RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 C2orf69Q8N8R5 385 aa5.5□□□□□ -1.53
ECHDC1-217ENST00000488087 UHMK1Q8TAS1 419 aaKnown RBP5.5□□□□□ -1.53
ECHDC1-217ENST00000488087 PHOSPHO1Q8TCT1 267 aa5.5□□□□□ -1.53
ECHDC1-217ENST00000488087 DDX1Q92499 740 aaKnown RBP5.5□□□□□ -1.53
ECHDC1-217ENST00000488087 TARS2Q9BW92 718 aaKnown RBP5.5□□□□□ -1.53
ECHDC1-217ENST00000488087 MCOLN1Q9GZU1 580 aa5.5□□□□□ -1.53
ECHDC1-217ENST00000488087 CABP5Q9NP86 173 aa5.5□□□□□ -1.53
ECHDC1-217ENST00000488087 PRKAB1Q9Y478 270 aa5.5□□□□□ -1.53
ECHDC1-217ENST00000488087 MYOCOSA0A1B0GUC4 107 aa5.49□□□□□ -1.53
ECHDC1-217ENST00000488087 KCNK3O14649 394 aa5.49□□□□□ -1.53
ECHDC1-217ENST00000488087 TADA3O75528 432 aa5.49□□□□□ -1.53
ECHDC1-217ENST00000488087 GLRX3O76003 335 aaKnown RBP5.49□□□□□ -1.53
ECHDC1-217ENST00000488087 KCNA6P17658 529 aa5.49□□□□□ -1.53
ECHDC1-217ENST00000488087 MASP1P48740 699 aa5.49□□□□□ -1.53
ECHDC1-217ENST00000488087 JAM2P57087 298 aa5.49□□□□□ -1.53
ECHDC1-217ENST00000488087 CDCA2Q69YH5 1023 aaPredicted RBP5.49□□□□□ -1.53
ECHDC1-217ENST00000488087 CYP4F22Q6NT55 531 aa5.49□□□□□ -1.53
ECHDC1-217ENST00000488087 ZNF662Q6ZS27 426 aa5.49□□□□□ -1.53
ECHDC1-217ENST00000488087 TRIM48Q8IWZ4 208 aa5.49□□□□□ -1.53
ECHDC1-217ENST00000488087 KCNN1Q92952 543 aa5.49□□□□□ -1.53
ECHDC1-217ENST00000488087 DDX11Q96FC9 970 aa5.49□□□□□ -1.53
ECHDC1-217ENST00000488087 SGPP1Q9BX95 441 aa5.49□□□□□ -1.53
ECHDC1-217ENST00000488087 CD244Q9BZW8 370 aa5.49□□□□□ -1.53
ECHDC1-217ENST00000488087 ASH2LQ9UBL3 628 aa5.49□□□□□ -1.53
ECHDC1-217ENST00000488087 TEX51A0A1B0GUA7 166 aa5.48□□□□□ -1.53
ECHDC1-217ENST00000488087 TCRBV5S2A0A599 114 aa5.48□□□□□ -1.53
ECHDC1-217ENST00000488087 TCRBV5S4A2TA0A5A2 114 aa5.48□□□□□ -1.53
ECHDC1-217ENST00000488087 ZNF561-AS1K7EIQ3 104 aa5.48□□□□□ -1.53
ECHDC1-217ENST00000488087 SEMA7AO75326 666 aa5.48□□□□□ -1.53
ECHDC1-217ENST00000488087 LTFP02788 710 aa5.48□□□□□ -1.53
ECHDC1-217ENST00000488087 PFKLP17858 780 aa5.48□□□□□ -1.53
ECHDC1-217ENST00000488087 PMLP29590 882 aa5.48□□□□□ -1.53
ECHDC1-217ENST00000488087 CNGA1P29973 690 aa5.48□□□□□ -1.53
ECHDC1-217ENST00000488087 NCKAP1LP55160 1127 aa5.48□□□□□ -1.53
ECHDC1-217ENST00000488087 LACTBP83111 547 aaPredicted RBP5.48□□□□□ -1.53
ECHDC1-217ENST00000488087 TUSC3Q13454 348 aa5.48□□□□□ -1.53
ECHDC1-217ENST00000488087 CT47A1Q5JQC4 288 aaPredicted RBP5.48□□□□□ -1.53
ECHDC1-217ENST00000488087 HABP4Q5JVS0 413 aaKnown RBP5.48□□□□□ -1.53
ECHDC1-217ENST00000488087 ETV3LQ6ZN32 361 aa5.48□□□□□ -1.53
ECHDC1-217ENST00000488087 KCTD1Q719H9 257 aa5.48□□□□□ -1.53
ECHDC1-217ENST00000488087 OVCH1Q7RTY7 1134 aa5.48□□□□□ -1.53
ECHDC1-217ENST00000488087 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.48□□□□□ -1.53
ECHDC1-217ENST00000488087 FILIP1Q7Z7B0 1213 aa5.48□□□□□ -1.53
ECHDC1-217ENST00000488087 AMIGO3Q86WK7 504 aa5.48□□□□□ -1.53
ECHDC1-217ENST00000488087 NLGN4XQ8N0W4 816 aa5.48□□□□□ -1.53
ECHDC1-217ENST00000488087 ARRDC4Q8NCT1 418 aa5.48□□□□□ -1.53
ECHDC1-217ENST00000488087 CNTD2Q9H8S5 307 aa5.48□□□□□ -1.53
ECHDC1-217ENST00000488087 SPC25Q9HBM1 224 aa5.48□□□□□ -1.53
ECHDC1-217ENST00000488087 MBD1Q9UIS9 605 aaPredicted RBP5.48□□□□□ -1.53
ECHDC1-217ENST00000488087 PLA2G2DQ9UNK4 145 aa5.48□□□□□ -1.53
ECHDC1-217ENST00000488087 SRPK3Q9UPE1 567 aa5.48□□□□□ -1.53
ECHDC1-217ENST00000488087 FAN1Q9Y2M0 1017 aa5.48□□□□□ -1.53
ECHDC1-217ENST00000488087 A0A087X0B3 334 aa5.47□□□□□ -1.53
ECHDC1-217ENST00000488087 ANKRD62A6NC57 917 aa5.47□□□□□ -1.53
ECHDC1-217ENST00000488087 KRT37O76014 449 aa5.47□□□□□ -1.53
ECHDC1-217ENST00000488087 FARP2O94887 1054 aaPredicted RBP5.47□□□□□ -1.53
ECHDC1-217ENST00000488087 AMY2AP04746 511 aa5.47□□□□□ -1.53
ECHDC1-217ENST00000488087 ASGR2P07307 311 aa5.47□□□□□ -1.53
ECHDC1-217ENST00000488087 NCAM1P13591 858 aa5.47□□□□□ -1.53
ECHDC1-217ENST00000488087 AMY2BP19961 511 aa5.47□□□□□ -1.53
ECHDC1-217ENST00000488087 SOX5P35711 763 aa5.47□□□□□ -1.53
ECHDC1-217ENST00000488087 GRIN1Q05586 938 aa5.47□□□□□ -1.53
ECHDC1-217ENST00000488087 SART3Q15020 963 aaKnown RBP5.47□□□□□ -1.53
ECHDC1-217ENST00000488087 TARBP2Q15633 366 aaKnown RBP5.47□□□□□ -1.53
ECHDC1-217ENST00000488087 FIGNQ5HY92 759 aa5.47□□□□□ -1.53
ECHDC1-217ENST00000488087 PKN3Q6P5Z2 889 aa5.47□□□□□ -1.53
ECHDC1-217ENST00000488087 SYDE1Q6ZW31 735 aaPredicted RBP5.47□□□□□ -1.53
ECHDC1-217ENST00000488087 LDHDQ86WU2 507 aa5.47□□□□□ -1.53
ECHDC1-217ENST00000488087 UBR7Q8N806 425 aa5.47□□□□□ -1.53
ECHDC1-217ENST00000488087 CHST14Q8NCH0 376 aa5.47□□□□□ -1.53
ECHDC1-217ENST00000488087 CHAC2Q8WUX2 184 aa5.47□□□□□ -1.53
ECHDC1-217ENST00000488087 LEO1Q8WVC0 666 aaPredicted RBP5.47□□□□□ -1.53
ECHDC1-217ENST00000488087 SMURF1Q9HCE7 757 aa5.47□□□□□ -1.53
ECHDC1-217ENST00000488087 MAPRE3Q9UPY8 281 aa5.47□□□□□ -1.53
ECHDC1-217ENST00000488087 ZKSCAN5Q9Y2L8 839 aa5.47□□□□□ -1.53
ECHDC1-217ENST00000488087 ATP23Q9Y6H3 246 aa5.47□□□□□ -1.53
ECHDC1-217ENST00000488087 SLC12A8A0AV02 714 aa5.46□□□□□ -1.54
ECHDC1-217ENST00000488087 PTPDC1A2A3K4 754 aa5.46□□□□□ -1.54
ECHDC1-217ENST00000488087 GSG1L2A8MUP6 293 aa5.46□□□□□ -1.54
ECHDC1-217ENST00000488087 MAN2B1O00754 1011 aa5.46□□□□□ -1.54
ECHDC1-217ENST00000488087 GAS7O60861 476 aa5.46□□□□□ -1.54
ECHDC1-217ENST00000488087 DNAJC6O75061 913 aa5.46□□□□□ -1.54
ECHDC1-217ENST00000488087 HIP1RO75146 1068 aa5.46□□□□□ -1.54
ECHDC1-217ENST00000488087 TMEM253P0C7T8 217 aa5.46□□□□□ -1.54
ECHDC1-217ENST00000488087 POU3F2P20265 443 aaPredicted RBP5.46□□□□□ -1.54
ECHDC1-217ENST00000488087 MC3RP41968 323 aa5.46□□□□□ -1.54
ECHDC1-217ENST00000488087 STAT5AP42229 794 aa5.46□□□□□ -1.54
ECHDC1-217ENST00000488087 CDR1P51861 262 aa5.46□□□□□ -1.54
ECHDC1-217ENST00000488087 DLG4P78352 724 aa5.46□□□□□ -1.54
ECHDC1-217ENST00000488087 PCBP1Q15365 356 aaKnown RBP eCLIP5.46□□□□□ -1.54
ECHDC1-217ENST00000488087 ARHGAP44Q17R89 818 aa5.46□□□□□ -1.54
ECHDC1-217ENST00000488087 BTBD8Q5XKL5 378 aa5.46□□□□□ -1.54
ECHDC1-217ENST00000488087 CD300LDQ6UXZ3 194 aa5.46□□□□□ -1.54
ECHDC1-217ENST00000488087 ZC3H18Q86VM9 953 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-217ENST00000488087 THNSL2Q86YJ6 484 aa5.46□□□□□ -1.54
ECHDC1-217ENST00000488087 FAM126BQ8IXS8 530 aa5.46□□□□□ -1.54
ECHDC1-217ENST00000488087 SH3RF2Q8TEC5 729 aa5.46□□□□□ -1.54
ECHDC1-217ENST00000488087 MZB1Q8WU39 189 aa5.46□□□□□ -1.54
ECHDC1-217ENST00000488087 CLEC4DQ8WXI8 215 aa5.46□□□□□ -1.54
ECHDC1-217ENST00000488087 TOE1Q96GM8 510 aaKnown RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms