RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 MBOAT7Q96N66 472 aa17.23■□□□□ 0.35
FDPS-213ENST00000489003 UIMC1Q96RL1 719 aa17.23■□□□□ 0.35
FDPS-213ENST00000489003 FOXP1Q9H334 677 aaPredicted RBP17.23■□□□□ 0.35
FDPS-213ENST00000489003 KPNA6O60684 536 aa17.22■□□□□ 0.35
FDPS-213ENST00000489003 PPFIA4O75335 1185 aa17.22■□□□□ 0.35
FDPS-213ENST00000489003 TDP2O95551 362 aa17.22■□□□□ 0.35
FDPS-213ENST00000489003 ITGB3BPQ13352 177 aaPredicted RBP17.22■□□□□ 0.35
FDPS-213ENST00000489003 LETM2Q2VYF4 491 aa17.22■□□□□ 0.35
FDPS-213ENST00000489003 Q4G0T1 1027 aa17.22■□□□□ 0.35
FDPS-213ENST00000489003 NEK8Q86SG6 692 aa17.22■□□□□ 0.35
FDPS-213ENST00000489003 PPTC7Q8NI37 304 aa17.22■□□□□ 0.35
FDPS-213ENST00000489003 POLR3EQ9NVU0 708 aa17.22■□□□□ 0.35
FDPS-213ENST00000489003 ELP1O95163 1332 aa17.21■□□□□ 0.35
FDPS-213ENST00000489003 KIF28PB7ZC32 967 aa17.21■□□□□ 0.35
FDPS-213ENST00000489003 MSH4O15457 936 aa17.21■□□□□ 0.35
FDPS-213ENST00000489003 DHX15O43143 795 aaKnown RBP17.21■□□□□ 0.35
FDPS-213ENST00000489003 CABYRO75952 493 aa17.21■□□□□ 0.35
FDPS-213ENST00000489003 HOXD8P13378 290 aaPredicted RBP17.21■□□□□ 0.35
FDPS-213ENST00000489003 ATN1P54259 1190 aaPredicted RBP17.21■□□□□ 0.35
FDPS-213ENST00000489003 PURAQ00577 322 aaKnown RBP17.21■□□□□ 0.35
FDPS-213ENST00000489003 MOXD1Q6UVY6 613 aa17.21■□□□□ 0.35
FDPS-213ENST00000489003 VTI1AQ96AJ9 217 aa17.21■□□□□ 0.35
FDPS-213ENST00000489003 GLT1D1Q96MS3 346 aa17.21■□□□□ 0.35
FDPS-213ENST00000489003 GPR20Q99678 358 aa17.21■□□□□ 0.35
FDPS-213ENST00000489003 STARD7Q9NQZ5 370 aa17.21■□□□□ 0.35
FDPS-213ENST00000489003 NFASCO94856 1347 aa17.21■□□□□ 0.34
FDPS-213ENST00000489003 GSTTP1A0A1W2PQM5 241 aa17.2■□□□□ 0.34
FDPS-213ENST00000489003 H3BQV1 296 aa17.2■□□□□ 0.34
FDPS-213ENST00000489003 U2AF2P26368 475 aaKnown RBP eCLIP17.2■□□□□ 0.344e-6■□□□□ 10.9
FDPS-213ENST00000489003 SETQ01105 290 aaPredicted RBP17.2■□□□□ 0.34
FDPS-213ENST00000489003 MLLT1Q03111 559 aaPredicted RBP17.2■□□□□ 0.34
FDPS-213ENST00000489003 DGKDQ16760 1214 aa17.2■□□□□ 0.34
FDPS-213ENST00000489003 LRRC26Q2I0M4 334 aa17.2■□□□□ 0.34
FDPS-213ENST00000489003 PPP4R3AQ6IN85 833 aa17.2■□□□□ 0.34
FDPS-213ENST00000489003 ZNF577Q9BSK1 485 aa17.2■□□□□ 0.34
FDPS-213ENST00000489003 MTG1Q9BT17 334 aaPredicted RBP17.2■□□□□ 0.34
FDPS-213ENST00000489003 GRIN2DO15399 1336 aa17.2■□□□□ 0.34
FDPS-213ENST00000489003 IPO5O00410 1097 aaKnown RBP17.19■□□□□ 0.34
FDPS-213ENST00000489003 WNT7AO00755 349 aa17.19■□□□□ 0.34
FDPS-213ENST00000489003 CCNT1O60563 726 aaKnown RBP17.19■□□□□ 0.34
FDPS-213ENST00000489003 CDK7P50613 346 aa17.19■□□□□ 0.34
FDPS-213ENST00000489003 PSMC6P62333 389 aa17.19■□□□□ 0.34
FDPS-213ENST00000489003 SP4Q02446 784 aa17.19■□□□□ 0.34
FDPS-213ENST00000489003 SEPT1Q8WYJ6 367 aa17.19■□□□□ 0.34
FDPS-213ENST00000489003 KAT2BQ92831 832 aa17.19■□□□□ 0.34
FDPS-213ENST00000489003 SLC5A5Q92911 643 aa17.19■□□□□ 0.34
FDPS-213ENST00000489003 SDF4Q9BRK5 362 aa17.19■□□□□ 0.34
FDPS-213ENST00000489003 HTATIP2Q9BUP3 242 aa17.19■□□□□ 0.34
FDPS-213ENST00000489003 TBC1D22BQ9NU19 505 aa17.19■□□□□ 0.34
FDPS-213ENST00000489003 DDX25Q9UHL0 483 aaKnown RBP17.19■□□□□ 0.34
FDPS-213ENST00000489003 ALPK3Q96L96 1907 aa17.19■□□□□ 0.34
FDPS-213ENST00000489003 DDX39AO00148 427 aaKnown RBP17.18■□□□□ 0.34
FDPS-213ENST00000489003 ARVCFO00192 962 aa17.18■□□□□ 0.34
FDPS-213ENST00000489003 NOP56O00567 594 aaKnown RBP17.18■□□□□ 0.34
FDPS-213ENST00000489003 SLC37A4O43826 429 aa17.18■□□□□ 0.34
FDPS-213ENST00000489003 ATP2B1P20020 1258 aa17.18■□□□□ 0.34
FDPS-213ENST00000489003 ITGA7Q13683 1181 aa17.18■□□□□ 0.34
FDPS-213ENST00000489003 GNL2Q13823 731 aaKnown RBP17.18■□□□□ 0.34
FDPS-213ENST00000489003 SNX17Q15036 470 aa17.18■□□□□ 0.34
FDPS-213ENST00000489003 C1orf53Q5VUE5 145 aa17.18■□□□□ 0.34
FDPS-213ENST00000489003 MCTP1Q6DN14 999 aa17.18■□□□□ 0.34
FDPS-213ENST00000489003 NOSTRINQ8IVI9 506 aa17.18■□□□□ 0.34
FDPS-213ENST00000489003 SLC43A3Q8NBI5 491 aa17.18■□□□□ 0.34
FDPS-213ENST00000489003 DPF3Q92784 378 aa17.18■□□□□ 0.34
FDPS-213ENST00000489003 GJA10Q969M2 543 aa17.18■□□□□ 0.34
FDPS-213ENST00000489003 NAP1L4Q99733 375 aaKnown RBP17.18■□□□□ 0.34
FDPS-213ENST00000489003 C16orf70Q9BSU1 422 aa17.18■□□□□ 0.34
FDPS-213ENST00000489003 JPH1Q9HDC5 661 aaPredicted RBP17.18■□□□□ 0.34
FDPS-213ENST00000489003 SLC9A2Q9UBY0 812 aa17.18■□□□□ 0.34
FDPS-213ENST00000489003 ATG7O95352 703 aa17.17■□□□□ 0.34
FDPS-213ENST00000489003 CCNE2O96020 404 aa17.17■□□□□ 0.34
FDPS-213ENST00000489003 GCFC2P16383 781 aaKnown RBP17.17■□□□□ 0.34
FDPS-213ENST00000489003 PDCP20941 246 aa17.17■□□□□ 0.34
FDPS-213ENST00000489003 SYT1P21579 422 aa17.17■□□□□ 0.34
FDPS-213ENST00000489003 SPRYD3Q8NCJ5 442 aa17.17■□□□□ 0.34
FDPS-213ENST00000489003 SCN10AQ9Y5Y9 1956 aa17.17■□□□□ 0.34
FDPS-213ENST00000489003 A0A0U1RQG5 324 aaPredicted RBP17.16■□□□□ 0.34
FDPS-213ENST00000489003 LGALS2P05162 132 aa17.16■□□□□ 0.34
FDPS-213ENST00000489003 TCF7P36402 384 aaPredicted RBP17.16■□□□□ 0.34
FDPS-213ENST00000489003 TOB1P50616 345 aaPredicted RBP17.16■□□□□ 0.34
FDPS-213ENST00000489003 RTP1P59025 263 aa17.16■□□□□ 0.34
FDPS-213ENST00000489003 ACTR2P61160 394 aa17.16■□□□□ 0.34
FDPS-213ENST00000489003 ZNF174Q15697 407 aa17.16■□□□□ 0.34
FDPS-213ENST00000489003 NBPF20Q3BBV1 942 aa17.16■□□□□ 0.34
FDPS-213ENST00000489003 UTP14CQ5TAP6 766 aaKnown RBP17.16■□□□□ 0.34
FDPS-213ENST00000489003 ETNPPLQ8TBG4 499 aa17.16■□□□□ 0.34
FDPS-213ENST00000489003 PPP1R13LQ8WUF5 828 aa17.16■□□□□ 0.34
FDPS-213ENST00000489003 HAS1Q92839 578 aa17.16■□□□□ 0.34
FDPS-213ENST00000489003 RIT2Q99578 217 aa17.16■□□□□ 0.34
FDPS-213ENST00000489003 KCNMB3Q9NPA1 279 aa17.16■□□□□ 0.34
FDPS-213ENST00000489003 H3BRB1 525 aa17.15■□□□□ 0.34
FDPS-213ENST00000489003 HAS3O00219 553 aa17.15■□□□□ 0.34
FDPS-213ENST00000489003 PSMD10O75832 226 aa17.15■□□□□ 0.34
FDPS-213ENST00000489003 ZNF286BP0CG31 522 aa17.15■□□□□ 0.34
FDPS-213ENST00000489003 PSEN2P49810 448 aa17.15■□□□□ 0.34
FDPS-213ENST00000489003 TLE2Q04725 743 aa17.15■□□□□ 0.34
FDPS-213ENST00000489003 TRIM60Q495X7 471 aa17.15■□□□□ 0.34
FDPS-213ENST00000489003 ABHD15Q6UXT9 468 aa17.15■□□□□ 0.34
FDPS-213ENST00000489003 POTEDQ86YR6 584 aa17.15■□□□□ 0.34
FDPS-213ENST00000489003 FAM20AQ96MK3 541 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms