RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 ATP2A2P16615 1042 aaKnown RBP26.41■■□□□ 1.82
COL9A3-213ENST00000489045 FGD1P98174 961 aa26.41■■□□□ 1.82
COL9A3-213ENST00000489045 JAKMIP1Q96N16 626 aaKnown RBP26.41■■□□□ 1.82
COL9A3-213ENST00000489045 GPR20Q99678 358 aa26.41■■□□□ 1.82
COL9A3-213ENST00000489045 TUT1Q9H6E5 874 aaKnown RBP26.41■■□□□ 1.82
COL9A3-213ENST00000489045 NAP1L2Q9ULW6 460 aaPredicted RBP26.41■■□□□ 1.82
COL9A3-213ENST00000489045 PCDHA6Q9UN73 950 aa26.41■■□□□ 1.82
COL9A3-213ENST00000489045 PCDHA8Q9Y5H6 950 aa26.41■■□□□ 1.82
COL9A3-213ENST00000489045 UNC80Q8N2C7 3258 aa26.4■■□□□ 1.82
COL9A3-213ENST00000489045 NEFLP07196 543 aa26.4■■□□□ 1.82
COL9A3-213ENST00000489045 NAPAP54920 295 aa26.4■■□□□ 1.82
COL9A3-213ENST00000489045 SP4Q02446 784 aa26.4■■□□□ 1.82
COL9A3-213ENST00000489045 TYW1BQ6NUM6 668 aa26.4■■□□□ 1.82
COL9A3-213ENST00000489045 WNT8BQ93098 351 aa26.4■■□□□ 1.82
COL9A3-213ENST00000489045 GPRASP2Q96D09 838 aa26.4■■□□□ 1.82
COL9A3-213ENST00000489045 SENP7Q9BQF6 1050 aa26.4■■□□□ 1.82
COL9A3-213ENST00000489045 FAM217BQ9NTX9 383 aaPredicted RBP26.4■■□□□ 1.82
COL9A3-213ENST00000489045 TELO2Q9Y4R8 837 aa26.4■■□□□ 1.82
COL9A3-213ENST00000489045 V9GY48 417 aaPredicted RBP26.4■■□□□ 1.82
COL9A3-213ENST00000489045 CDC27P30260 824 aa26.39■■□□□ 1.82
COL9A3-213ENST00000489045 RCAN1P53805 252 aa26.39■■□□□ 1.82
COL9A3-213ENST00000489045 GPNMBQ14956 572 aa26.39■■□□□ 1.82
COL9A3-213ENST00000489045 TRIM71Q2Q1W2 868 aaKnown RBP26.39■■□□□ 1.82
COL9A3-213ENST00000489045 PPP1R18Q6NYC8 613 aa26.39■■□□□ 1.82
COL9A3-213ENST00000489045 USP26Q9BXU7 913 aa26.39■■□□□ 1.82
COL9A3-213ENST00000489045 SLC28A3Q9HAS3 691 aa26.39■■□□□ 1.82
COL9A3-213ENST00000489045 KAT6AQ92794 2004 aa26.38■■□□□ 1.81
COL9A3-213ENST00000489045 REC8O95072 547 aa26.38■■□□□ 1.81
COL9A3-213ENST00000489045 MYOGP15173 224 aa26.38■■□□□ 1.81
COL9A3-213ENST00000489045 ITGB5P18084 799 aa26.38■■□□□ 1.81
COL9A3-213ENST00000489045 APOBRQ0VD83 1088 aa26.38■■□□□ 1.81
COL9A3-213ENST00000489045 BLOC1S2Q6QNY1 142 aa26.38■■□□□ 1.81
COL9A3-213ENST00000489045 Q6ZUG5 572 aa26.38■■□□□ 1.81
COL9A3-213ENST00000489045 TRIM50Q86XT4 487 aa26.38■■□□□ 1.81
COL9A3-213ENST00000489045 PRDM12Q9H4Q4 367 aa26.38■■□□□ 1.81
COL9A3-213ENST00000489045 PCDHA11Q9Y5I1 949 aa26.38■■□□□ 1.81
COL9A3-213ENST00000489045 UBIAD1Q9Y5Z9 338 aa26.38■■□□□ 1.81
COL9A3-213ENST00000489045 C17orf102A2RUQ5 167 aa26.37■■□□□ 1.81
COL9A3-213ENST00000489045 hCG_1984214I3L0E3 225 aa26.37■■□□□ 1.81
COL9A3-213ENST00000489045 ATP9AO75110 1047 aa26.37■■□□□ 1.81
COL9A3-213ENST00000489045 SMIM10L2AP0DMW4 78 aa26.37■■□□□ 1.81
COL9A3-213ENST00000489045 SMIM10L2BP0DMW5 78 aa26.37■■□□□ 1.81
COL9A3-213ENST00000489045 KCNA2P16389 499 aa26.37■■□□□ 1.81
COL9A3-213ENST00000489045 METAP2P50579 478 aaKnown RBP eCLIP26.37■■□□□ 1.81
COL9A3-213ENST00000489045 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.37■■□□□ 1.81
COL9A3-213ENST00000489045 ZNF713Q8N859 430 aaPredicted RBP26.37■■□□□ 1.81
COL9A3-213ENST00000489045 GIMAP8Q8ND71 665 aaPredicted RBP26.37■■□□□ 1.81
COL9A3-213ENST00000489045 BRF1Q92994 677 aa26.37■■□□□ 1.81
COL9A3-213ENST00000489045 CDHR1Q96JP9 859 aa26.37■■□□□ 1.81
COL9A3-213ENST00000489045 SLC9A7Q96T83 725 aa26.37■■□□□ 1.81
COL9A3-213ENST00000489045 EHMT1Q9H9B1 1298 aa26.37■■□□□ 1.81
COL9A3-213ENST00000489045 RIC8AQ9NPQ8 531 aa26.37■■□□□ 1.81
COL9A3-213ENST00000489045 A0A0C4DFX4 3053 aa26.37■■□□□ 1.81
COL9A3-213ENST00000489045 STXBP3O00186 592 aa26.36■■□□□ 1.81
COL9A3-213ENST00000489045 NBNO60934 754 aa26.36■■□□□ 1.81
COL9A3-213ENST00000489045 BAIAP3O94812 1187 aa26.36■■□□□ 1.81
COL9A3-213ENST00000489045 PARNO95453 639 aaKnown RBP26.36■■□□□ 1.81
COL9A3-213ENST00000489045 HOXC8P31273 242 aa26.36■■□□□ 1.81
COL9A3-213ENST00000489045 ADCY7P51828 1080 aa26.36■■□□□ 1.81
COL9A3-213ENST00000489045 MTMR1Q13613 665 aa26.36■■□□□ 1.81
COL9A3-213ENST00000489045 ZNF618Q5T7W0 954 aa26.36■■□□□ 1.81
COL9A3-213ENST00000489045 UTP14CQ5TAP6 766 aaKnown RBP26.36■■□□□ 1.81
COL9A3-213ENST00000489045 TRAF7Q6Q0C0 670 aa26.36■■□□□ 1.81
COL9A3-213ENST00000489045 SERINC5Q86VE9 423 aa26.36■■□□□ 1.81
COL9A3-213ENST00000489045 ATP6V0A1Q93050 837 aa26.36■■□□□ 1.81
COL9A3-213ENST00000489045 CXCL10P02778 98 aa26.35■■□□□ 1.81
COL9A3-213ENST00000489045 ADD1P35611 737 aaKnown RBP26.35■■□□□ 1.81
COL9A3-213ENST00000489045 PPP2R2DQ66LE6 453 aa26.35■■□□□ 1.81
COL9A3-213ENST00000489045 PGBD1Q96JS3 809 aa26.35■■□□□ 1.81
COL9A3-213ENST00000489045 GAS2L1Q99501 681 aaPredicted RBP26.35■■□□□ 1.81
COL9A3-213ENST00000489045 RNPEPQ9H4A4 650 aa26.35■■□□□ 1.81
COL9A3-213ENST00000489045 BARHL2Q9NY43 387 aa26.35■■□□□ 1.81
COL9A3-213ENST00000489045 PKD2L1Q9P0L9 805 aa26.35■■□□□ 1.81
COL9A3-213ENST00000489045 ZNF215Q9UL58 517 aaPredicted RBP26.35■■□□□ 1.81
COL9A3-213ENST00000489045 CHD7Q9P2D1 2997 aa26.35■■□□□ 1.81
COL9A3-213ENST00000489045 RPS6KB1P23443 525 aa26.34■■□□□ 1.81
COL9A3-213ENST00000489045 CNKSR3Q6P9H4 555 aa26.34■■□□□ 1.81
COL9A3-213ENST00000489045 PHOSPHO2Q8TCD6 241 aa26.34■■□□□ 1.81
COL9A3-213ENST00000489045 JADE2Q9NQC1 790 aa26.34■■□□□ 1.81
COL9A3-213ENST00000489045 NID2Q14112 1375 aa26.33■■□□□ 1.81
COL9A3-213ENST00000489045 CUL9Q8IWT3 2517 aa26.33■■□□□ 1.81
COL9A3-213ENST00000489045 CCDC196A0A1B0GTZ2 297 aa26.33■■□□□ 1.81
COL9A3-213ENST00000489045 SMCO2A6NFE2 343 aa26.33■■□□□ 1.81
COL9A3-213ENST00000489045 RBAK-RBAKDNI3L0D1 243 aa26.33■■□□□ 1.81
COL9A3-213ENST00000489045 TREHO43280 583 aa26.33■■□□□ 1.81
COL9A3-213ENST00000489045 TCF7P36402 384 aaPredicted RBP26.33■■□□□ 1.81
COL9A3-213ENST00000489045 KCNJ6P48051 423 aa26.33■■□□□ 1.81
COL9A3-213ENST00000489045 MBTPS1Q14703 1052 aa26.33■■□□□ 1.81
COL9A3-213ENST00000489045 TEX2Q8IWB9 1127 aa26.33■■□□□ 1.81
COL9A3-213ENST00000489045 ANO3Q9BYT9 981 aa26.33■■□□□ 1.81
COL9A3-213ENST00000489045 SETD4Q9NVD3 440 aa26.33■■□□□ 1.81
COL9A3-213ENST00000489045 PRUNE2Q8WUY3 3088 aa26.33■■□□□ 1.81
COL9A3-213ENST00000489045 DLL1O00548 723 aa26.32■■□□□ 1.8
COL9A3-213ENST00000489045 FOSP01100 380 aaPredicted RBP26.32■■□□□ 1.8
COL9A3-213ENST00000489045 PSMA5P28066 241 aa26.32■■□□□ 1.8
COL9A3-213ENST00000489045 THPOP40225 353 aa26.32■■□□□ 1.8
COL9A3-213ENST00000489045 WDR5P61964 334 aaKnown RBP26.32■■□□□ 1.8
COL9A3-213ENST00000489045 TCTN1Q2MV58 587 aa26.32■■□□□ 1.8
COL9A3-213ENST00000489045 HERC6Q8IVU3 1022 aa26.32■■□□□ 1.8
COL9A3-213ENST00000489045 FBXL16Q8N461 479 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms