RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 SREBF1P36956 1147 aa16.29■□□□□ 0.2
BRCA1-218ENST00000489037 SP4Q02446 784 aa16.29■□□□□ 0.2
BRCA1-218ENST00000489037 SCRN1Q12765 414 aa16.29■□□□□ 0.2
BRCA1-218ENST00000489037 KIAA0753Q2KHM9 967 aa16.29■□□□□ 0.2
BRCA1-218ENST00000489037 C8orf34Q49A92 452 aa16.29■□□□□ 0.2
BRCA1-218ENST00000489037 CEP55Q53EZ4 464 aa16.29■□□□□ 0.2
BRCA1-218ENST00000489037 SESTD1Q86VW0 696 aa16.29■□□□□ 0.2
BRCA1-218ENST00000489037 FAM177A1Q8N128 213 aaPredicted RBP16.29■□□□□ 0.2
BRCA1-218ENST00000489037 CCDC155Q8N6L0 562 aa16.29■□□□□ 0.2
BRCA1-218ENST00000489037 RETREG2Q8NC44 543 aa16.29■□□□□ 0.2
BRCA1-218ENST00000489037 KAT2BQ92831 832 aa16.29■□□□□ 0.2
BRCA1-218ENST00000489037 SDF4Q9BRK5 362 aa16.29■□□□□ 0.2
BRCA1-218ENST00000489037 TRMT13Q9NUP7 481 aaKnown RBP16.29■□□□□ 0.2
BRCA1-218ENST00000489037 CYP2C18P33260 490 aa16.28■□□□□ 0.2
BRCA1-218ENST00000489037 FXR1P51114 621 aaKnown RBP eCLIP16.28■□□□□ 0.2
BRCA1-218ENST00000489037 ARHGAP4P98171 946 aa16.28■□□□□ 0.2
BRCA1-218ENST00000489037 PTGISQ16647 500 aa16.28■□□□□ 0.2
BRCA1-218ENST00000489037 WASF1Q92558 559 aa16.28■□□□□ 0.2
BRCA1-218ENST00000489037 GPR20Q99678 358 aa16.28■□□□□ 0.2
BRCA1-218ENST00000489037 C22orf23Q9BZE7 217 aa16.28■□□□□ 0.2
BRCA1-218ENST00000489037 PKD2L1Q9P0L9 805 aa16.28■□□□□ 0.2
BRCA1-218ENST00000489037 ZNF215Q9UL58 517 aaPredicted RBP16.28■□□□□ 0.2
BRCA1-218ENST00000489037 H3BRB1 525 aa16.27■□□□□ 0.2
BRCA1-218ENST00000489037 LGALS2P05162 132 aa16.27■□□□□ 0.2
BRCA1-218ENST00000489037 CYP2C9P11712 490 aa16.27■□□□□ 0.2
BRCA1-218ENST00000489037 KCNA2P16389 499 aa16.27■□□□□ 0.2
BRCA1-218ENST00000489037 BFSP2Q13515 415 aa16.27■□□□□ 0.2
BRCA1-218ENST00000489037 LRIT3Q3SXY7 679 aa16.27■□□□□ 0.2
BRCA1-218ENST00000489037 UTP14CQ5TAP6 766 aaKnown RBP16.27■□□□□ 0.2
BRCA1-218ENST00000489037 GALNT17Q6IS24 598 aa16.27■□□□□ 0.2
BRCA1-218ENST00000489037 NIPA1Q7RTP0 329 aa16.27■□□□□ 0.2
BRCA1-218ENST00000489037 RPUSD2Q8IZ73 545 aaKnown RBP16.27■□□□□ 0.2
BRCA1-218ENST00000489037 PPP1R13LQ8WUF5 828 aa16.27■□□□□ 0.2
BRCA1-218ENST00000489037 SEPT1Q8WYJ6 367 aa16.27■□□□□ 0.2
BRCA1-218ENST00000489037 NOC4LQ9BVI4 516 aaKnown RBP16.27■□□□□ 0.2
BRCA1-218ENST00000489037 TUT1Q9H6E5 874 aaKnown RBP16.27■□□□□ 0.2
BRCA1-218ENST00000489037 BCAS3Q9H6U6 928 aa16.27■□□□□ 0.2
BRCA1-218ENST00000489037 KCNH7Q9NS40 1196 aa16.27■□□□□ 0.2
BRCA1-218ENST00000489037 HDAC6Q9UBN7 1215 aa16.27■□□□□ 0.2
BRCA1-218ENST00000489037 STK36Q9NRP7 1315 aa16.26■□□□□ 0.19
BRCA1-218ENST00000489037 HAS3O00219 553 aa16.26■□□□□ 0.19
BRCA1-218ENST00000489037 MEIS1O00470 390 aa16.26■□□□□ 0.19
BRCA1-218ENST00000489037 ATP9AO75110 1047 aa16.26■□□□□ 0.19
BRCA1-218ENST00000489037 CYP3A4P08684 503 aa16.26■□□□□ 0.19
BRCA1-218ENST00000489037 CCL23P55773 120 aa16.26■□□□□ 0.19
BRCA1-218ENST00000489037 SHHQ15465 462 aa16.26■□□□□ 0.19
BRCA1-218ENST00000489037 PLA2G4DQ86XP0 818 aa16.26■□□□□ 0.19
BRCA1-218ENST00000489037 C16orf70Q9BSU1 422 aa16.26■□□□□ 0.19
BRCA1-218ENST00000489037 JPH1Q9HDC5 661 aaPredicted RBP16.26■□□□□ 0.19
BRCA1-218ENST00000489037 GTF2IRD1Q9UHL9 959 aa16.26■□□□□ 0.19
BRCA1-218ENST00000489037 TCEAL9Q9UHQ7 104 aa16.26■□□□□ 0.19
BRCA1-218ENST00000489037 PCDHA4Q9UN74 947 aa16.26■□□□□ 0.19
BRCA1-218ENST00000489037 NFASCO94856 1347 aa16.25■□□□□ 0.19
BRCA1-218ENST00000489037 GNAT1P11488 350 aa16.25■□□□□ 0.19
BRCA1-218ENST00000489037 CSF2RAP15509 400 aa16.25■□□□□ 0.19
BRCA1-218ENST00000489037 TCF7P36402 384 aaPredicted RBP16.25■□□□□ 0.19
BRCA1-218ENST00000489037 SETQ01105 290 aaPredicted RBP16.25■□□□□ 0.19
BRCA1-218ENST00000489037 ME3Q16798 604 aa16.25■□□□□ 0.19
BRCA1-218ENST00000489037 GDF6Q6KF10 455 aaPredicted RBP16.25■□□□□ 0.19
BRCA1-218ENST00000489037 PSRC1Q6PGN9 363 aaPredicted RBP16.25■□□□□ 0.19
BRCA1-218ENST00000489037 BLIDQ8IZY5 108 aa16.25■□□□□ 0.19
BRCA1-218ENST00000489037 CYP2W1Q8TAV3 490 aa16.25■□□□□ 0.19
BRCA1-218ENST00000489037 CAGE1Q8TC20 777 aa16.25■□□□□ 0.19
BRCA1-218ENST00000489037 RASGRP4Q8TDF6 673 aa16.25■□□□□ 0.19
BRCA1-218ENST00000489037 RNPC3Q96LT9 517 aaKnown RBP16.25■□□□□ 0.19
BRCA1-218ENST00000489037 MTIF3Q9H2K0 278 aaKnown RBP16.25■□□□□ 0.19
BRCA1-218ENST00000489037 IL23AQ9NPF7 189 aa16.25■□□□□ 0.19
BRCA1-218ENST00000489037 ORC3Q9UBD5 711 aaPredicted RBP16.25■□□□□ 0.19
BRCA1-218ENST00000489037 SLC9A2Q9UBY0 812 aa16.25■□□□□ 0.19
BRCA1-218ENST00000489037 MYH9P35579 1960 aaKnown RBP16.24■□□□□ 0.19
BRCA1-218ENST00000489037 C17orf102A2RUQ5 167 aa16.24■□□□□ 0.19
BRCA1-218ENST00000489037 PITPNM1O00562 1244 aa16.24■□□□□ 0.19
BRCA1-218ENST00000489037 ARP10275 920 aa16.24■□□□□ 0.19
BRCA1-218ENST00000489037 C9orf50Q5SZB4 431 aa16.24■□□□□ 0.19
BRCA1-218ENST00000489037 NECAB1Q8N987 351 aa16.24■□□□□ 0.19
BRCA1-218ENST00000489037 GLG1Q92896 1179 aa16.24■□□□□ 0.19
BRCA1-218ENST00000489037 TNPO1Q92973 898 aaKnown RBP16.24■□□□□ 0.19
BRCA1-218ENST00000489037 GTF3C6Q969F1 213 aa16.24■□□□□ 0.19
BRCA1-218ENST00000489037 SMARCAD1Q9H4L7 1026 aa16.24■□□□□ 0.19
BRCA1-218ENST00000489037 AZI2Q9H6S1 392 aa16.24■□□□□ 0.19
BRCA1-218ENST00000489037 AGO4Q9HCK5 861 aaKnown RBP16.24■□□□□ 0.19
BRCA1-218ENST00000489037 LIMCH1Q9UPQ0 1083 aa16.24■□□□□ 0.19
BRCA1-218ENST00000489037 RFC2P35250 354 aa16.23■□□□□ 0.19
BRCA1-218ENST00000489037 USP11P51784 963 aa16.23■□□□□ 0.19
BRCA1-218ENST00000489037 PTK7Q13308 1070 aa16.23■□□□□ 0.19
BRCA1-218ENST00000489037 DAGLBQ8NCG7 672 aa16.23■□□□□ 0.19
BRCA1-218ENST00000489037 ZSCAN31Q96LW9 406 aaPredicted RBP16.23■□□□□ 0.19
BRCA1-218ENST00000489037 AIFM3Q96NN9 605 aa16.23■□□□□ 0.19
BRCA1-218ENST00000489037 ZNF577Q9BSK1 485 aa16.23■□□□□ 0.19
BRCA1-218ENST00000489037 ERAP1Q9NZ08 941 aa16.23■□□□□ 0.19
BRCA1-218ENST00000489037 UMODL1Q5DID0 1318 aa16.22■□□□□ 0.19
BRCA1-218ENST00000489037 GSTTP1A0A1W2PQM5 241 aa16.22■□□□□ 0.19
BRCA1-218ENST00000489037 FAM86B1E9PN63 330 aa16.22■□□□□ 0.19
BRCA1-218ENST00000489037 FGBP02675 491 aa16.22■□□□□ 0.19
BRCA1-218ENST00000489037 PFKMP08237 780 aa16.22■□□□□ 0.19
BRCA1-218ENST00000489037 FAM86B2P0C5J1 330 aa16.22■□□□□ 0.19
BRCA1-218ENST00000489037 SMIM10L2AP0DMW4 78 aa16.22■□□□□ 0.19
BRCA1-218ENST00000489037 SMIM10L2BP0DMW5 78 aa16.22■□□□□ 0.19
BRCA1-218ENST00000489037 ACRP10323 421 aa16.22■□□□□ 0.19
BRCA1-218ENST00000489037 RBM25P49756 843 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms