RNA–Protein interactions for RNA: ENST00000489266.5

NSMCE4A-211, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 1 (best)

Gene NSMCE4A, Length 2,399 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-211ENST00000489266 MYBL1P10243 752 aa23.3■■□□□ 1.32
NSMCE4A-211ENST00000489266 ALDH3A1P30838 453 aa23.3■■□□□ 1.32
NSMCE4A-211ENST00000489266 FLT3P36888 993 aa23.3■■□□□ 1.32
NSMCE4A-211ENST00000489266 MSH2P43246 934 aa23.3■■□□□ 1.32
NSMCE4A-211ENST00000489266 TUBP50607 506 aa23.3■■□□□ 1.32
NSMCE4A-211ENST00000489266 RNASE9P60153 205 aaKnown RBP23.3■■□□□ 1.32
NSMCE4A-211ENST00000489266 SGSM1Q2NKQ1 1148 aa23.3■■□□□ 1.32
NSMCE4A-211ENST00000489266 CCDC57Q2TAC2 916 aa23.3■■□□□ 1.32
NSMCE4A-211ENST00000489266 CSGALNACT2Q8N6G5 542 aa23.3■■□□□ 1.32
NSMCE4A-211ENST00000489266 CNBD1Q8NA66 436 aa23.3■■□□□ 1.32
NSMCE4A-211ENST00000489266 LRRC4CQ9HCJ2 640 aa23.3■■□□□ 1.32
NSMCE4A-211ENST00000489266 ARHGEF3Q9NR81 526 aa23.3■■□□□ 1.32
NSMCE4A-211ENST00000489266 PNMA2Q9UL42 364 aa23.3■■□□□ 1.32
NSMCE4A-211ENST00000489266 ZNF142P52746 1687 aaPredicted RBP23.3■■□□□ 1.32
NSMCE4A-211ENST00000489266 PALMO75781 387 aa23.29■■□□□ 1.32
NSMCE4A-211ENST00000489266 PYGBP11216 843 aa23.29■■□□□ 1.32
NSMCE4A-211ENST00000489266 TCIRG1Q13488 830 aa23.29■■□□□ 1.32
NSMCE4A-211ENST00000489266 KLHL29Q96CT2 875 aa23.29■■□□□ 1.32
NSMCE4A-211ENST00000489266 MTA3Q9BTC8 594 aa23.29■■□□□ 1.32
NSMCE4A-211ENST00000489266 TACC3Q9Y6A5 838 aa23.29■■□□□ 1.32
NSMCE4A-211ENST00000489266 MYH2Q9UKX2 1941 aa23.29■■□□□ 1.32
NSMCE4A-211ENST00000489266 F8VZ95 297 aa23.29■■□□□ 1.32
NSMCE4A-211ENST00000489266 FTCDO95954 541 aa23.29■■□□□ 1.32
NSMCE4A-211ENST00000489266 LACTBP83111 547 aaPredicted RBP23.29■■□□□ 1.32
NSMCE4A-211ENST00000489266 ATP11AP98196 1134 aa23.29■■□□□ 1.32
NSMCE4A-211ENST00000489266 ASTE1Q2TB18 679 aaPredicted RBP23.29■■□□□ 1.32
NSMCE4A-211ENST00000489266 MEI1Q5TIA1 1274 aa23.29■■□□□ 1.32
NSMCE4A-211ENST00000489266 TRIM68Q6AZZ1 485 aa23.29■■□□□ 1.32
NSMCE4A-211ENST00000489266 KCNV2Q8TDN2 545 aa23.29■■□□□ 1.32
NSMCE4A-211ENST00000489266 RBM41Q96IZ5 413 aaKnown RBP23.29■■□□□ 1.32
NSMCE4A-211ENST00000489266 CNOT6LQ96LI5 555 aaKnown RBP23.29■■□□□ 1.32
NSMCE4A-211ENST00000489266 STRBPQ96SI9 672 aaKnown RBP23.29■■□□□ 1.32
NSMCE4A-211ENST00000489266 NOC4LQ9BVI4 516 aaKnown RBP23.29■■□□□ 1.32
NSMCE4A-211ENST00000489266 PKD1L3Q7Z443 1732 aa23.29■■□□□ 1.32
NSMCE4A-211ENST00000489266 SLC1A4P43007 532 aa23.28■■□□□ 1.32
NSMCE4A-211ENST00000489266 CUL3Q13618 768 aa23.28■■□□□ 1.32
NSMCE4A-211ENST00000489266 AKNAD1Q5T1N1 836 aa23.28■■□□□ 1.32
NSMCE4A-211ENST00000489266 MAEAQ7L5Y9 396 aa23.28■■□□□ 1.32
NSMCE4A-211ENST00000489266 TMC3Q7Z5M5 1100 aa23.28■■□□□ 1.32
NSMCE4A-211ENST00000489266 RAB17Q9H0T7 212 aa23.28■■□□□ 1.32
NSMCE4A-211ENST00000489266 WFS1O76024 890 aa23.28■■□□□ 1.32
NSMCE4A-211ENST00000489266 MCAMP43121 646 aa23.28■■□□□ 1.32
NSMCE4A-211ENST00000489266 MTIF2P46199 727 aaKnown RBP23.28■■□□□ 1.32
NSMCE4A-211ENST00000489266 GFPT1Q06210 699 aaPredicted RBP23.28■■□□□ 1.32
NSMCE4A-211ENST00000489266 LMNTD2Q8IXW0 634 aa23.28■■□□□ 1.32
NSMCE4A-211ENST00000489266 TNFRSF25Q93038 417 aa23.28■■□□□ 1.32
NSMCE4A-211ENST00000489266 A0A1B0GVG6 124 aa23.27■■□□□ 1.32
NSMCE4A-211ENST00000489266 EPHB6O15197 1021 aa23.27■■□□□ 1.32
NSMCE4A-211ENST00000489266 FLOT1O75955 427 aa23.27■■□□□ 1.32
NSMCE4A-211ENST00000489266 COPS2P61201 443 aa23.27■■□□□ 1.32
NSMCE4A-211ENST00000489266 BNIP1Q12981 228 aa23.27■■□□□ 1.32
NSMCE4A-211ENST00000489266 ADAM9Q13443 819 aa23.27■■□□□ 1.32
NSMCE4A-211ENST00000489266 PKN1Q16512 942 aa23.27■■□□□ 1.32
NSMCE4A-211ENST00000489266 CMPK2Q5EBM0 449 aa23.27■■□□□ 1.32
NSMCE4A-211ENST00000489266 ATL2Q8NHH9 583 aa23.27■■□□□ 1.32
NSMCE4A-211ENST00000489266 PBKQ96KB5 322 aa23.27■■□□□ 1.32
NSMCE4A-211ENST00000489266 SYT15Q9BQS2 421 aa23.27■■□□□ 1.32
NSMCE4A-211ENST00000489266 CCDC134Q9H6E4 229 aa23.27■■□□□ 1.32
NSMCE4A-211ENST00000489266 ZNF532Q9HCE3 1301 aa23.27■■□□□ 1.32
NSMCE4A-211ENST00000489266 PPP2R5BQ15173 497 aa23.27■■□□□ 1.32
NSMCE4A-211ENST00000489266 IFNL3Q8IZI9 196 aa23.27■■□□□ 1.32
NSMCE4A-211ENST00000489266 KIF2BQ8N4N8 673 aa23.27■■□□□ 1.32
NSMCE4A-211ENST00000489266 DHTKD1Q96HY7 919 aaPredicted RBP23.27■■□□□ 1.32
NSMCE4A-211ENST00000489266 STK38LQ9Y2H1 464 aa23.27■■□□□ 1.32
NSMCE4A-211ENST00000489266 GNAZP19086 355 aa23.26■■□□□ 1.31
NSMCE4A-211ENST00000489266 MMP13P45452 471 aa23.26■■□□□ 1.31
NSMCE4A-211ENST00000489266 IL17AQ16552 155 aa23.26■■□□□ 1.31
NSMCE4A-211ENST00000489266 MFSD6Q6ZSS7 791 aa23.26■■□□□ 1.31
NSMCE4A-211ENST00000489266 TMC4Q7Z404 712 aa23.26■■□□□ 1.31
NSMCE4A-211ENST00000489266 FAM114A1Q8IWE2 563 aa23.26■■□□□ 1.31
NSMCE4A-211ENST00000489266 ZNF654Q8IZM8 581 aa23.26■■□□□ 1.31
NSMCE4A-211ENST00000489266 GIMAP8Q8ND71 665 aaPredicted RBP23.26■■□□□ 1.31
NSMCE4A-211ENST00000489266 BICD1Q96G01 975 aa23.26■■□□□ 1.31
NSMCE4A-211ENST00000489266 EEF2KMTQ96G04 330 aa23.26■■□□□ 1.31
NSMCE4A-211ENST00000489266 TRIM4Q9C037 500 aa23.26■■□□□ 1.31
NSMCE4A-211ENST00000489266 ADAM7Q9H2U9 754 aa23.26■■□□□ 1.31
NSMCE4A-211ENST00000489266 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.26■■□□□ 1.31
NSMCE4A-211ENST00000489266 IMPDH2P12268 514 aa23.26■■□□□ 1.31
NSMCE4A-211ENST00000489266 EIF3BP55884 814 aaKnown RBP23.26■■□□□ 1.31
NSMCE4A-211ENST00000489266 STAG2Q8N3U4 1231 aa23.26■■□□□ 1.31
NSMCE4A-211ENST00000489266 ZNF513Q8N8E2 541 aaPredicted RBP23.26■■□□□ 1.31
NSMCE4A-211ENST00000489266 GBP7Q8N8V2 638 aaPredicted RBP23.26■■□□□ 1.31
NSMCE4A-211ENST00000489266 IFT74Q96LB3 600 aa23.26■■□□□ 1.31
NSMCE4A-211ENST00000489266 NSRP1Q9H0G5 558 aaKnown RBP23.26■■□□□ 1.31
NSMCE4A-211ENST00000489266 ZCWPW1Q9H0M4 648 aa23.26■■□□□ 1.31
NSMCE4A-211ENST00000489266 CHD4Q14839 1912 aa23.25■■□□□ 1.31
NSMCE4A-211ENST00000489266 ESCO1Q5FWF5 840 aa23.25■■□□□ 1.31
NSMCE4A-211ENST00000489266 GIGYF2Q6Y7W6 1299 aaKnown RBP23.25■■□□□ 1.31
NSMCE4A-211ENST00000489266 ASRGL1Q7L266 308 aa23.25■■□□□ 1.31
NSMCE4A-211ENST00000489266 SCFD2Q8WU76 684 aa23.25■■□□□ 1.31
NSMCE4A-211ENST00000489266 ZNF512BQ96KM6 892 aaPredicted RBP23.25■■□□□ 1.31
NSMCE4A-211ENST00000489266 ZKSCAN3Q9BRR0 538 aa23.25■■□□□ 1.31
NSMCE4A-211ENST00000489266 MTFR1LQ9H019 292 aa23.25■■□□□ 1.31
NSMCE4A-211ENST00000489266 NAPBQ9H115 298 aa23.25■■□□□ 1.31
NSMCE4A-211ENST00000489266 EPB41L4AQ9HCS5 686 aaPredicted RBP23.25■■□□□ 1.31
NSMCE4A-211ENST00000489266 PACSIN2Q9UNF0 486 aaPredicted RBP23.25■■□□□ 1.31
NSMCE4A-211ENST00000489266 SIK3Q9Y2K2 1263 aa23.25■■□□□ 1.31
NSMCE4A-211ENST00000489266 LRRC53A6NM62 1247 aa23.25■■□□□ 1.31
NSMCE4A-211ENST00000489266 KLRC4O43908 158 aa23.25■■□□□ 1.31
NSMCE4A-211ENST00000489266 SNX3O60493 162 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms