RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 TMCO2Q7Z6W1 182 aaPredicted RBP13□□□□□ -0.33
NIPAL3-207ENST00000488155 SGMS1Q86VZ5 419 aa13□□□□□ -0.33
NIPAL3-207ENST00000488155 TRIM50Q86XT4 487 aa13□□□□□ -0.33
NIPAL3-207ENST00000488155 AFAP1L1Q8TED9 768 aa13□□□□□ -0.33
NIPAL3-207ENST00000488155 INPP4AQ96PE3 977 aaPredicted RBP13□□□□□ -0.33
NIPAL3-207ENST00000488155 CERS4Q9HA82 394 aa13□□□□□ -0.33
NIPAL3-207ENST00000488155 CHD7Q9P2D1 2997 aa13□□□□□ -0.33
NIPAL3-207ENST00000488155 SIP14410 1827 aa12.99□□□□□ -0.33
NIPAL3-207ENST00000488155 CNTNAP5Q8WYK1 1306 aa12.99□□□□□ -0.33
NIPAL3-207ENST00000488155 KLF18A0A0U1RQI7 1052 aa12.99□□□□□ -0.33
NIPAL3-207ENST00000488155 SPATA31C2B4DYI2 1134 aa12.99□□□□□ -0.33
NIPAL3-207ENST00000488155 H3BRB1 525 aa12.99□□□□□ -0.33
NIPAL3-207ENST00000488155 PIK3CDO00329 1044 aa12.99□□□□□ -0.33
NIPAL3-207ENST00000488155 ZBTB43O43298 467 aa12.99□□□□□ -0.33
NIPAL3-207ENST00000488155 FIBPO43427 364 aa12.99□□□□□ -0.33
NIPAL3-207ENST00000488155 HOXD8P13378 290 aaPredicted RBP12.99□□□□□ -0.33
NIPAL3-207ENST00000488155 ICAM3P32942 547 aa12.99□□□□□ -0.33
NIPAL3-207ENST00000488155 FGD1P98174 961 aa12.99□□□□□ -0.33
NIPAL3-207ENST00000488155 EXOSC10Q01780 885 aaKnown RBP12.99□□□□□ -0.33
NIPAL3-207ENST00000488155 ADGRE1Q14246 886 aa12.99□□□□□ -0.33
NIPAL3-207ENST00000488155 NEDD9Q14511 834 aa12.99□□□□□ -0.33
NIPAL3-207ENST00000488155 RTN1Q16799 776 aa12.99□□□□□ -0.33
NIPAL3-207ENST00000488155 ZNF618Q5T7W0 954 aa12.99□□□□□ -0.33
NIPAL3-207ENST00000488155 PCNX4Q63HM2 1172 aa12.99□□□□□ -0.33
NIPAL3-207ENST00000488155 METTL7BQ6UX53 244 aa12.99□□□□□ -0.33
NIPAL3-207ENST00000488155 NLRX1Q86UT6 975 aa12.99□□□□□ -0.33
NIPAL3-207ENST00000488155 PGBD1Q96JS3 809 aa12.99□□□□□ -0.33
NIPAL3-207ENST00000488155 TUT1Q9H6E5 874 aaKnown RBP12.99□□□□□ -0.33
NIPAL3-207ENST00000488155 PRDM6Q9NQX0 595 aa12.99□□□□□ -0.33
NIPAL3-207ENST00000488155 PCDHA11Q9Y5I1 949 aa12.99□□□□□ -0.33
NIPAL3-207ENST00000488155 CHD9Q3L8U1 2897 aa12.99□□□□□ -0.33
NIPAL3-207ENST00000488155 NLRC5Q86WI3 1866 aa12.99□□□□□ -0.33
NIPAL3-207ENST00000488155 NCOR1O75376 2440 aa12.98□□□□□ -0.33
NIPAL3-207ENST00000488155 SPDYE3A6NKU9 549 aa12.98□□□□□ -0.33
NIPAL3-207ENST00000488155 GOLGA8AA7E2F4 631 aa12.98□□□□□ -0.33
NIPAL3-207ENST00000488155 GOLGA8BA8MQT2 603 aa12.98□□□□□ -0.33
NIPAL3-207ENST00000488155 RFXAPO00287 272 aa12.98□□□□□ -0.33
NIPAL3-207ENST00000488155 TREHO43280 583 aa12.98□□□□□ -0.33
NIPAL3-207ENST00000488155 NBNO60934 754 aa12.98□□□□□ -0.33
NIPAL3-207ENST00000488155 ATP9AO75110 1047 aa12.98□□□□□ -0.33
NIPAL3-207ENST00000488155 STAM2O75886 525 aa12.98□□□□□ -0.33
NIPAL3-207ENST00000488155 CA3P07451 260 aa12.98□□□□□ -0.33
NIPAL3-207ENST00000488155 SMIM10L2AP0DMW4 78 aa12.98□□□□□ -0.33
NIPAL3-207ENST00000488155 SMIM10L2BP0DMW5 78 aa12.98□□□□□ -0.33
NIPAL3-207ENST00000488155 THPOP40225 353 aa12.98□□□□□ -0.33
NIPAL3-207ENST00000488155 KCNJ6P48051 423 aa12.98□□□□□ -0.33
NIPAL3-207ENST00000488155 PTK7Q13308 1070 aa12.98□□□□□ -0.33
NIPAL3-207ENST00000488155 TCTN1Q2MV58 587 aa12.98□□□□□ -0.33
NIPAL3-207ENST00000488155 WWC2Q6AWC2 1192 aa12.98□□□□□ -0.33
NIPAL3-207ENST00000488155 ATP6V0A1Q93050 837 aa12.98□□□□□ -0.33
NIPAL3-207ENST00000488155 GPR20Q99678 358 aa12.98□□□□□ -0.33
NIPAL3-207ENST00000488155 COL25A1Q9BXS0 654 aaPredicted RBP12.98□□□□□ -0.33
NIPAL3-207ENST00000488155 RNPEPQ9H4A4 650 aa12.98□□□□□ -0.33
NIPAL3-207ENST00000488155 PCDHA6Q9UN73 950 aa12.98□□□□□ -0.33
NIPAL3-207ENST00000488155 PCDHA8Q9Y5H6 950 aa12.98□□□□□ -0.33
NIPAL3-207ENST00000488155 V9GY48 417 aaPredicted RBP12.98□□□□□ -0.33
NIPAL3-207ENST00000488155 C17orf102A2RUQ5 167 aa12.97□□□□□ -0.33
NIPAL3-207ENST00000488155 ARHGEF15O94989 841 aa12.97□□□□□ -0.33
NIPAL3-207ENST00000488155 CTSHP09668 335 aa12.97□□□□□ -0.33
NIPAL3-207ENST00000488155 CDC27P30260 824 aa12.97□□□□□ -0.33
NIPAL3-207ENST00000488155 NAPAP54920 295 aa12.97□□□□□ -0.33
NIPAL3-207ENST00000488155 APOBRQ0VD83 1088 aa12.97□□□□□ -0.33
NIPAL3-207ENST00000488155 KRT32Q14532 448 aa12.97□□□□□ -0.33
NIPAL3-207ENST00000488155 TRIM71Q2Q1W2 868 aaKnown RBP12.97□□□□□ -0.33
NIPAL3-207ENST00000488155 TSGA10IPQ3SY00 556 aa12.97□□□□□ -0.33
NIPAL3-207ENST00000488155 TYW1BQ6NUM6 668 aa12.97□□□□□ -0.33
NIPAL3-207ENST00000488155 FAM117BQ6P1L5 589 aa12.97□□□□□ -0.33
NIPAL3-207ENST00000488155 HERC6Q8IVU3 1022 aa12.97□□□□□ -0.33
NIPAL3-207ENST00000488155 MICALL1Q8N3F8 863 aa12.97□□□□□ -0.33
NIPAL3-207ENST00000488155 JAKMIP1Q96N16 626 aaKnown RBP12.97□□□□□ -0.33
NIPAL3-207ENST00000488155 SLC9A7Q96T83 725 aa12.97□□□□□ -0.33
NIPAL3-207ENST00000488155 SETD4Q9NVD3 440 aa12.97□□□□□ -0.33
NIPAL3-207ENST00000488155 RBM28Q9NW13 759 aaKnown RBP12.97□□□□□ -0.33
NIPAL3-207ENST00000488155 ITGB5P18084 799 aa12.96□□□□□ -0.33
NIPAL3-207ENST00000488155 ADD1P35611 737 aaKnown RBP12.96□□□□□ -0.33
NIPAL3-207ENST00000488155 WDR5P61964 334 aaKnown RBP12.96□□□□□ -0.33
NIPAL3-207ENST00000488155 DEFB103AP81534 67 aa12.96□□□□□ -0.33
NIPAL3-207ENST00000488155 MBTPS1Q14703 1052 aa12.96□□□□□ -0.33
NIPAL3-207ENST00000488155 XRRA1Q6P2D8 792 aa12.96□□□□□ -0.33
NIPAL3-207ENST00000488155 CNKSR3Q6P9H4 555 aa12.96□□□□□ -0.33
NIPAL3-207ENST00000488155 TRAF7Q6Q0C0 670 aa12.96□□□□□ -0.33
NIPAL3-207ENST00000488155 Q6ZUG5 572 aa12.96□□□□□ -0.33
NIPAL3-207ENST00000488155 SPRED2Q7Z698 418 aa12.96□□□□□ -0.33
NIPAL3-207ENST00000488155 SENP7Q9BQF6 1050 aa12.96□□□□□ -0.33
NIPAL3-207ENST00000488155 ZBED2Q9BTP6 218 aa12.96□□□□□ -0.33
NIPAL3-207ENST00000488155 USP26Q9BXU7 913 aa12.96□□□□□ -0.33
NIPAL3-207ENST00000488155 FAM217BQ9NTX9 383 aaPredicted RBP12.96□□□□□ -0.33
NIPAL3-207ENST00000488155 COL4A4P53420 1690 aaPredicted RBP12.96□□□□□ -0.34
NIPAL3-207ENST00000488155 VCANP13611 3396 aa12.95□□□□□ -0.34
NIPAL3-207ENST00000488155 KIF28PB7ZC32 967 aa12.95□□□□□ -0.34
NIPAL3-207ENST00000488155 TLL1O43897 1013 aa12.95□□□□□ -0.34
NIPAL3-207ENST00000488155 PPFIA3O75145 1194 aa12.95□□□□□ -0.34
NIPAL3-207ENST00000488155 BAIAP3O94812 1187 aa12.95□□□□□ -0.34
NIPAL3-207ENST00000488155 CXCL10P02778 98 aa12.95□□□□□ -0.34
NIPAL3-207ENST00000488155 KCNA2P16389 499 aa12.95□□□□□ -0.34
NIPAL3-207ENST00000488155 MARK3P27448 753 aa12.95□□□□□ -0.34
NIPAL3-207ENST00000488155 TCF7P36402 384 aaPredicted RBP12.95□□□□□ -0.34
NIPAL3-207ENST00000488155 ARHGAP4P98171 946 aa12.95□□□□□ -0.34
NIPAL3-207ENST00000488155 RBL2Q08999 1139 aa12.95□□□□□ -0.34
NIPAL3-207ENST00000488155 FUT2Q10981 343 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms