RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 PDIA3P30101 505 aaKnown RBP28.63■■■□□ 2.17
HMGN1-217ENST00000489072 HIC1Q14526 733 aa28.63■■■□□ 2.17
HMGN1-217ENST00000489072 NTRK3Q16288 839 aa28.63■■■□□ 2.17
HMGN1-217ENST00000489072 PKN1Q16512 942 aa28.63■■■□□ 2.17
HMGN1-217ENST00000489072 ZNF697Q5TEC3 545 aa28.63■■■□□ 2.17
HMGN1-217ENST00000489072 OTOP2Q7RTS6 562 aa28.63■■■□□ 2.17
HMGN1-217ENST00000489072 TEX2Q8IWB9 1127 aa28.63■■■□□ 2.17
HMGN1-217ENST00000489072 UPF3BQ9BZI7 483 aaKnown RBP28.63■■■□□ 2.17
HMGN1-217ENST00000489072 TMEM260Q9NX78 707 aa28.63■■■□□ 2.17
HMGN1-217ENST00000489072 CYP46A1Q9Y6A2 500 aa28.63■■■□□ 2.17
HMGN1-217ENST00000489072 GRXCR1A8MXD5 290 aa28.62■■■□□ 2.17
HMGN1-217ENST00000489072 IQCF3P0C7M6 154 aa28.62■■■□□ 2.17
HMGN1-217ENST00000489072 KCNA2P16389 499 aa28.62■■■□□ 2.17
HMGN1-217ENST00000489072 CLK2P49760 499 aaKnown RBP28.62■■■□□ 2.17
HMGN1-217ENST00000489072 ZNF200P98182 395 aaPredicted RBP28.62■■■□□ 2.17
HMGN1-217ENST00000489072 BFSP2Q13515 415 aa28.62■■■□□ 2.17
HMGN1-217ENST00000489072 RPUSD2Q8IZ73 545 aaKnown RBP28.62■■■□□ 2.17
HMGN1-217ENST00000489072 PHKBQ93100 1093 aa28.62■■■□□ 2.17
HMGN1-217ENST00000489072 GUCD1Q96NT3 240 aa28.62■■■□□ 2.17
HMGN1-217ENST00000489072 TTYH1Q9H313 450 aaPredicted RBP28.62■■■□□ 2.17
HMGN1-217ENST00000489072 EHMT1Q9H9B1 1298 aa28.62■■■□□ 2.17
HMGN1-217ENST00000489072 NCOA5Q9HCD5 579 aaKnown RBP28.62■■■□□ 2.17
HMGN1-217ENST00000489072 CDH23Q9H251 3354 aa28.62■■■□□ 2.17
HMGN1-217ENST00000489072 H3BRB1 525 aa28.61■■■□□ 2.17
HMGN1-217ENST00000489072 PRPF3O43395 683 aaKnown RBP28.61■■■□□ 2.17
HMGN1-217ENST00000489072 PPFIA3O75145 1194 aa28.61■■■□□ 2.17
HMGN1-217ENST00000489072 CCT2P78371 535 aaKnown RBP28.61■■■□□ 2.17
HMGN1-217ENST00000489072 SP4Q02446 784 aa28.61■■■□□ 2.17
HMGN1-217ENST00000489072 DEFB128Q7Z7B8 93 aa28.61■■■□□ 2.17
HMGN1-217ENST00000489072 RETREG2Q8NC44 543 aa28.61■■■□□ 2.17
HMGN1-217ENST00000489072 ANO3Q9BYT9 981 aa28.61■■■□□ 2.17
HMGN1-217ENST00000489072 TUT1Q9H6E5 874 aaKnown RBP28.61■■■□□ 2.17
HMGN1-217ENST00000489072 JADE2Q9NQC1 790 aa28.61■■■□□ 2.17
HMGN1-217ENST00000489072 GBF1Q92538 1859 aa28.61■■■□□ 2.17
HMGN1-217ENST00000489072 CHD9Q3L8U1 2897 aa28.6■■■□□ 2.17
HMGN1-217ENST00000489072 ADAMTS3O15072 1205 aa28.6■■■□□ 2.17
HMGN1-217ENST00000489072 FOSP01100 380 aaPredicted RBP28.6■■■□□ 2.17
HMGN1-217ENST00000489072 MTMR1Q13613 665 aa28.6■■■□□ 2.17
HMGN1-217ENST00000489072 TRIM50Q86XT4 487 aa28.6■■■□□ 2.17
HMGN1-217ENST00000489072 CAGE1Q8TC20 777 aa28.6■■■□□ 2.17
HMGN1-217ENST00000489072 CDHR1Q96JP9 859 aa28.6■■■□□ 2.17
HMGN1-217ENST00000489072 SEMA6BQ9H3T3 888 aa28.6■■■□□ 2.17
HMGN1-217ENST00000489072 PKD2L1Q9P0L9 805 aa28.6■■■□□ 2.17
HMGN1-217ENST00000489072 DNAJB2P25686 324 aa28.59■■■□□ 2.17
HMGN1-217ENST00000489072 RBL2Q08999 1139 aa28.59■■■□□ 2.17
HMGN1-217ENST00000489072 CCDC155Q8N6L0 562 aa28.59■■■□□ 2.17
HMGN1-217ENST00000489072 GIMAP8Q8ND71 665 aaPredicted RBP28.59■■■□□ 2.17
HMGN1-217ENST00000489072 CYP2W1Q8TAV3 490 aa28.59■■■□□ 2.17
HMGN1-217ENST00000489072 WNT8BQ93098 351 aa28.59■■■□□ 2.17
HMGN1-217ENST00000489072 LARP6Q9BRS8 491 aaKnown RBP28.59■■■□□ 2.17
HMGN1-217ENST00000489072 GLT8D2Q9H1C3 349 aa28.59■■■□□ 2.17
HMGN1-217ENST00000489072 PFKMP08237 780 aa28.58■■■□□ 2.17
HMGN1-217ENST00000489072 IFNAR1P17181 557 aa28.58■■■□□ 2.17
HMGN1-217ENST00000489072 RFC2P35250 354 aa28.58■■■□□ 2.17
HMGN1-217ENST00000489072 AP3B2Q13367 1082 aa28.58■■■□□ 2.17
HMGN1-217ENST00000489072 TRIM71Q2Q1W2 868 aaKnown RBP28.58■■■□□ 2.17
HMGN1-217ENST00000489072 AFAP1L1Q8TED9 768 aa28.58■■■□□ 2.17
HMGN1-217ENST00000489072 MXRA8Q9BRK3 442 aa28.58■■■□□ 2.17
HMGN1-217ENST00000489072 ESYT2A0FGR8 921 aa28.57■■■□□ 2.16
HMGN1-217ENST00000489072 SMIM10L2AP0DMW4 78 aa28.57■■■□□ 2.16
HMGN1-217ENST00000489072 SMIM10L2BP0DMW5 78 aa28.57■■■□□ 2.16
HMGN1-217ENST00000489072 HOXC8P31273 242 aa28.57■■■□□ 2.16
HMGN1-217ENST00000489072 SREBF1P36956 1147 aa28.57■■■□□ 2.16
HMGN1-217ENST00000489072 PBX2P40425 430 aa28.57■■■□□ 2.16
HMGN1-217ENST00000489072 PTK7Q13308 1070 aa28.57■■■□□ 2.16
HMGN1-217ENST00000489072 UTP14CQ5TAP6 766 aaKnown RBP28.57■■■□□ 2.16
HMGN1-217ENST00000489072 JAKMIP3Q5VZ66 844 aa28.57■■■□□ 2.16
HMGN1-217ENST00000489072 SLC26A6Q9BXS9 759 aa28.57■■■□□ 2.16
HMGN1-217ENST00000489072 RNF26Q9BY78 433 aaPredicted RBP28.57■■■□□ 2.16
HMGN1-217ENST00000489072 PBX4Q9BYU1 374 aa28.57■■■□□ 2.16
HMGN1-217ENST00000489072 ZMYND12Q9H0C1 365 aa28.57■■■□□ 2.16
HMGN1-217ENST00000489072 MTIF3Q9H2K0 278 aaKnown RBP28.57■■■□□ 2.16
HMGN1-217ENST00000489072 STXBP5LQ9Y2K9 1186 aa28.57■■■□□ 2.16
HMGN1-217ENST00000489072 MAFGO15525 162 aa28.56■■■□□ 2.16
HMGN1-217ENST00000489072 CKBP12277 381 aa28.56■■■□□ 2.16
HMGN1-217ENST00000489072 SELPP16109 830 aa28.56■■■□□ 2.16
HMGN1-217ENST00000489072 GPNMBQ14956 572 aa28.56■■■□□ 2.16
HMGN1-217ENST00000489072 KCNH7Q9NS40 1196 aa28.56■■■□□ 2.16
HMGN1-217ENST00000489072 PDRG1Q9NUG6 133 aa28.56■■■□□ 2.16
HMGN1-217ENST00000489072 KAT6AQ92794 2004 aa28.55■■■□□ 2.16
HMGN1-217ENST00000489072 GSTTP1A0A1W2PQM5 241 aa28.55■■■□□ 2.16
HMGN1-217ENST00000489072 C17orf102A2RUQ5 167 aa28.55■■■□□ 2.16
HMGN1-217ENST00000489072 RBAK-RBAKDNI3L0D1 243 aa28.55■■■□□ 2.16
HMGN1-217ENST00000489072 AKAP17AQ02040 695 aaKnown RBP28.55■■■□□ 2.16
HMGN1-217ENST00000489072 LRRC8DQ7L1W4 858 aa28.55■■■□□ 2.16
HMGN1-217ENST00000489072 ZNF274Q96GC6 653 aaPredicted RBP28.55■■■□□ 2.16
HMGN1-217ENST00000489072 RNPEPQ9H4A4 650 aa28.55■■■□□ 2.16
HMGN1-217ENST00000489072 MYO9BQ13459 2157 aa28.55■■■□□ 2.16
HMGN1-217ENST00000489072 TMEM265A0A087WTH1 108 aa28.54■■■□□ 2.16
HMGN1-217ENST00000489072 ZBBXA8MT70 800 aa28.54■■■□□ 2.16
HMGN1-217ENST00000489072 ARP10275 920 aa28.54■■■□□ 2.16
HMGN1-217ENST00000489072 TCF7P36402 384 aaPredicted RBP28.54■■■□□ 2.16
HMGN1-217ENST00000489072 CEP55Q53EZ4 464 aa28.54■■■□□ 2.16
HMGN1-217ENST00000489072 TRAF7Q6Q0C0 670 aa28.54■■■□□ 2.16
HMGN1-217ENST00000489072 SERINC5Q86VE9 423 aa28.54■■■□□ 2.16
HMGN1-217ENST00000489072 ARHGAP4P98171 946 aa28.53■■■□□ 2.16
HMGN1-217ENST00000489072 CCDC12Q8WUD4 166 aaPredicted RBP28.53■■■□□ 2.16
HMGN1-217ENST00000489072 CRYGNQ8WXF5 182 aa28.53■■■□□ 2.16
HMGN1-217ENST00000489072 SEPT1Q8WYJ6 367 aa28.53■■■□□ 2.16
HMGN1-217ENST00000489072 TIFAQ96CG3 184 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms