ -0.94
EXOSC3-206ENST00000489414 SLC4A10Q6U841 1118 aa9.21□□□□□ -0.94
EXOSC3-206ENST00000489414 MAPKAPK5Q8IW41 473 aa9.21□□□□□ -0.94
EXOSC3-206ENST00000489414 WNT8BQ93098 351 aa9.21□□□□□ -0.94
EXOSC3-206ENST00000489414 YTHDC1Q96MU7 727 aaKnown RBP9.21□□□□□ -0.94
EXOSC3-206ENST00000489414 MYL10Q9BUA6 226 aa9.21□□□□□ -0.94
EXOSC3-206ENST00000489414 TEX13BQ9BXU2 312 aa9.21□□□□□ -0.94
EXOSC3-206ENST00000489414 PNNQ9H307 717 aaKnown RBP9.21□□□□□ -0.94
EXOSC3-206ENST00000489414 FBXO28Q9NVF7 368 aa9.21□□□□□ -0.94
EXOSC3-206ENST00000489414 IGSF9Q9P2J2 1179 aa9.21□□□□□ -0.94
EXOSC3-206ENST00000489414 DBR1Q9UK59 544 aaKnown RBP9.21□□□□□ -0.94
EXOSC3-206ENST00000489414 URB1O60287 2271 aaKnown RBP9.2□□□□□ -0.94
EXOSC3-206ENST00000489414 ANP32CO43423 234 aa9.2□□□□□ -0.94
EXOSC3-206ENST00000489414 HLA-DOAP06340 250 aa9.2□□□□□ -0.94
EXOSC3-206ENST00000489414 SEPT2Q15019 361 aa9.2□□□□□ -0.94
EXOSC3-206ENST00000489414 SF3A2Q15428 464 aaKnown RBP9.2□□□□□ -0.94
EXOSC3-206ENST00000489414 CERKLQ49MI3 558 aaPredicted RBP9.2□□□□□ -0.94
EXOSC3-206ENST00000489414 KIAA1841Q6NSI8 718 aa9.2□□□□□ -0.94
EXOSC3-206ENST00000489414 ATF7IPQ6VMQ6 1270 aa9.2□□□□□ -0.94
EXOSC3-206ENST00000489414 FBXO16Q8IX29 292 aaPredicted RBP9.2□□□□□ -0.94
EXOSC3-206ENST00000489414 SPICE1Q8N0Z3 855 aa9.2□□□□□ -0.94
EXOSC3-206ENST00000489414 LSM14AQ8ND56 463 aaKnown RBP9.2□□□□□ -0.94
EXOSC3-206ENST00000489414 MICAL1Q8TDZ2 1067 aa9.2□□□□□ -0.94
EXOSC3-206ENST00000489414 CABP5Q9NP86 173 aa9.2□□□□□ -0.94
EXOSC3-206ENST00000489414 PPP1R9AQ9ULJ8 1098 aa9.2□□□□□ -0.94
EXOSC3-206ENST00000489414 MRPL42Q9Y6G3 142 aaKnown RBP9.2□□□□□ -0.94
EXOSC3-206ENST00000489414 PDS5AQ29RF7 1337 aaKnown RBP9.2□□□□□ -0.94
EXOSC3-206ENST00000489414 ATMQ13315 3056 aa9.2□□□□□ -0.94
EXOSC3-206ENST00000489414 NAV1Q8NEY1 1877 aa9.19□□□□□ -0.94
EXOSC3-206ENST00000489414 FAM221BA6H8Z2 402 aa9.19□□□□□ -0.94
EXOSC3-206ENST00000489414 FSCN2O14926 492 aa9.19□□□□□ -0.94
EXOSC3-206ENST00000489414 KPNA6O60684 536 aa9.19□□□□□ -0.94
EXOSC3-206ENST00000489414 HSPA5P11021 654 aaKnown RBP9.19□□□□□ -0.94
EXOSC3-206ENST00000489414 SRFP11831 508 aa9.19□□□□□ -0.94
EXOSC3-206ENST00000489414 TDGF1P13385 188 aa9.19□□□□□ -0.94
EXOSC3-206ENST00000489414 PHKA1P46020 1223 aa9.19□□□□□ -0.94
EXOSC3-206ENST00000489414 STARD6P59095 220 aa9.19□□□□□ -0.94
EXOSC3-206ENST00000489414 CNTN2Q02246 1040 aa9.19□□□□□ -0.94
EXOSC3-206ENST00000489414 PTK7Q13308 1070 aa9.19□□□□□ -0.94
EXOSC3-206ENST00000489414 KIAA1211LQ6NV74 962 aa9.19□□□□□ -0.94
EXOSC3-206ENST00000489414 G2E3Q7L622 706 aa9.19□□□□□ -0.94
EXOSC3-206ENST00000489414 ANKRD35Q8N283 1001 aa9.19□□□□□ -0.94
EXOSC3-206ENST00000489414 C12orf50Q8NA57 414 aaPredicted RBP9.19□□□□□ -0.94
EXOSC3-206ENST00000489414 GPR152Q8TDT2 470 aa9.19□□□□□ -0.94
EXOSC3-206ENST00000489414 TGFBRAP1Q8WUH2 860 aa9.19□□□□□ -0.94
EXOSC3-206ENST00000489414 DNAAF4Q8WXU2 420 aa9.19□□□□□ -0.94
EXOSC3-206ENST00000489414 SEPT8Q92599 483 aa9.19□□□□□ -0.94
EXOSC3-206ENST00000489414 CASP10Q92851 521 aa9.19□□□□□ -0.94
EXOSC3-206ENST00000489414 NSUN4Q96CB9 384 aaKnown RBP9.19□□□□□ -0.94
EXOSC3-206ENST00000489414 ACSF2Q96CM8 615 aaPredicted RBP9.19□□□□□ -0.94
EXOSC3-206ENST00000489414 MKNK1Q9BUB5 465 aa9.19□□□□□ -0.94
EXOSC3-206ENST00000489414 DDX49Q9Y6V7 483 aaKnown RBP9.19□□□□□ -0.94
EXOSC3-206ENST00000489414 MYH7BA7E2Y1 1941 aa9.19□□□□□ -0.94
EXOSC3-206ENST00000489414 TTC3P53804 2025 aa9.19□□□□□ -0.94
EXOSC3-206ENST00000489414 POLQO75417 2590 aa9.18□□□□□ -0.94
EXOSC3-206ENST00000489414 ASB14A6NK59 587 aa9.18□□□□□ -0.94
EXOSC3-206ENST00000489414 PYCARD-AS1I3L0S3 204 aa9.18□□□□□ -0.94
EXOSC3-206ENST00000489414 WISP1O95388 367 aa9.18□□□□□ -0.94
EXOSC3-206ENST00000489414 LDHCP07864 332 aa9.18□□□□□ -0.94
EXOSC3-206ENST00000489414 CHRM1P11229 460 aaPredicted RBP9.18□□□□□ -0.94
EXOSC3-206ENST00000489414 MYH1P12882 1939 aa9.18□□□□□ -0.94
EXOSC3-206ENST00000489414 MAGEA9P43362 315 aa9.18□□□□□ -0.94
EXOSC3-206ENST00000489414 GSTO1P78417 241 aa9.18□□□□□ -0.94
EXOSC3-206ENST00000489414 UBE3AQ05086 875 aa9.18□□□□□ -0.94
EXOSC3-206ENST00000489414 RASGRF1Q13972 1273 aa9.18□□□□□ -0.94
EXOSC3-206ENST00000489414 SH3PXD2AQ5TCZ1 1133 aa9.18□□□□□ -0.94
EXOSC3-206ENST00000489414 DCLRE1AQ6PJP8 1040 aa9.18□□□□□ -0.94
EXOSC3-206ENST00000489414 RUFY4Q6ZNE9 571 aa9.18□□□□□ -0.94
EXOSC3-206ENST00000489414 KIAA1211Q6ZU35 1233 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms