RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 GNA11P29992 359 aa18.23■□□□□ 0.51
CTDSP1-209ENST00000488627 PSEN2P49810 448 aa18.23■□□□□ 0.51
CTDSP1-209ENST00000488627 NEK4P51957 841 aa18.23■□□□□ 0.51
CTDSP1-209ENST00000488627 FPGSQ05932 587 aa18.23■□□□□ 0.51
CTDSP1-209ENST00000488627 MTMR1Q13613 665 aa18.23■□□□□ 0.51
CTDSP1-209ENST00000488627 MFSD10Q14728 455 aa18.23■□□□□ 0.51
CTDSP1-209ENST00000488627 FAM47CQ5HY64 1035 aa18.23■□□□□ 0.51
CTDSP1-209ENST00000488627 TRIM22Q8IYM9 498 aa18.23■□□□□ 0.51
CTDSP1-209ENST00000488627 CDHR1Q96JP9 859 aa18.23■□□□□ 0.51
CTDSP1-209ENST00000488627 AIFM3Q96NN9 605 aa18.23■□□□□ 0.51
CTDSP1-209ENST00000488627 KIF2CQ99661 725 aa18.23■□□□□ 0.51
CTDSP1-209ENST00000488627 KCNH7Q9NS40 1196 aa18.23■□□□□ 0.51
CTDSP1-209ENST00000488627 DEXIO95424 95 aa18.22■□□□□ 0.51
CTDSP1-209ENST00000488627 SLC34A2O95436 690 aa18.22■□□□□ 0.51
CTDSP1-209ENST00000488627 CYP3A4P08684 503 aa18.22■□□□□ 0.51
CTDSP1-209ENST00000488627 CSF2RAP15509 400 aa18.22■□□□□ 0.51
CTDSP1-209ENST00000488627 ARHGAP4P98171 946 aa18.22■□□□□ 0.51
CTDSP1-209ENST00000488627 ME3Q16798 604 aa18.22■□□□□ 0.51
CTDSP1-209ENST00000488627 KIAA0753Q2KHM9 967 aa18.22■□□□□ 0.51
CTDSP1-209ENST00000488627 CEP55Q53EZ4 464 aa18.22■□□□□ 0.51
CTDSP1-209ENST00000488627 GDF6Q6KF10 455 aaPredicted RBP18.22■□□□□ 0.51
CTDSP1-209ENST00000488627 GIMAP8Q8ND71 665 aaPredicted RBP18.22■□□□□ 0.51
CTDSP1-209ENST00000488627 RASGRP4Q8TDF6 673 aa18.22■□□□□ 0.51
CTDSP1-209ENST00000488627 VWCEQ96DN2 955 aa18.22■□□□□ 0.51
CTDSP1-209ENST00000488627 LRCH3Q96II8 777 aa18.22■□□□□ 0.51
CTDSP1-209ENST00000488627 KATNAL1Q9BW62 490 aa18.22■□□□□ 0.51
CTDSP1-209ENST00000488627 WNT8AQ9H1J5 351 aa18.22■□□□□ 0.51
CTDSP1-209ENST00000488627 HDAC6Q9UBN7 1215 aa18.22■□□□□ 0.51
CTDSP1-209ENST00000488627 GTF2IRD1Q9UHL9 959 aa18.22■□□□□ 0.51
CTDSP1-209ENST00000488627 LTBP2Q14767 1821 aa18.21■□□□□ 0.51
CTDSP1-209ENST00000488627 DTNBO60941 627 aa18.21■□□□□ 0.51
CTDSP1-209ENST00000488627 LARGE1O95461 756 aa18.21■□□□□ 0.51
CTDSP1-209ENST00000488627 LGALS2P05162 132 aa18.21■□□□□ 0.51
CTDSP1-209ENST00000488627 ARP10275 920 aa18.21■□□□□ 0.51
CTDSP1-209ENST00000488627 CHMP4BP1P59074 171 aa18.21■□□□□ 0.51
CTDSP1-209ENST00000488627 HIC1Q14526 733 aa18.21■□□□□ 0.51
CTDSP1-209ENST00000488627 NPY5RQ15761 445 aa18.21■□□□□ 0.51
CTDSP1-209ENST00000488627 MCTP2Q6DN12 878 aa18.21■□□□□ 0.51
CTDSP1-209ENST00000488627 CPLX2Q6PUV4 134 aaKnown RBP18.21■□□□□ 0.51
CTDSP1-209ENST00000488627 REXO1Q8N1G1 1221 aaKnown RBP18.21■□□□□ 0.51
CTDSP1-209ENST00000488627 CCDC148Q8NFR7 591 aa18.21■□□□□ 0.51
CTDSP1-209ENST00000488627 ALG1Q9BT22 464 aa18.21■□□□□ 0.51
CTDSP1-209ENST00000488627 IGLV3-22A0A075B6J6 115 aa18.2■□□□□ 0.5
CTDSP1-209ENST00000488627 GSTTP1A0A1W2PQM5 241 aa18.2■□□□□ 0.5
CTDSP1-209ENST00000488627 FAM86B1E9PN63 330 aa18.2■□□□□ 0.5
CTDSP1-209ENST00000488627 H3BRB1 525 aa18.2■□□□□ 0.5
CTDSP1-209ENST00000488627 NOP56O00567 594 aaKnown RBP18.2■□□□□ 0.5
CTDSP1-209ENST00000488627 FAM86B2P0C5J1 330 aa18.2■□□□□ 0.5
CTDSP1-209ENST00000488627 PTGISQ16647 500 aa18.2■□□□□ 0.5
CTDSP1-209ENST00000488627 NIPA1Q7RTP0 329 aa18.2■□□□□ 0.5
CTDSP1-209ENST00000488627 TMEM199Q8N511 208 aa18.2■□□□□ 0.5
CTDSP1-209ENST00000488627 NECAB1Q8N987 351 aa18.2■□□□□ 0.5
CTDSP1-209ENST00000488627 TUT1Q9H6E5 874 aaKnown RBP18.2■□□□□ 0.5
CTDSP1-209ENST00000488627 PKD2L1Q9P0L9 805 aa18.2■□□□□ 0.5
CTDSP1-209ENST00000488627 M0R2N6 131 aa18.19■□□□□ 0.5
CTDSP1-209ENST00000488627 HOXC8P31273 242 aa18.19■□□□□ 0.5
CTDSP1-209ENST00000488627 CCL23P55773 120 aa18.19■□□□□ 0.5
CTDSP1-209ENST00000488627 NLRP5P59047 1200 aa18.19■□□□□ 0.5
CTDSP1-209ENST00000488627 SP4Q02446 784 aa18.19■□□□□ 0.5
CTDSP1-209ENST00000488627 ITGB3BPQ13352 177 aaPredicted RBP18.19■□□□□ 0.5
CTDSP1-209ENST00000488627 PPIGQ13427 754 aaKnown RBP eCLIP18.19■□□□□ 0.55e-8■■■□□ 16.4
CTDSP1-209ENST00000488627 TMEM240Q5SV17 173 aa18.19■□□□□ 0.5
CTDSP1-209ENST00000488627 TRIM50Q86XT4 487 aa18.19■□□□□ 0.5
CTDSP1-209ENST00000488627 FAM177A1Q8N128 213 aaPredicted RBP18.19■□□□□ 0.5
CTDSP1-209ENST00000488627 C7orf31Q8N865 590 aa18.19■□□□□ 0.5
CTDSP1-209ENST00000488627 BICD2Q8TD16 824 aa18.19■□□□□ 0.5
CTDSP1-209ENST00000488627 DHX38Q92620 1227 aaKnown RBP18.19■□□□□ 0.5
CTDSP1-209ENST00000488627 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.19■□□□□ 0.55e-11■■□□□ 13.8
CTDSP1-209ENST00000488627 AGO4Q9HCK5 861 aaKnown RBP18.19■□□□□ 0.5
CTDSP1-209ENST00000488627 PCDHA4Q9UN74 947 aa18.19■□□□□ 0.5
CTDSP1-209ENST00000488627 SZT2Q5T011 3432 aa18.19■□□□□ 0.5
CTDSP1-209ENST00000488627 CDKL5O76039 1030 aa18.18■□□□□ 0.5
CTDSP1-209ENST00000488627 ACRP10323 421 aa18.18■□□□□ 0.5
CTDSP1-209ENST00000488627 FDPSP14324 419 aaKnown RBP18.18■□□□□ 0.5
CTDSP1-209ENST00000488627 CIITAP33076 1130 aa18.18■□□□□ 0.5
CTDSP1-209ENST00000488627 ZNF200P98182 395 aaPredicted RBP18.18■□□□□ 0.5
CTDSP1-209ENST00000488627 ST3GAL1Q11201 340 aa18.18■□□□□ 0.5
CTDSP1-209ENST00000488627 DAGLBQ8NCG7 672 aa18.18■□□□□ 0.5
CTDSP1-209ENST00000488627 SEPT1Q8WYJ6 367 aa18.18■□□□□ 0.5
CTDSP1-209ENST00000488627 GTF3C6Q969F1 213 aa18.18■□□□□ 0.5
CTDSP1-209ENST00000488627 IL23AQ9NPF7 189 aa18.18■□□□□ 0.5
CTDSP1-209ENST00000488627 STK36Q9NRP7 1315 aa18.18■□□□□ 0.5
CTDSP1-209ENST00000488627 PITPNM1O00562 1244 aa18.17■□□□□ 0.5
CTDSP1-209ENST00000488627 DHX15O43143 795 aaKnown RBP18.17■□□□□ 0.5
CTDSP1-209ENST00000488627 TCF7P36402 384 aaPredicted RBP18.17■□□□□ 0.5
CTDSP1-209ENST00000488627 ZNF76P36508 570 aa18.17■□□□□ 0.5
CTDSP1-209ENST00000488627 RBM25P49756 843 aaKnown RBP18.17■□□□□ 0.5
CTDSP1-209ENST00000488627 UTP14CQ5TAP6 766 aaKnown RBP18.17■□□□□ 0.5
CTDSP1-209ENST00000488627 RASIP1Q5U651 963 aa18.17■□□□□ 0.5
CTDSP1-209ENST00000488627 PLA2G4DQ86XP0 818 aa18.17■□□□□ 0.5
CTDSP1-209ENST00000488627 SCLYQ96I15 445 aa18.17■□□□□ 0.5
CTDSP1-209ENST00000488627 PCYT2Q99447 389 aa18.17■□□□□ 0.5
CTDSP1-209ENST00000488627 C22orf23Q9BZE7 217 aa18.17■□□□□ 0.5
CTDSP1-209ENST00000488627 JPH1Q9HDC5 661 aaPredicted RBP18.17■□□□□ 0.5
CTDSP1-209ENST00000488627 NFASCO94856 1347 aa18.17■□□□□ 0.5
CTDSP1-209ENST00000488627 IQCF3P0C7M6 154 aa18.16■□□□□ 0.5
CTDSP1-209ENST00000488627 SMIM10L2AP0DMW4 78 aa18.16■□□□□ 0.5
CTDSP1-209ENST00000488627 SMIM10L2BP0DMW5 78 aa18.16■□□□□ 0.5
CTDSP1-209ENST00000488627 RBL2Q08999 1139 aa18.16■□□□□ 0.5
CTDSP1-209ENST00000488627 GPNMBQ14956 572 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms