RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 SPP2Q13103 211 aa7.16□□□□□ -1.26
CDHR3-213ENST00000488386 PKN2Q16513 984 aaKnown RBP7.16□□□□□ -1.26
CDHR3-213ENST00000488386 FOXD4L6Q3SYB3 417 aaPredicted RBP7.16□□□□□ -1.26
CDHR3-213ENST00000488386 C17orf99Q6UX52 265 aa7.16□□□□□ -1.26
CDHR3-213ENST00000488386 FOXD4L3Q6VB84 417 aaPredicted RBP7.16□□□□□ -1.26
CDHR3-213ENST00000488386 PRRT2Q7Z6L0 340 aaPredicted RBP7.16□□□□□ -1.26
CDHR3-213ENST00000488386 ANKRD23Q86SG2 305 aa7.16□□□□□ -1.26
CDHR3-213ENST00000488386 ALYREFQ86V81 257 aaKnown RBP7.16□□□□□ -1.26
CDHR3-213ENST00000488386 CD163Q86VB7 1156 aa7.16□□□□□ -1.26
CDHR3-213ENST00000488386 ERC1Q8IUD2 1116 aa7.16□□□□□ -1.26
CDHR3-213ENST00000488386 CACTIN-AS1Q8N1I8 211 aa7.16□□□□□ -1.26
CDHR3-213ENST00000488386 CLASRPQ8N2M8 674 aaKnown RBP7.16□□□□□ -1.26
CDHR3-213ENST00000488386 KIF1BPQ96EK5 621 aa7.16□□□□□ -1.26
CDHR3-213ENST00000488386 ZNF512BQ96KM6 892 aaPredicted RBP7.16□□□□□ -1.26
CDHR3-213ENST00000488386 KCNK4Q9NYG8 393 aa7.16□□□□□ -1.26
CDHR3-213ENST00000488386 ADGRA2Q96PE1 1338 aa7.16□□□□□ -1.26
CDHR3-213ENST00000488386 BRCA2P51587 3418 aa7.15□□□□□ -1.26
CDHR3-213ENST00000488386 C1QTNF9BB2RNN3 333 aa7.15□□□□□ -1.26
CDHR3-213ENST00000488386 FSCN2O14926 492 aa7.15□□□□□ -1.26
CDHR3-213ENST00000488386 PRKAB2O43741 272 aa7.15□□□□□ -1.26
CDHR3-213ENST00000488386 ADAM11O75078 769 aa7.15□□□□□ -1.26
CDHR3-213ENST00000488386 HMMRO75330 724 aa7.15□□□□□ -1.26
CDHR3-213ENST00000488386 MAP4K4O95819 1239 aaPredicted RBP7.15□□□□□ -1.26
CDHR3-213ENST00000488386 CYP2D6P10635 497 aa7.15□□□□□ -1.26
CDHR3-213ENST00000488386 PDE6AP16499 860 aa7.15□□□□□ -1.26
CDHR3-213ENST00000488386 CAP2P40123 477 aa7.15□□□□□ -1.26
CDHR3-213ENST00000488386 PSMC4P43686 418 aa7.15□□□□□ -1.26
CDHR3-213ENST00000488386 HMGCS2P54868 508 aa7.15□□□□□ -1.26
CDHR3-213ENST00000488386 ZYXQ15942 572 aaKnown RBP7.15□□□□□ -1.26
CDHR3-213ENST00000488386 HSP90AB4PQ58FF6 505 aa7.15□□□□□ -1.26
CDHR3-213ENST00000488386 NXPE4Q6UWF7 544 aa7.15□□□□□ -1.26
CDHR3-213ENST00000488386 LCORLQ8N3X6 602 aa7.15□□□□□ -1.26
CDHR3-213ENST00000488386 CRACR2BQ8N4Y2 399 aaPredicted RBP7.15□□□□□ -1.26
CDHR3-213ENST00000488386 SDR42E1Q8WUS8 393 aa7.15□□□□□ -1.26
CDHR3-213ENST00000488386 RIOK1Q9BRS2 568 aaKnown RBP7.15□□□□□ -1.26
CDHR3-213ENST00000488386 BCO2Q9BYV7 579 aa7.15□□□□□ -1.26
CDHR3-213ENST00000488386 GABRQQ9UN88 632 aa7.15□□□□□ -1.26
CDHR3-213ENST00000488386 ZNF532Q9HCE3 1301 aa7.15□□□□□ -1.26
CDHR3-213ENST00000488386 DDX60LQ5H9U9 1706 aaKnown RBP7.15□□□□□ -1.27
CDHR3-213ENST00000488386 LOC285556D6RIA3 1793 aa7.15□□□□□ -1.27
CDHR3-213ENST00000488386 BAZ2AQ9UIF9 1905 aaKnown RBP7.15□□□□□ -1.27
CDHR3-213ENST00000488386 SOX1O00570 391 aaPredicted RBP7.14□□□□□ -1.27
CDHR3-213ENST00000488386 CXCL11O14625 94 aa7.14□□□□□ -1.27
CDHR3-213ENST00000488386 DDX3YO15523 660 aaKnown RBP7.14□□□□□ -1.27
CDHR3-213ENST00000488386 WISP1O95388 367 aa7.14□□□□□ -1.27
CDHR3-213ENST00000488386 COL2A1P02458 1487 aaPredicted RBP7.14□□□□□ -1.27
CDHR3-213ENST00000488386 MYH7P12883 1935 aa7.14□□□□□ -1.27
CDHR3-213ENST00000488386 EN2P19622 333 aaPredicted RBP7.14□□□□□ -1.27
CDHR3-213ENST00000488386 ITPKAP23677 461 aa7.14□□□□□ -1.27
CDHR3-213ENST00000488386 PLCD1P51178 756 aa7.14□□□□□ -1.27
CDHR3-213ENST00000488386 MFAP1P55081 439 aaKnown RBP7.14□□□□□ -1.27
CDHR3-213ENST00000488386 MAP3K12Q12852 859 aa7.14□□□□□ -1.27
CDHR3-213ENST00000488386 PDE3AQ14432 1141 aa7.14□□□□□ -1.27
CDHR3-213ENST00000488386 COL19A1Q14993 1142 aa7.14□□□□□ -1.27
CDHR3-213ENST00000488386 SLC9C2Q5TAH2 1124 aa7.14□□□□□ -1.27
CDHR3-213ENST00000488386 ALG1LQ6GMV1 187 aa7.14□□□□□ -1.27
CDHR3-213ENST00000488386 ANKRD13CQ8N6S4 541 aa7.14□□□□□ -1.27
CDHR3-213ENST00000488386 OTUD7AQ8TE49 926 aaPredicted RBP7.14□□□□□ -1.27
CDHR3-213ENST00000488386 FBF1Q8TES7 1133 aa7.14□□□□□ -1.27
CDHR3-213ENST00000488386 SLC7A3Q8WY07 619 aa7.14□□□□□ -1.27
CDHR3-213ENST00000488386 KLHDC7BQ96G42 594 aa7.14□□□□□ -1.27
CDHR3-213ENST00000488386 CRBNQ96SW2 442 aa7.14□□□□□ -1.27
CDHR3-213ENST00000488386 PARK7Q99497 189 aaKnown RBP7.14□□□□□ -1.27
CDHR3-213ENST00000488386 OSBPL7Q9BZF2 842 aa7.14□□□□□ -1.27
CDHR3-213ENST00000488386 ZNF576Q9H609 170 aa7.14□□□□□ -1.27
CDHR3-213ENST00000488386 ARMT1Q9H993 441 aa7.14□□□□□ -1.27
CDHR3-213ENST00000488386 PAG1Q9NWQ8 432 aa7.14□□□□□ -1.27
CDHR3-213ENST00000488386 PI4KBQ9UBF8 816 aa7.14□□□□□ -1.27
CDHR3-213ENST00000488386 DOCK3Q8IZD9 2030 aa7.13□□□□□ -1.27
CDHR3-213ENST00000488386 TNRC18O15417 2968 aaPredicted RBP7.13□□□□□ -1.27
CDHR3-213ENST00000488386 MYPNQ86TC9 1320 aa7.13□□□□□ -1.27
CDHR3-213ENST00000488386 CYP2D7A0A087X1C5 515 aa7.13□□□□□ -1.27
CDHR3-213ENST00000488386 TMEM238LA0A1B0GVL6 79 aa7.13□□□□□ -1.27
CDHR3-213ENST00000488386 TCRBV5S4A2TA0A5A2 114 aa7.13□□□□□ -1.27
CDHR3-213ENST00000488386 RAB11FIP3O75154 756 aa7.13□□□□□ -1.27
CDHR3-213ENST00000488386 MBD4O95243 580 aa7.13□□□□□ -1.27
CDHR3-213ENST00000488386 GH2P01242 217 aa7.13□□□□□ -1.27
CDHR3-213ENST00000488386 HLA-DOAP06340 250 aa7.13□□□□□ -1.27
CDHR3-213ENST00000488386 ESRRAP11474 423 aaPredicted RBP7.13□□□□□ -1.27
CDHR3-213ENST00000488386 RRP1P56182 461 aaKnown RBP7.13□□□□□ -1.27
CDHR3-213ENST00000488386 ATP2B2Q01814 1243 aa7.13□□□□□ -1.27
CDHR3-213ENST00000488386 PRKCZQ05513 592 aa7.13□□□□□ -1.27
CDHR3-213ENST00000488386 KIF22Q14807 665 aa7.13□□□□□ -1.27
CDHR3-213ENST00000488386 ZNF423Q2M1K9 1284 aa7.13□□□□□ -1.27
CDHR3-213ENST00000488386 SLC9C1Q4G0N8 1177 aa7.13□□□□□ -1.27
CDHR3-213ENST00000488386 FASTKD5Q7L8L6 764 aaKnown RBP7.13□□□□□ -1.27
CDHR3-213ENST00000488386 CLEC10AQ8IUN9 316 aa7.13□□□□□ -1.27
CDHR3-213ENST00000488386 STK11IPQ8N1F8 1099 aa7.13□□□□□ -1.27
CDHR3-213ENST00000488386 SLC44A5Q8NCS7 719 aa7.13□□□□□ -1.27
CDHR3-213ENST00000488386 SMCR8Q8TEV9 937 aaPredicted RBP7.13□□□□□ -1.27
CDHR3-213ENST00000488386 FOXD4L4Q8WXT5 416 aaPredicted RBP7.13□□□□□ -1.27
CDHR3-213ENST00000488386 DYNLL2Q96FJ2 89 aa7.13□□□□□ -1.27
CDHR3-213ENST00000488386 LRRCC1Q9C099 1032 aa7.13□□□□□ -1.27
CDHR3-213ENST00000488386 DHX36Q9H2U1 1008 aaKnown RBP7.13□□□□□ -1.27
CDHR3-213ENST00000488386 ZCCHC17Q9NP64 241 aaKnown RBP7.13□□□□□ -1.27
CDHR3-213ENST00000488386 HERC5Q9UII4 1024 aaKnown RBP7.13□□□□□ -1.27
CDHR3-213ENST00000488386 ZBTB21Q9ULJ3 1066 aa7.13□□□□□ -1.27
CDHR3-213ENST00000488386 AGTPBP1Q9UPW5 1226 aa7.13□□□□□ -1.27
CDHR3-213ENST00000488386 MYH8P13535 1937 aa7.12□□□□□ -1.27
CDHR3-213ENST00000488386 PRPF40AO75400 957 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms