RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 SV2BQ7L1I2 683 aa11.23□□□□□ -0.61
USP11-211ENST00000489111 SH3RF1Q7Z6J0 888 aa11.23□□□□□ -0.61
USP11-211ENST00000489111 IFNL1Q8IU54 200 aa11.23□□□□□ -0.61
USP11-211ENST00000489111 FAM133AQ8N9E0 248 aa11.23□□□□□ -0.61
USP11-211ENST00000489111 FAM200AQ8TCP9 573 aa11.23□□□□□ -0.61
USP11-211ENST00000489111 LARP4BQ92615 738 aaKnown RBP11.23□□□□□ -0.61
USP11-211ENST00000489111 CCDC47Q96A33 483 aaKnown RBP11.23□□□□□ -0.61
USP11-211ENST00000489111 PNMA5Q96PV4 448 aa11.23□□□□□ -0.61
USP11-211ENST00000489111 LRRC27Q9C0I9 530 aa11.23□□□□□ -0.61
USP11-211ENST00000489111 UNC45AQ9H3U1 944 aa11.23□□□□□ -0.61
USP11-211ENST00000489111 RMND1Q9NWS8 449 aa11.23□□□□□ -0.61
USP11-211ENST00000489111 TUBE1Q9UJT0 475 aa11.23□□□□□ -0.61
USP11-211ENST00000489111 POTEB3A0JP26 581 aa11.22□□□□□ -0.61
USP11-211ENST00000489111 SOWAHBA6NEL2 793 aa11.22□□□□□ -0.61
USP11-211ENST00000489111 FAM155AB1AL88 458 aaPredicted RBP11.22□□□□□ -0.61
USP11-211ENST00000489111 STRNO43815 780 aa11.22□□□□□ -0.61
USP11-211ENST00000489111 EIF3JO75822 258 aaKnown RBP11.22□□□□□ -0.61
USP11-211ENST00000489111 SSBP05455 408 aaKnown RBP eCLIP11.22□□□□□ -0.61
USP11-211ENST00000489111 RPA1P27694 616 aa11.22□□□□□ -0.61
USP11-211ENST00000489111 NLRP12P59046 1061 aa11.22□□□□□ -0.61
USP11-211ENST00000489111 KRT76Q01546 638 aa11.22□□□□□ -0.61
USP11-211ENST00000489111 DPYDQ12882 1025 aa11.22□□□□□ -0.61
USP11-211ENST00000489111 ITGB3BPQ13352 177 aaPredicted RBP11.22□□□□□ -0.61
USP11-211ENST00000489111 DHX8Q14562 1220 aaKnown RBP11.22□□□□□ -0.61
USP11-211ENST00000489111 HYIQ5T013 277 aa11.22□□□□□ -0.61
USP11-211ENST00000489111 POTEBQ6S5H4 581 aa11.22□□□□□ -0.61
USP11-211ENST00000489111 OTOP1Q7RTM1 612 aa11.22□□□□□ -0.61
USP11-211ENST00000489111 MIER3Q7Z3K6 550 aa11.22□□□□□ -0.61
USP11-211ENST00000489111 ABRAQ8N0Z2 381 aa11.22□□□□□ -0.61
USP11-211ENST00000489111 TRIML1Q8N9V2 468 aa11.22□□□□□ -0.61
USP11-211ENST00000489111 NEK9Q8TD19 979 aa11.22□□□□□ -0.61
USP11-211ENST00000489111 RAD54LQ92698 747 aa11.22□□□□□ -0.61
USP11-211ENST00000489111 STAMQ92783 540 aa11.22□□□□□ -0.61
USP11-211ENST00000489111 EIF2AK1Q9BQI3 630 aaKnown RBP11.22□□□□□ -0.61
USP11-211ENST00000489111 POLR3CQ9BUI4 534 aaPredicted RBP11.22□□□□□ -0.61
USP11-211ENST00000489111 RBSNQ9H1K0 784 aa11.22□□□□□ -0.61
USP11-211ENST00000489111 DNAJC25Q9H1X3 360 aa11.22□□□□□ -0.61
USP11-211ENST00000489111 ZFYVE28Q9HCC9 887 aa11.22□□□□□ -0.61
USP11-211ENST00000489111 DACH1Q9UI36 760 aa11.22□□□□□ -0.61
USP11-211ENST00000489111 CPA4Q9UI42 421 aa11.22□□□□□ -0.61
USP11-211ENST00000489111 KIAA1024Q9UPX6 916 aa11.22□□□□□ -0.61
USP11-211ENST00000489111 SAMM50Q9Y512 469 aa11.22□□□□□ -0.61
USP11-211ENST00000489111 ASTN1O14525 1302 aa11.21□□□□□ -0.61
USP11-211ENST00000489111 ADGRA2Q96PE1 1338 aa11.21□□□□□ -0.61
USP11-211ENST00000489111 DNAJC25-GNG10A0A024R161 153 aa11.21□□□□□ -0.61
USP11-211ENST00000489111 LOC102724159A0A0B4J2E5 919 aa11.21□□□□□ -0.61
USP11-211ENST00000489111 POTEFA5A3E0 1075 aa11.21□□□□□ -0.61
USP11-211ENST00000489111 ASB14A6NK59 587 aa11.21□□□□□ -0.61
USP11-211ENST00000489111 EML1O00423 815 aa11.21□□□□□ -0.61
USP11-211ENST00000489111 MED24O75448 989 aa11.21□□□□□ -0.61
USP11-211ENST00000489111 EDNRBP24530 442 aa11.21□□□□□ -0.61
USP11-211ENST00000489111 ADORA2AP29274 412 aa11.21□□□□□ -0.61
USP11-211ENST00000489111 ZNF165P49910 485 aa11.21□□□□□ -0.61
USP11-211ENST00000489111 JAK3P52333 1124 aa11.21□□□□□ -0.61
USP11-211ENST00000489111 ASIC1P78348 528 aa11.21□□□□□ -0.61
USP11-211ENST00000489111 CYP4A11Q02928 519 aa11.21□□□□□ -0.61
USP11-211ENST00000489111 NOGQ13253 232 aa11.21□□□□□ -0.61
USP11-211ENST00000489111 PWP2Q15269 919 aaKnown RBP11.21□□□□□ -0.61
USP11-211ENST00000489111 EPHA7Q15375 998 aa11.21□□□□□ -0.61
USP11-211ENST00000489111 DPCR1Q3MIW9 517 aa11.21□□□□□ -0.61
USP11-211ENST00000489111 NT5DC1Q5TFE4 455 aa11.21□□□□□ -0.61
USP11-211ENST00000489111 POTEGQ6S5H5 508 aa11.21□□□□□ -0.61
USP11-211ENST00000489111 GPR142Q7Z601 462 aa11.21□□□□□ -0.61
USP11-211ENST00000489111 PLEKHH3Q7Z736 793 aa11.21□□□□□ -0.61
USP11-211ENST00000489111 KCTD17Q8N5Z5 321 aa11.21□□□□□ -0.61
USP11-211ENST00000489111 ANP32BQ92688 251 aaKnown RBP11.21□□□□□ -0.61
USP11-211ENST00000489111 GSDMAQ96QA5 445 aa11.21□□□□□ -0.61
USP11-211ENST00000489111 NUDT12Q9BQG2 462 aa11.21□□□□□ -0.61
USP11-211ENST00000489111 BLZF1Q9H2G9 400 aa11.21□□□□□ -0.61
USP11-211ENST00000489111 R3HDMLQ9H3Y0 253 aa11.21□□□□□ -0.61
USP11-211ENST00000489111 TUFT1Q9NNX1 390 aa11.21□□□□□ -0.61
USP11-211ENST00000489111 KBTBD4Q9NVX7 518 aa11.21□□□□□ -0.61
USP11-211ENST00000489111 MAN1B1Q9UKM7 699 aa11.21□□□□□ -0.61
USP11-211ENST00000489111 DNM3Q9UQ16 869 aa11.21□□□□□ -0.61
USP11-211ENST00000489111 NFASCO94856 1347 aa11.2□□□□□ -0.62
USP11-211ENST00000489111 A0A087WWV3 80 aa11.2□□□□□ -0.62
USP11-211ENST00000489111 WDR64B1ANS9 1081 aa11.2□□□□□ -0.62
USP11-211ENST00000489111 SPATA31C2B4DYI2 1134 aa11.2□□□□□ -0.62
USP11-211ENST00000489111 RPN1P04843 607 aaKnown RBP11.2□□□□□ -0.62
USP11-211ENST00000489111 MUTP22033 750 aa11.2□□□□□ -0.62
USP11-211ENST00000489111 CASP1P29466 404 aa11.2□□□□□ -0.62
USP11-211ENST00000489111 SFNP31947 248 aa11.2□□□□□ -0.62
USP11-211ENST00000489111 CUL4BQ13620 913 aa11.2□□□□□ -0.62
USP11-211ENST00000489111 MCM6Q14566 821 aa11.2□□□□□ -0.62
USP11-211ENST00000489111 ISM2Q6H9L7 571 aa11.2□□□□□ -0.62
USP11-211ENST00000489111 CYP4F22Q6NT55 531 aa11.2□□□□□ -0.62
USP11-211ENST00000489111 SEPT14Q6ZU15 432 aa11.2□□□□□ -0.62
USP11-211ENST00000489111 C11orf57Q6ZUT1 292 aaPredicted RBP11.2□□□□□ -0.62
USP11-211ENST00000489111 CATSPER3Q86XQ3 398 aa11.2□□□□□ -0.62
USP11-211ENST00000489111 TPH2Q8IWU9 490 aa11.2□□□□□ -0.62
USP11-211ENST00000489111 ZNF784Q8NCA9 323 aaPredicted RBP11.2□□□□□ -0.62
USP11-211ENST00000489111 RDM1Q8NG50 284 aa11.2□□□□□ -0.62
USP11-211ENST00000489111 SPATA20Q8TB22 786 aa11.2□□□□□ -0.62
USP11-211ENST00000489111 DYDC2Q96IM9 177 aa11.2□□□□□ -0.62
USP11-211ENST00000489111 MTRQ99707 1265 aa11.2□□□□□ -0.62
USP11-211ENST00000489111 CBX8Q9HC52 389 aa11.2□□□□□ -0.62
USP11-211ENST00000489111 JPH1Q9HDC5 661 aaPredicted RBP11.2□□□□□ -0.62
USP11-211ENST00000489111 CREBZFQ9NS37 354 aa11.2□□□□□ -0.62
USP11-211ENST00000489111 BMP2KQ9NSY1 1161 aaPredicted RBP11.2□□□□□ -0.62
USP11-211ENST00000489111 BLOC1S4Q9NUP1 217 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms