RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 TIMP1P01033 207 aa27.03■■□□□ 1.92
RHBDD3-205ENST00000488106 HOXD8P13378 290 aaPredicted RBP27.03■■□□□ 1.92
RHBDD3-205ENST00000488106 KCNA2P16389 499 aa27.03■■□□□ 1.92
RHBDD3-205ENST00000488106 PSEN2P49810 448 aa27.03■■□□□ 1.92
RHBDD3-205ENST00000488106 NLRP5P59047 1200 aa27.03■■□□□ 1.92
RHBDD3-205ENST00000488106 ME3Q16798 604 aa27.03■■□□□ 1.92
RHBDD3-205ENST00000488106 CYP2W1Q8TAV3 490 aa27.03■■□□□ 1.92
RHBDD3-205ENST00000488106 BICD2Q8TD16 824 aa27.03■■□□□ 1.92
RHBDD3-205ENST00000488106 SENP7Q9BQF6 1050 aa27.03■■□□□ 1.92
RHBDD3-205ENST00000488106 MXRA8Q9BRK3 442 aa27.03■■□□□ 1.92
RHBDD3-205ENST00000488106 KATNAL1Q9BW62 490 aa27.03■■□□□ 1.92
RHBDD3-205ENST00000488106 C22orf23Q9BZE7 217 aa27.03■■□□□ 1.92
RHBDD3-205ENST00000488106 TELO2Q9Y4R8 837 aa27.03■■□□□ 1.92
RHBDD3-205ENST00000488106 GBF1Q92538 1859 aa27.02■■□□□ 1.92
RHBDD3-205ENST00000488106 PPFIA4O75335 1185 aa27.02■■□□□ 1.92
RHBDD3-205ENST00000488106 ZNF76P36508 570 aa27.02■■□□□ 1.92
RHBDD3-205ENST00000488106 ARHGAP4P98171 946 aa27.02■■□□□ 1.92
RHBDD3-205ENST00000488106 MFSD10Q14728 455 aa27.02■■□□□ 1.92
RHBDD3-205ENST00000488106 HIPK3Q9H422 1215 aa27.02■■□□□ 1.92
RHBDD3-205ENST00000488106 STK36Q9NRP7 1315 aa27.01■■□□□ 1.91
RHBDD3-205ENST00000488106 CYP2C9P11712 490 aa27.01■■□□□ 1.91
RHBDD3-205ENST00000488106 CYP2C18P33260 490 aa27.01■■□□□ 1.91
RHBDD3-205ENST00000488106 FPGSQ05932 587 aa27.01■■□□□ 1.91
RHBDD3-205ENST00000488106 KIAA0753Q2KHM9 967 aa27.01■■□□□ 1.91
RHBDD3-205ENST00000488106 GIMAP8Q8ND71 665 aaPredicted RBP27.01■■□□□ 1.91
RHBDD3-205ENST00000488106 GTF3C6Q969F1 213 aa27.01■■□□□ 1.91
RHBDD3-205ENST00000488106 GPR20Q99678 358 aa27.01■■□□□ 1.91
RHBDD3-205ENST00000488106 TET1Q8NFU7 2136 aa27.01■■□□□ 1.91
RHBDD3-205ENST00000488106 UMODL1Q5DID0 1318 aa27■■□□□ 1.91
RHBDD3-205ENST00000488106 CTDNEP1O95476 244 aa27■■□□□ 1.91
RHBDD3-205ENST00000488106 LGALS2P05162 132 aa27■■□□□ 1.91
RHBDD3-205ENST00000488106 FXR1P51114 621 aaKnown RBP eCLIP27■■□□□ 1.91
RHBDD3-205ENST00000488106 CEP55Q53EZ4 464 aa27■■□□□ 1.91
RHBDD3-205ENST00000488106 MCTP2Q6DN12 878 aa27■■□□□ 1.91
RHBDD3-205ENST00000488106 KCNH7Q9NS40 1196 aa27■■□□□ 1.91
RHBDD3-205ENST00000488106 SUPT20HL2P0C7V6 817 aa26.99■■□□□ 1.91
RHBDD3-205ENST00000488106 PTPN11Q06124 597 aaPredicted RBP26.99■■□□□ 1.91
RHBDD3-205ENST00000488106 GDF6Q6KF10 455 aaPredicted RBP26.99■■□□□ 1.91
RHBDD3-205ENST00000488106 TRIM50Q86XT4 487 aa26.99■■□□□ 1.91
RHBDD3-205ENST00000488106 C7orf31Q8N865 590 aa26.99■■□□□ 1.91
RHBDD3-205ENST00000488106 KIF2CQ99661 725 aa26.99■■□□□ 1.91
RHBDD3-205ENST00000488106 C16orf70Q9BSU1 422 aa26.99■■□□□ 1.91
RHBDD3-205ENST00000488106 NOC4LQ9BVI4 516 aaKnown RBP26.99■■□□□ 1.91
RHBDD3-205ENST00000488106 PCDHA4Q9UN74 947 aa26.99■■□□□ 1.91
RHBDD3-205ENST00000488106 NOD1Q9Y239 953 aa26.99■■□□□ 1.91
RHBDD3-205ENST00000488106 ARP10275 920 aa26.98■■□□□ 1.91
RHBDD3-205ENST00000488106 C9orf50Q5SZB4 431 aa26.98■■□□□ 1.91
RHBDD3-205ENST00000488106 UTP14CQ5TAP6 766 aaKnown RBP26.98■■□□□ 1.91
RHBDD3-205ENST00000488106 MFSD5Q6N075 450 aa26.98■■□□□ 1.91
RHBDD3-205ENST00000488106 HDAC6Q9UBN7 1215 aa26.98■■□□□ 1.91
RHBDD3-205ENST00000488106 LOXHD1Q8IVV2 1947 aa26.98■■□□□ 1.91
RHBDD3-205ENST00000488106 FAM86B1E9PN63 330 aa26.97■■□□□ 1.91
RHBDD3-205ENST00000488106 HAS3O00219 553 aa26.97■■□□□ 1.91
RHBDD3-205ENST00000488106 MAFGO15525 162 aa26.97■■□□□ 1.91
RHBDD3-205ENST00000488106 FAM86B2P0C5J1 330 aa26.97■■□□□ 1.91
RHBDD3-205ENST00000488106 EPHB4P54760 987 aa26.97■■□□□ 1.91
RHBDD3-205ENST00000488106 PTGISQ16647 500 aa26.97■■□□□ 1.91
RHBDD3-205ENST00000488106 CRYGNQ8WXF5 182 aa26.97■■□□□ 1.91
RHBDD3-205ENST00000488106 UPF2Q9HAU5 1272 aaKnown RBP26.97■■□□□ 1.91
RHBDD3-205ENST00000488106 ORC3Q9UBD5 711 aaPredicted RBP26.97■■□□□ 1.91
RHBDD3-205ENST00000488106 KCNJ14Q9UNX9 436 aa26.97■■□□□ 1.91
RHBDD3-205ENST00000488106 CSF2RAP15509 400 aa26.96■■□□□ 1.91
RHBDD3-205ENST00000488106 RBM25P49756 843 aaKnown RBP26.96■■□□□ 1.91
RHBDD3-205ENST00000488106 CCL23P55773 120 aa26.96■■□□□ 1.91
RHBDD3-205ENST00000488106 SHHQ15465 462 aa26.96■■□□□ 1.91
RHBDD3-205ENST00000488106 SESTD1Q86VW0 696 aa26.96■■□□□ 1.91
RHBDD3-205ENST00000488106 PLA2G4DQ86XP0 818 aa26.96■■□□□ 1.91
RHBDD3-205ENST00000488106 BLIDQ8IZY5 108 aa26.96■■□□□ 1.91
RHBDD3-205ENST00000488106 TMEM199Q8N511 208 aa26.96■■□□□ 1.91
RHBDD3-205ENST00000488106 UIMC1Q96RL1 719 aa26.96■■□□□ 1.91
RHBDD3-205ENST00000488106 SDF4Q9BRK5 362 aa26.96■■□□□ 1.91
RHBDD3-205ENST00000488106 AGO4Q9HCK5 861 aaKnown RBP26.96■■□□□ 1.91
RHBDD3-205ENST00000488106 JPH1Q9HDC5 661 aaPredicted RBP26.96■■□□□ 1.91
RHBDD3-205ENST00000488106 GTF2IRD1Q9UHL9 959 aa26.96■■□□□ 1.91
RHBDD3-205ENST00000488106 H3BRB1 525 aa26.95■■□□□ 1.9
RHBDD3-205ENST00000488106 MEIS1O00470 390 aa26.95■■□□□ 1.9
RHBDD3-205ENST00000488106 SOX1O00570 391 aaPredicted RBP26.95■■□□□ 1.9
RHBDD3-205ENST00000488106 CYP3A4P08684 503 aa26.95■■□□□ 1.9
RHBDD3-205ENST00000488106 TCF7P36402 384 aaPredicted RBP26.95■■□□□ 1.9
RHBDD3-205ENST00000488106 PPIGQ13427 754 aaKnown RBP eCLIP26.95■■□□□ 1.94e-6■□□□□ 10.7
RHBDD3-205ENST00000488106 WNT8AQ9H1J5 351 aa26.95■■□□□ 1.9
RHBDD3-205ENST00000488106 TUT1Q9H6E5 874 aaKnown RBP26.95■■□□□ 1.9
RHBDD3-205ENST00000488106 GJB4Q9NTQ9 266 aa26.95■■□□□ 1.9
RHBDD3-205ENST00000488106 EVPLQ92817 2033 aa26.95■■□□□ 1.9
RHBDD3-205ENST00000488106 IGLV3-22A0A075B6J6 115 aa26.94■■□□□ 1.9
RHBDD3-205ENST00000488106 ST3GAL1Q11201 340 aa26.94■■□□□ 1.9
RHBDD3-205ENST00000488106 ITGB3BPQ13352 177 aaPredicted RBP26.94■■□□□ 1.9
RHBDD3-205ENST00000488106 NIPA1Q7RTP0 329 aa26.94■■□□□ 1.9
RHBDD3-205ENST00000488106 DAGLBQ8NCG7 672 aa26.94■■□□□ 1.9
RHBDD3-205ENST00000488106 SLC9A2Q9UBY0 812 aa26.94■■□□□ 1.9
RHBDD3-205ENST00000488106 ZNF215Q9UL58 517 aaPredicted RBP26.94■■□□□ 1.9
RHBDD3-205ENST00000488106 LIMCH1Q9UPQ0 1083 aa26.94■■□□□ 1.9
RHBDD3-205ENST00000488106 GTF3C3Q9Y5Q9 886 aa26.94■■□□□ 1.9
RHBDD3-205ENST00000488106 NFASCO94856 1347 aa26.93■■□□□ 1.9
RHBDD3-205ENST00000488106 SIP14410 1827 aa26.93■■□□□ 1.9
RHBDD3-205ENST00000488106 DDX39AO00148 427 aaKnown RBP26.93■■□□□ 1.9
RHBDD3-205ENST00000488106 JAK2O60674 1132 aa26.93■■□□□ 1.9
RHBDD3-205ENST00000488106 XBP1P17861 261 aa26.93■■□□□ 1.9
RHBDD3-205ENST00000488106 NPY5RQ15761 445 aa26.93■■□□□ 1.9
RHBDD3-205ENST00000488106 FAM177A1Q8N128 213 aaPredicted RBP26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms