RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 RAVER2Q9HCJ3 691 aaKnown RBP14.29□□□□□ -0.12
NELFE-209ENST00000488426 PCDHA12Q9UN75 941 aa14.29□□□□□ -0.12
NELFE-209ENST00000488426 GOLGA6L19H0YKK7 550 aa14.29□□□□□ -0.12
NELFE-209ENST00000488426 ATP2A1O14983 1001 aa14.29□□□□□ -0.12
NELFE-209ENST00000488426 GTPBP6O43824 516 aaPredicted RBP14.29□□□□□ -0.12
NELFE-209ENST00000488426 ALAS1P13196 640 aa14.29□□□□□ -0.12
NELFE-209ENST00000488426 AFMP43652 599 aa14.29□□□□□ -0.12
NELFE-209ENST00000488426 DPYDQ12882 1025 aa14.29□□□□□ -0.12
NELFE-209ENST00000488426 GRAMD1CQ8IYS0 662 aa14.29□□□□□ -0.12
NELFE-209ENST00000488426 REPS2Q8NFH8 660 aa14.29□□□□□ -0.12
NELFE-209ENST00000488426 ETNPPLQ8TBG4 499 aa14.29□□□□□ -0.12
NELFE-209ENST00000488426 TBC1D5Q92609 795 aa14.29□□□□□ -0.12
NELFE-209ENST00000488426 USP6NLQ92738 828 aa14.29□□□□□ -0.12
NELFE-209ENST00000488426 CALML4Q96GE6 196 aa14.29□□□□□ -0.12
NELFE-209ENST00000488426 FAM20AQ96MK3 541 aa14.29□□□□□ -0.12
NELFE-209ENST00000488426 MAF1Q9H063 256 aa14.29□□□□□ -0.12
NELFE-209ENST00000488426 MAN1B1Q9UKM7 699 aa14.29□□□□□ -0.12
NELFE-209ENST00000488426 DNAH12Q6ZR08 3092 aa14.29□□□□□ -0.12
NELFE-209ENST00000488426 A0A087WWV3 80 aa14.28□□□□□ -0.12
NELFE-209ENST00000488426 GJB1P08034 283 aa14.28□□□□□ -0.12
NELFE-209ENST00000488426 MORC3Q14149 939 aa14.28□□□□□ -0.12
NELFE-209ENST00000488426 NAALADL2Q58DX5 795 aa14.28□□□□□ -0.12
NELFE-209ENST00000488426 MORN1Q5T089 497 aa14.28□□□□□ -0.12
NELFE-209ENST00000488426 LBX2Q6XYB7 198 aa14.28□□□□□ -0.12
NELFE-209ENST00000488426 LENG9Q96B70 501 aa14.28□□□□□ -0.12
NELFE-209ENST00000488426 MMTAG2Q9BU76 263 aaKnown RBP14.28□□□□□ -0.12
NELFE-209ENST00000488426 HOXC10Q9NYD6 342 aa14.28□□□□□ -0.12
NELFE-209ENST00000488426 DACH1Q9UI36 760 aa14.28□□□□□ -0.12
NELFE-209ENST00000488426 A0A0G2JMZ2 1700 aa14.28□□□□□ -0.12
NELFE-209ENST00000488426 BECN2A8MW95 431 aa14.27□□□□□ -0.12
NELFE-209ENST00000488426 FAM86B1E9PN63 330 aa14.27□□□□□ -0.12
NELFE-209ENST00000488426 NFIBO00712 420 aa14.27□□□□□ -0.12
NELFE-209ENST00000488426 FAM86B2P0C5J1 330 aa14.27□□□□□ -0.12
NELFE-209ENST00000488426 PLCG1P19174 1290 aa14.27□□□□□ -0.12
NELFE-209ENST00000488426 ZNF76P36508 570 aa14.27□□□□□ -0.12
NELFE-209ENST00000488426 GJA8P48165 433 aa14.27□□□□□ -0.12
NELFE-209ENST00000488426 UBXN2AP68543 259 aa14.27□□□□□ -0.12
NELFE-209ENST00000488426 SEMA3FQ13275 785 aa14.27□□□□□ -0.12
NELFE-209ENST00000488426 PRR16Q569H4 304 aa14.27□□□□□ -0.12
NELFE-209ENST00000488426 KRT79Q5XKE5 535 aa14.27□□□□□ -0.12
NELFE-209ENST00000488426 DHX40Q8IX18 779 aaKnown RBP14.27□□□□□ -0.12
NELFE-209ENST00000488426 MLKLQ8NB16 471 aa14.27□□□□□ -0.12
NELFE-209ENST00000488426 U2AF1L4Q8WU68 220 aaKnown RBP14.27□□□□□ -0.12
NELFE-209ENST00000488426 DEFB118Q96PH6 123 aa14.27□□□□□ -0.12
NELFE-209ENST00000488426 STK17AQ9UEE5 414 aa14.27□□□□□ -0.12
NELFE-209ENST00000488426 STK24Q9Y6E0 443 aa14.27□□□□□ -0.12
NELFE-209ENST00000488426 RPTORQ8N122 1335 aa14.27□□□□□ -0.12
NELFE-209ENST00000488426 TKFCQ3LXA3 575 aa14.27□□□□□ -0.13
NELFE-209ENST00000488426 GLIPR1L2Q4G1C9 344 aa14.27□□□□□ -0.13
NELFE-209ENST00000488426 CT47A1Q5JQC4 288 aaPredicted RBP14.27□□□□□ -0.13
NELFE-209ENST00000488426 PLEKHH3Q7Z736 793 aa14.27□□□□□ -0.13
NELFE-209ENST00000488426 TRERF1Q96PN7 1200 aa14.27□□□□□ -0.13
NELFE-209ENST00000488426 MOV10L1Q9BXT6 1211 aaKnown RBP14.27□□□□□ -0.13
NELFE-209ENST00000488426 KBTBD4Q9NVX7 518 aa14.27□□□□□ -0.13
NELFE-209ENST00000488426 FLRT1Q9NZU1 646 aa14.27□□□□□ -0.13
NELFE-209ENST00000488426 FRMPD4Q14CM0 1322 aa14.26□□□□□ -0.13
NELFE-209ENST00000488426 KDM3AQ9Y4C1 1321 aa14.26□□□□□ -0.13
NELFE-209ENST00000488426 IGLV3-22A0A075B6J6 115 aa14.26□□□□□ -0.13
NELFE-209ENST00000488426 POTEMA6NI47 508 aa14.26□□□□□ -0.13
NELFE-209ENST00000488426 SMTNL1A8MU46 457 aa14.26□□□□□ -0.13
NELFE-209ENST00000488426 IKBKBO14920 756 aa14.26□□□□□ -0.13
NELFE-209ENST00000488426 SGPL1O95470 568 aa14.26□□□□□ -0.13
NELFE-209ENST00000488426 MAPK4P31152 587 aa14.26□□□□□ -0.13
NELFE-209ENST00000488426 MUM1L1Q5H9M0 696 aa14.26□□□□□ -0.13
NELFE-209ENST00000488426 HYIQ5T013 277 aa14.26□□□□□ -0.13
NELFE-209ENST00000488426 WDR78Q5VTH9 848 aa14.26□□□□□ -0.13
NELFE-209ENST00000488426 AOPEPQ8N6M6 819 aa14.26□□□□□ -0.13
NELFE-209ENST00000488426 SNX29Q8TEQ0 813 aa14.26□□□□□ -0.13
NELFE-209ENST00000488426 CDK5RAP3Q96JB5 506 aa14.26□□□□□ -0.13
NELFE-209ENST00000488426 MTRQ99707 1265 aa14.26□□□□□ -0.13
NELFE-209ENST00000488426 NUDT12Q9BQG2 462 aa14.26□□□□□ -0.13
NELFE-209ENST00000488426 PAK6Q9NQU5 681 aaPredicted RBP14.26□□□□□ -0.13
NELFE-209ENST00000488426 RMND1Q9NWS8 449 aa14.26□□□□□ -0.13
NELFE-209ENST00000488426 ZNF214Q9UL59 606 aaPredicted RBP14.26□□□□□ -0.13
NELFE-209ENST00000488426 BMP6P22004 513 aa14.25□□□□□ -0.13
NELFE-209ENST00000488426 SETQ01105 290 aaPredicted RBP14.25□□□□□ -0.13
NELFE-209ENST00000488426 GRB10Q13322 594 aa14.25□□□□□ -0.13
NELFE-209ENST00000488426 ISM2Q6H9L7 571 aa14.25□□□□□ -0.13
NELFE-209ENST00000488426 UBE2Q1Q7Z7E8 422 aa14.25□□□□□ -0.13
NELFE-209ENST00000488426 TEX13BQ9BXU2 312 aa14.25□□□□□ -0.13
NELFE-209ENST00000488426 RNF146Q9NTX7 359 aa14.25□□□□□ -0.13
NELFE-209ENST00000488426 MSH4O15457 936 aa14.25□□□□□ -0.13
NELFE-209ENST00000488426 ADCY5O95622 1261 aa14.25□□□□□ -0.13
NELFE-209ENST00000488426 TPM4P67936 248 aa14.25□□□□□ -0.13
NELFE-209ENST00000488426 AMPD3Q01432 767 aa14.25□□□□□ -0.13
NELFE-209ENST00000488426 TMEM132BQ14DG7 1078 aa14.25□□□□□ -0.13
NELFE-209ENST00000488426 TMEM119Q4V9L6 283 aa14.25□□□□□ -0.13
NELFE-209ENST00000488426 CEP55Q53EZ4 464 aa14.25□□□□□ -0.13
NELFE-209ENST00000488426 SNRNP48Q6IEG0 339 aaKnown RBP14.25□□□□□ -0.13
NELFE-209ENST00000488426 SARM1Q6SZW1 724 aa14.25□□□□□ -0.13
NELFE-209ENST00000488426 NIPA1Q7RTP0 329 aa14.25□□□□□ -0.13
NELFE-209ENST00000488426 MB21D1Q8N884 522 aa14.25□□□□□ -0.13
NELFE-209ENST00000488426 NPLOC4Q8TAT6 608 aa14.25□□□□□ -0.13
NELFE-209ENST00000488426 SYTL5Q8TDW5 730 aaPredicted RBP14.25□□□□□ -0.13
NELFE-209ENST00000488426 NT5C3AQ9H0P0 336 aa14.25□□□□□ -0.13
NELFE-209ENST00000488426 HOMER2Q9NSB8 354 aa14.25□□□□□ -0.13
NELFE-209ENST00000488426 COL20A1Q9P218 1284 aa14.25□□□□□ -0.13
NELFE-209ENST00000488426 HMGCRP04035 888 aa14.24□□□□□ -0.13
NELFE-209ENST00000488426 CACNB2Q08289 660 aaPredicted RBP14.24□□□□□ -0.13
NELFE-209ENST00000488426 SPIRE1Q08AE8 756 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms