RNA–Protein interactions for RNA: ENST00000489240.1

C9orf16-203, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 3

Gene C9orf16, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-203ENST00000489240 SPECC1Q5M775 1068 aa20.51■□□□□ 0.87
C9orf16-203ENST00000489240 FBXO16Q8IX29 292 aaPredicted RBP20.51■□□□□ 0.87
C9orf16-203ENST00000489240 SCFD2Q8WU76 684 aa20.51■□□□□ 0.87
C9orf16-203ENST00000489240 VAV3Q9UKW4 847 aa20.51■□□□□ 0.87
C9orf16-203ENST00000489240 LOXHD1Q8IVV2 1947 aa20.51■□□□□ 0.87
C9orf16-203ENST00000489240 FAM237AA0A1B0GTK4 181 aa20.5■□□□□ 0.87
C9orf16-203ENST00000489240 POTEMA6NI47 508 aa20.5■□□□□ 0.87
C9orf16-203ENST00000489240 DHX15O43143 795 aaKnown RBP20.5■□□□□ 0.87
C9orf16-203ENST00000489240 ATP9AO75110 1047 aa20.5■□□□□ 0.87
C9orf16-203ENST00000489240 KCNA2P16389 499 aa20.5■□□□□ 0.87
C9orf16-203ENST00000489240 UBA7P41226 1012 aa20.5■□□□□ 0.87
C9orf16-203ENST00000489240 PRMT2P55345 433 aa20.5■□□□□ 0.87
C9orf16-203ENST00000489240 SPIRE1Q08AE8 756 aa20.5■□□□□ 0.87
C9orf16-203ENST00000489240 ITGB3BPQ13352 177 aaPredicted RBP20.5■□□□□ 0.87
C9orf16-203ENST00000489240 NEDD9Q14511 834 aa20.5■□□□□ 0.87
C9orf16-203ENST00000489240 TTLL4Q14679 1199 aa20.5■□□□□ 0.87
C9orf16-203ENST00000489240 CCL14Q16627 93 aa20.5■□□□□ 0.87
C9orf16-203ENST00000489240 OTOP1Q7RTM1 612 aa20.5■□□□□ 0.87
C9orf16-203ENST00000489240 ERMNQ8TAM6 284 aa20.5■□□□□ 0.87
C9orf16-203ENST00000489240 SYMPKQ92797 1274 aaKnown RBP20.5■□□□□ 0.87
C9orf16-203ENST00000489240 CCSER1Q9C0I3 900 aa20.5■□□□□ 0.87
C9orf16-203ENST00000489240 A0A1B0GVL5 298 aa20.49■□□□□ 0.87
C9orf16-203ENST00000489240 RBM47A0AV96 593 aaKnown RBP20.49■□□□□ 0.87
C9orf16-203ENST00000489240 SLC26A4O43511 780 aa20.49■□□□□ 0.87
C9orf16-203ENST00000489240 PFKFB1P16118 471 aa20.49■□□□□ 0.87
C9orf16-203ENST00000489240 KRT76Q01546 638 aa20.49■□□□□ 0.87
C9orf16-203ENST00000489240 FAM160A1Q05DH4 1040 aa20.49■□□□□ 0.87
C9orf16-203ENST00000489240 ACVR2BQ13705 512 aa20.49■□□□□ 0.87
C9orf16-203ENST00000489240 KRT79Q5XKE5 535 aa20.49■□□□□ 0.87
C9orf16-203ENST00000489240 NCAPH2Q6IBW4 605 aa20.49■□□□□ 0.87
C9orf16-203ENST00000489240 TAPT1Q6NXT6 567 aa20.49■□□□□ 0.87
C9orf16-203ENST00000489240 EPSTI1Q96J88 318 aa20.49■□□□□ 0.87
C9orf16-203ENST00000489240 PYM1Q9BRP8 204 aaKnown RBP20.49■□□□□ 0.87
C9orf16-203ENST00000489240 KATNBL1Q9H079 304 aa20.49■□□□□ 0.87
C9orf16-203ENST00000489240 GOLPH3LQ9H4A5 285 aa20.49■□□□□ 0.87
C9orf16-203ENST00000489240 FLRT1Q9NZU1 646 aa20.49■□□□□ 0.87
C9orf16-203ENST00000489240 CCDC39Q9UFE4 941 aa20.49■□□□□ 0.87
C9orf16-203ENST00000489240 TSKSQ9UJT2 592 aa20.49■□□□□ 0.87
C9orf16-203ENST00000489240 DDX41Q9UJV9 622 aaKnown RBP20.49■□□□□ 0.87
C9orf16-203ENST00000489240 HPSEQ9Y251 543 aa20.49■□□□□ 0.87
C9orf16-203ENST00000489240 MYH9P35579 1960 aaKnown RBP20.48■□□□□ 0.87
C9orf16-203ENST00000489240 DDX39AO00148 427 aaKnown RBP20.48■□□□□ 0.87
C9orf16-203ENST00000489240 IGHA2P01877 340 aa20.48■□□□□ 0.87
C9orf16-203ENST00000489240 TXNP10599 105 aaKnown RBP20.48■□□□□ 0.87
C9orf16-203ENST00000489240 CAP1Q01518 475 aa20.48■□□□□ 0.87
C9orf16-203ENST00000489240 MFSD14CQ5VZR4 134 aa20.48■□□□□ 0.87
C9orf16-203ENST00000489240 ZNF746Q6NUN9 644 aaPredicted RBP20.48■□□□□ 0.87
C9orf16-203ENST00000489240 B3GNT9Q6UX72 402 aa20.48■□□□□ 0.87
C9orf16-203ENST00000489240 USP49Q70CQ1 688 aa20.48■□□□□ 0.87
C9orf16-203ENST00000489240 CABP7Q86V35 215 aa20.48■□□□□ 0.87
C9orf16-203ENST00000489240 GPT2Q8TD30 523 aa20.48■□□□□ 0.87
C9orf16-203ENST00000489240 UNC45AQ9H3U1 944 aa20.48■□□□□ 0.87
C9orf16-203ENST00000489240 KCNH3Q9ULD8 1083 aa20.48■□□□□ 0.87
C9orf16-203ENST00000489240 PP2D1A8MPX8 630 aa20.47■□□□□ 0.87
C9orf16-203ENST00000489240 LIG1P18858 919 aa20.47■□□□□ 0.87
C9orf16-203ENST00000489240 UBA1P22314 1058 aaKnown RBP20.47■□□□□ 0.87
C9orf16-203ENST00000489240 CDC25AP30304 524 aa20.47■□□□□ 0.87
C9orf16-203ENST00000489240 SFNP31947 248 aa20.47■□□□□ 0.87
C9orf16-203ENST00000489240 SYKP43405 635 aa20.47■□□□□ 0.87
C9orf16-203ENST00000489240 NDUFA8P51970 172 aa20.47■□□□□ 0.87
C9orf16-203ENST00000489240 JAK3P52333 1124 aa20.47■□□□□ 0.87
C9orf16-203ENST00000489240 SP2Q02086 613 aa20.47■□□□□ 0.87
C9orf16-203ENST00000489240 KLHL40Q2TBA0 621 aa20.47■□□□□ 0.87
C9orf16-203ENST00000489240 HAUS3Q68CZ6 603 aa20.47■□□□□ 0.87
C9orf16-203ENST00000489240 IQSEC1Q6DN90 963 aa20.47■□□□□ 0.87
C9orf16-203ENST00000489240 CCDC62Q6P9F0 684 aa20.47■□□□□ 0.87
C9orf16-203ENST00000489240 MIER3Q7Z3K6 550 aa20.47■□□□□ 0.87
C9orf16-203ENST00000489240 RDM1Q8NG50 284 aa20.47■□□□□ 0.87
C9orf16-203ENST00000489240 SNX29Q8TEQ0 813 aa20.47■□□□□ 0.87
C9orf16-203ENST00000489240 CALML4Q96GE6 196 aa20.47■□□□□ 0.87
C9orf16-203ENST00000489240 JPH1Q9HDC5 661 aaPredicted RBP20.47■□□□□ 0.87
C9orf16-203ENST00000489240 PDGFCQ9NRA1 345 aa20.47■□□□□ 0.87
C9orf16-203ENST00000489240 SLC9A2Q9UBY0 812 aa20.47■□□□□ 0.87
C9orf16-203ENST00000489240 NRBP1Q9UHY1 535 aa20.47■□□□□ 0.87
C9orf16-203ENST00000489240 ZHX1Q9UKY1 873 aaPredicted RBP20.47■□□□□ 0.87
C9orf16-203ENST00000489240 KDM3AQ9Y4C1 1321 aa20.47■□□□□ 0.87
C9orf16-203ENST00000489240 CHMP2AO43633 222 aa20.46■□□□□ 0.87
C9orf16-203ENST00000489240 TRAK2O60296 914 aa20.46■□□□□ 0.87
C9orf16-203ENST00000489240 CYP2C19P33261 490 aa20.46■□□□□ 0.87
C9orf16-203ENST00000489240 EPHA7Q15375 998 aa20.46■□□□□ 0.87
C9orf16-203ENST00000489240 LY6KQ17RY6 165 aa20.46■□□□□ 0.87
C9orf16-203ENST00000489240 SMAP1Q8IYB5 467 aaPredicted RBP20.46■□□□□ 0.87
C9orf16-203ENST00000489240 FMR1NBQ8N0W7 255 aaPredicted RBP20.46■□□□□ 0.87
C9orf16-203ENST00000489240 ENGASEQ8NFI3 743 aa20.46■□□□□ 0.87
C9orf16-203ENST00000489240 RASSF8Q8NHQ8 419 aa20.46■□□□□ 0.87
C9orf16-203ENST00000489240 RAET1EQ8TD07 263 aa20.46■□□□□ 0.87
C9orf16-203ENST00000489240 CDK5RAP3Q96JB5 506 aa20.46■□□□□ 0.87
C9orf16-203ENST00000489240 WDR64B1ANS9 1081 aa20.45■□□□□ 0.86
C9orf16-203ENST00000489240 NKRFO15226 690 aaKnown RBP eCLIP20.45■□□□□ 0.86
C9orf16-203ENST00000489240 ARIH2O95376 493 aa20.45■□□□□ 0.86
C9orf16-203ENST00000489240 GGPS1O95749 300 aa20.45■□□□□ 0.86
C9orf16-203ENST00000489240 CCT6AP40227 531 aaKnown RBP20.45■□□□□ 0.86
C9orf16-203ENST00000489240 CYFIP1Q7L576 1253 aa20.45■□□□□ 0.86
C9orf16-203ENST00000489240 DHX37Q8IY37 1157 aaKnown RBP20.45■□□□□ 0.86
C9orf16-203ENST00000489240 NEK9Q8TD19 979 aa20.45■□□□□ 0.86
C9orf16-203ENST00000489240 TRIB2Q92519 343 aa20.45■□□□□ 0.86
C9orf16-203ENST00000489240 MMTAG2Q9BU76 263 aaKnown RBP20.45■□□□□ 0.86
C9orf16-203ENST00000489240 POLR3CQ9BUI4 534 aaPredicted RBP20.45■□□□□ 0.86
C9orf16-203ENST00000489240 NT5C3AQ9H0P0 336 aa20.45■□□□□ 0.86
C9orf16-203ENST00000489240 MLXIPQ9HAP2 919 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms