RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 TTC19Q6DKK2 380 aaPredicted RBP14.04□□□□□ -0.16
CLIC4-202ENST00000488683 CCDC170Q8IYT3 715 aa14.04□□□□□ -0.16
CLIC4-202ENST00000488683 GUF1Q8N442 669 aaKnown RBP14.04□□□□□ -0.16
CLIC4-202ENST00000488683 CRAMP1Q96RY5 1269 aa14.04□□□□□ -0.16
CLIC4-202ENST00000488683 ZC3H12CQ9C0D7 883 aaKnown RBP14.04□□□□□ -0.16
CLIC4-202ENST00000488683 PLAGL2Q9UPG8 496 aa14.04□□□□□ -0.16
CLIC4-202ENST00000488683 ESYT3A0FGR9 886 aa14.04□□□□□ -0.16
CLIC4-202ENST00000488683 RSPH10B2B2RC85 870 aa14.04□□□□□ -0.16
CLIC4-202ENST00000488683 TLR2O60603 784 aa14.04□□□□□ -0.16
CLIC4-202ENST00000488683 FTCDO95954 541 aa14.04□□□□□ -0.16
CLIC4-202ENST00000488683 RSPH10BP0C881 870 aa14.04□□□□□ -0.16
CLIC4-202ENST00000488683 EEF2P13639 858 aaKnown RBP14.04□□□□□ -0.16
CLIC4-202ENST00000488683 VAV2P52735 878 aa14.04□□□□□ -0.16
CLIC4-202ENST00000488683 IKQ13123 557 aaPredicted RBP14.04□□□□□ -0.16
CLIC4-202ENST00000488683 PDIA5Q14554 519 aa14.04□□□□□ -0.16
CLIC4-202ENST00000488683 HERC4Q5GLZ8 1057 aaPredicted RBP14.04□□□□□ -0.16
CLIC4-202ENST00000488683 BAP1Q92560 729 aa14.04□□□□□ -0.16
CLIC4-202ENST00000488683 QSER1Q2KHR3 1735 aa14.03□□□□□ -0.16
CLIC4-202ENST00000488683 ZBTB39O15060 712 aa14.03□□□□□ -0.16
CLIC4-202ENST00000488683 ERLIN1O75477 346 aa14.03□□□□□ -0.16
CLIC4-202ENST00000488683 PPP1R2P41236 205 aa14.03□□□□□ -0.16
CLIC4-202ENST00000488683 KCNA1Q09470 495 aa14.03□□□□□ -0.16
CLIC4-202ENST00000488683 PABPC4Q13310 644 aaKnown RBP eCLIP14.03□□□□□ -0.168e-11■■■■■ 42.4
CLIC4-202ENST00000488683 SEPT2Q15019 361 aa14.03□□□□□ -0.16
CLIC4-202ENST00000488683 MAN2A1Q16706 1144 aa14.03□□□□□ -0.16
CLIC4-202ENST00000488683 PRR16Q569H4 304 aa14.03□□□□□ -0.16
CLIC4-202ENST00000488683 AEBP2Q6ZN18 517 aaPredicted RBP14.03□□□□□ -0.16
CLIC4-202ENST00000488683 GPBP1Q86WP2 473 aa14.03□□□□□ -0.16
CLIC4-202ENST00000488683 CREG2Q8IUH2 290 aa14.03□□□□□ -0.16
CLIC4-202ENST00000488683 KSR1Q8IVT5 923 aa14.03□□□□□ -0.16
CLIC4-202ENST00000488683 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.03□□□□□ -0.16
CLIC4-202ENST00000488683 LSM14BQ9BX40 385 aaKnown RBP14.03□□□□□ -0.16
CLIC4-202ENST00000488683 PCDHA1Q9Y5I3 950 aa14.03□□□□□ -0.16
CLIC4-202ENST00000488683 KLRG2A4D1S0 409 aaPredicted RBP14.03□□□□□ -0.16
CLIC4-202ENST00000488683 CDK17Q00537 523 aa14.03□□□□□ -0.16
CLIC4-202ENST00000488683 TRADDQ15628 312 aa14.03□□□□□ -0.16
CLIC4-202ENST00000488683 DNAJC21Q5F1R6 531 aaKnown RBP14.03□□□□□ -0.16
CLIC4-202ENST00000488683 PPP4R3AQ6IN85 833 aa14.03□□□□□ -0.16
CLIC4-202ENST00000488683 APOBEC3HQ6NTF7 200 aaKnown RBP14.03□□□□□ -0.16
CLIC4-202ENST00000488683 TRMT1LQ7Z2T5 733 aaKnown RBP14.03□□□□□ -0.16
CLIC4-202ENST00000488683 FAM204AQ9H8W3 233 aa14.03□□□□□ -0.16
CLIC4-202ENST00000488683 SIPA1L1O43166 1804 aa14.02□□□□□ -0.16
CLIC4-202ENST00000488683 NOL4O94818 638 aa14.02□□□□□ -0.16
CLIC4-202ENST00000488683 SYF2O95926 243 aaKnown RBP14.02□□□□□ -0.16
CLIC4-202ENST00000488683 CAPN2P17655 700 aa14.02□□□□□ -0.16
CLIC4-202ENST00000488683 HNRNPH3P31942 346 aaKnown RBP14.02□□□□□ -0.16
CLIC4-202ENST00000488683 MAGEA1P43355 309 aa14.02□□□□□ -0.16
CLIC4-202ENST00000488683 WDR93Q6P2C0 686 aa14.02□□□□□ -0.16
CLIC4-202ENST00000488683 SP8Q8IXZ3 490 aa14.02□□□□□ -0.16
CLIC4-202ENST00000488683 FAM133AQ8N9E0 248 aa14.02□□□□□ -0.16
CLIC4-202ENST00000488683 CUL5Q93034 780 aa14.02□□□□□ -0.16
CLIC4-202ENST00000488683 COA1Q9GZY4 146 aa14.02□□□□□ -0.16
CLIC4-202ENST00000488683 EHD4Q9H223 541 aa14.02□□□□□ -0.16
CLIC4-202ENST00000488683 ZBTB5O15062 677 aa14.02□□□□□ -0.17
CLIC4-202ENST00000488683 KRT18P05783 430 aaKnown RBP14.02□□□□□ -0.17
CLIC4-202ENST00000488683 GGCXP38435 758 aa14.02□□□□□ -0.17
CLIC4-202ENST00000488683 ZSCAN26Q16670 478 aa14.02□□□□□ -0.17
CLIC4-202ENST00000488683 FAM26FQ5R3K3 315 aa14.02□□□□□ -0.17
CLIC4-202ENST00000488683 MYOCDQ8IZQ8 938 aa14.02□□□□□ -0.17
CLIC4-202ENST00000488683 ZNF622Q969S3 477 aaKnown RBP eCLIP14.02□□□□□ -0.17
CLIC4-202ENST00000488683 RAB34Q9BZG1 259 aa14.02□□□□□ -0.17
CLIC4-202ENST00000488683 SH2D4AQ9H788 454 aa14.02□□□□□ -0.17
CLIC4-202ENST00000488683 ATP6V0A2Q9Y487 856 aa14.02□□□□□ -0.17
CLIC4-202ENST00000488683 RNF40O75150 1001 aa14.01□□□□□ -0.17
CLIC4-202ENST00000488683 PLA2G4BP0C869 781 aa14.01□□□□□ -0.17
CLIC4-202ENST00000488683 LRRC63Q05C16 580 aa14.01□□□□□ -0.17
CLIC4-202ENST00000488683 RAPGEF1Q13905 1077 aa14.01□□□□□ -0.17
CLIC4-202ENST00000488683 ZCWPW2Q504Y3 356 aa14.01□□□□□ -0.17
CLIC4-202ENST00000488683 ARSHQ5FYA8 562 aa14.01□□□□□ -0.17
CLIC4-202ENST00000488683 GJB7Q6PEY0 223 aa14.01□□□□□ -0.17
CLIC4-202ENST00000488683 SH3BP5LQ7L8J4 393 aa14.01□□□□□ -0.17
CLIC4-202ENST00000488683 PROM2Q8N271 834 aa14.01□□□□□ -0.17
CLIC4-202ENST00000488683 TBC1D5Q92609 795 aa14.01□□□□□ -0.17
CLIC4-202ENST00000488683 TRIM66O15016 1216 aa14.01□□□□□ -0.17
CLIC4-202ENST00000488683 TUBB4BP68371 445 aa14.01□□□□□ -0.17
CLIC4-202ENST00000488683 HGSNATQ68CP4 663 aa14.01□□□□□ -0.17
CLIC4-202ENST00000488683 EHBP1Q8NDI1 1231 aa14.01□□□□□ -0.17
CLIC4-202ENST00000488683 SCFD1Q8WVM8 642 aa14.01□□□□□ -0.17
CLIC4-202ENST00000488683 SELENOOQ9BVL4 669 aa14.01□□□□□ -0.17
CLIC4-202ENST00000488683 ATF5Q9Y2D1 282 aaPredicted RBP14.01□□□□□ -0.17
CLIC4-202ENST00000488683 NRXN2Q9P2S2 1712 aa14.01□□□□□ -0.17
CLIC4-202ENST00000488683 A0A0U1RQG5 324 aaPredicted RBP14□□□□□ -0.17
CLIC4-202ENST00000488683 CCDC66A2RUB6 948 aa14□□□□□ -0.17
CLIC4-202ENST00000488683 CLIC2O15247 247 aa14□□□□□ -0.17
CLIC4-202ENST00000488683 PRPF6O94906 941 aaKnown RBP14□□□□□ -0.17
CLIC4-202ENST00000488683 SLC9A1P19634 815 aa14□□□□□ -0.17
CLIC4-202ENST00000488683 CDC37Q16543 378 aaPredicted RBP14□□□□□ -0.17
CLIC4-202ENST00000488683 PPP1R18Q6NYC8 613 aa14□□□□□ -0.17
CLIC4-202ENST00000488683 OSBPL9Q96SU4 736 aa14□□□□□ -0.17
CLIC4-202ENST00000488683 ADAMTS1Q9UHI8 967 aa14□□□□□ -0.17
CLIC4-202ENST00000488683 HPCAL4Q9UM19 191 aa14□□□□□ -0.17
CLIC4-202ENST00000488683 SNX12Q9UMY4 172 aa14□□□□□ -0.17
CLIC4-202ENST00000488683 AFF2P51816 1311 aa14□□□□□ -0.17
CLIC4-202ENST00000488683 CHMP2AO43633 222 aa14□□□□□ -0.17
CLIC4-202ENST00000488683 MYBP10242 640 aa14□□□□□ -0.17
CLIC4-202ENST00000488683 RRP1BQ14684 758 aaKnown RBP14□□□□□ -0.17
CLIC4-202ENST00000488683 PDXDC1Q6P996 788 aa14□□□□□ -0.17
CLIC4-202ENST00000488683 SIAH1Q8IUQ4 282 aa14□□□□□ -0.17
CLIC4-202ENST00000488683 RBM12Q9NTZ6 932 aaKnown RBP14□□□□□ -0.17
CLIC4-202ENST00000488683 RGL1Q9NZL6 768 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms