RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 CNKSR3Q6P9H4 555 aa27.1■■□□□ 1.93
PLOD3-215ENST00000487563 ZNF215Q9UL58 517 aaPredicted RBP27.1■■□□□ 1.93
PLOD3-215ENST00000487563 ZBTB43O43298 467 aa27.09■■□□□ 1.93
PLOD3-215ENST00000487563 CA3P07451 260 aa27.09■■□□□ 1.93
PLOD3-215ENST00000487563 HERC6Q8IVU3 1022 aa27.09■■□□□ 1.93
PLOD3-215ENST00000487563 RASEFQ8IZ41 740 aa27.09■■□□□ 1.93
PLOD3-215ENST00000487563 USP38Q8NB14 1042 aa27.09■■□□□ 1.93
PLOD3-215ENST00000487563 GIMAP8Q8ND71 665 aaPredicted RBP27.09■■□□□ 1.93
PLOD3-215ENST00000487563 ATP6V0A1Q93050 837 aa27.09■■□□□ 1.93
PLOD3-215ENST00000487563 CDHR1Q96JP9 859 aa27.09■■□□□ 1.93
PLOD3-215ENST00000487563 GPR20Q99678 358 aa27.09■■□□□ 1.93
PLOD3-215ENST00000487563 COL25A1Q9BXS0 654 aaPredicted RBP27.09■■□□□ 1.93
PLOD3-215ENST00000487563 EHMT1Q9H9B1 1298 aa27.09■■□□□ 1.93
PLOD3-215ENST00000487563 MYO9BQ13459 2157 aa27.09■■□□□ 1.93
PLOD3-215ENST00000487563 TET1Q8NFU7 2136 aa27.08■■□□□ 1.93
PLOD3-215ENST00000487563 SMIM10L2AP0DMW4 78 aa27.08■■□□□ 1.93
PLOD3-215ENST00000487563 SMIM10L2BP0DMW5 78 aa27.08■■□□□ 1.93
PLOD3-215ENST00000487563 FGD1P98174 961 aa27.08■■□□□ 1.93
PLOD3-215ENST00000487563 EXOSC10Q01780 885 aaKnown RBP27.08■■□□□ 1.93
PLOD3-215ENST00000487563 TRIM71Q2Q1W2 868 aaKnown RBP27.08■■□□□ 1.93
PLOD3-215ENST00000487563 ADCK5Q3MIX3 580 aa27.08■■□□□ 1.93
PLOD3-215ENST00000487563 ZNF618Q5T7W0 954 aa27.08■■□□□ 1.93
PLOD3-215ENST00000487563 UTP14CQ5TAP6 766 aaKnown RBP27.08■■□□□ 1.93
PLOD3-215ENST00000487563 WNT8BQ93098 351 aa27.08■■□□□ 1.93
PLOD3-215ENST00000487563 GPRASP2Q96D09 838 aa27.08■■□□□ 1.93
PLOD3-215ENST00000487563 SENP7Q9BQF6 1050 aa27.08■■□□□ 1.93
PLOD3-215ENST00000487563 NAP1L2Q9ULW6 460 aaPredicted RBP27.08■■□□□ 1.93
PLOD3-215ENST00000487563 CNTNAP5Q8WYK1 1306 aa27.08■■□□□ 1.93
PLOD3-215ENST00000487563 DOCK5Q9H7D0 1870 aa27.08■■□□□ 1.93
PLOD3-215ENST00000487563 GOLGA8AA7E2F4 631 aa27.07■■□□□ 1.92
PLOD3-215ENST00000487563 GOLGA8BA8MQT2 603 aa27.07■■□□□ 1.92
PLOD3-215ENST00000487563 NBNO60934 754 aa27.07■■□□□ 1.92
PLOD3-215ENST00000487563 CXCL10P02778 98 aa27.07■■□□□ 1.92
PLOD3-215ENST00000487563 HMGB1P09429 215 aaKnown RBP27.07■■□□□ 1.92
PLOD3-215ENST00000487563 THPOP40225 353 aa27.07■■□□□ 1.92
PLOD3-215ENST00000487563 ADGRE1Q14246 886 aa27.07■■□□□ 1.92
PLOD3-215ENST00000487563 HIC1Q14526 733 aa27.07■■□□□ 1.92
PLOD3-215ENST00000487563 GPNMBQ14956 572 aa27.07■■□□□ 1.92
PLOD3-215ENST00000487563 TSGA10IPQ3SY00 556 aa27.07■■□□□ 1.92
PLOD3-215ENST00000487563 SERINC5Q86VE9 423 aa27.07■■□□□ 1.92
PLOD3-215ENST00000487563 TRIM50Q86XT4 487 aa27.07■■□□□ 1.92
PLOD3-215ENST00000487563 BRPF3Q9ULD4 1205 aa27.07■■□□□ 1.92
PLOD3-215ENST00000487563 KLF18A0A0U1RQI7 1052 aa27.06■■□□□ 1.92
PLOD3-215ENST00000487563 NAPAP54920 295 aa27.06■■□□□ 1.92
PLOD3-215ENST00000487563 WDR5P61964 334 aaKnown RBP27.06■■□□□ 1.92
PLOD3-215ENST00000487563 PCDHA6Q9UN73 950 aa27.06■■□□□ 1.92
PLOD3-215ENST00000487563 PCDHA8Q9Y5H6 950 aa27.06■■□□□ 1.92
PLOD3-215ENST00000487563 CUL9Q8IWT3 2517 aa27.06■■□□□ 1.92
PLOD3-215ENST00000487563 TLL1O43897 1013 aa27.05■■□□□ 1.92
PLOD3-215ENST00000487563 GNAT1P11488 350 aa27.05■■□□□ 1.92
PLOD3-215ENST00000487563 WWC2Q6AWC2 1192 aa27.05■■□□□ 1.92
PLOD3-215ENST00000487563 ZBED2Q9BTP6 218 aa27.05■■□□□ 1.92
PLOD3-215ENST00000487563 EMSYQ7Z589 1322 aa27.05■■□□□ 1.92
PLOD3-215ENST00000487563 CHD9Q3L8U1 2897 aa27.04■■□□□ 1.92
PLOD3-215ENST00000487563 ABHD14A-ACY1A0A1B0GW23 586 aa27.04■■□□□ 1.92
PLOD3-215ENST00000487563 RSPH10B2B2RC85 870 aa27.04■■□□□ 1.92
PLOD3-215ENST00000487563 EFCAB14O75071 495 aa27.04■■□□□ 1.92
PLOD3-215ENST00000487563 RSPH10BP0C881 870 aa27.04■■□□□ 1.92
PLOD3-215ENST00000487563 MTMR1Q13613 665 aa27.04■■□□□ 1.92
PLOD3-215ENST00000487563 IKBKEQ14164 716 aa27.04■■□□□ 1.92
PLOD3-215ENST00000487563 CCDC85BQ15834 202 aaPredicted RBP27.04■■□□□ 1.92
PLOD3-215ENST00000487563 PPP1R18Q6NYC8 613 aa27.04■■□□□ 1.92
PLOD3-215ENST00000487563 RNPEPQ9H4A4 650 aa27.04■■□□□ 1.92
PLOD3-215ENST00000487563 PKD2L1Q9P0L9 805 aa27.04■■□□□ 1.92
PLOD3-215ENST00000487563 TREHO43280 583 aa27.03■■□□□ 1.92
PLOD3-215ENST00000487563 ITGB5P18084 799 aa27.03■■□□□ 1.92
PLOD3-215ENST00000487563 TRAF7Q6Q0C0 670 aa27.03■■□□□ 1.92
PLOD3-215ENST00000487563 MICALL1Q8N3F8 863 aa27.03■■□□□ 1.92
PLOD3-215ENST00000487563 CERS4Q9HA82 394 aa27.03■■□□□ 1.92
PLOD3-215ENST00000487563 SETD4Q9NVD3 440 aa27.03■■□□□ 1.92
PLOD3-215ENST00000487563 TELO2Q9Y4R8 837 aa27.03■■□□□ 1.92
PLOD3-215ENST00000487563 UBIAD1Q9Y5Z9 338 aa27.03■■□□□ 1.92
PLOD3-215ENST00000487563 V9GY48 417 aaPredicted RBP27.03■■□□□ 1.92
PLOD3-215ENST00000487563 LGR5O75473 907 aa27.02■■□□□ 1.92
PLOD3-215ENST00000487563 KCNA2P16389 499 aa27.02■■□□□ 1.92
PLOD3-215ENST00000487563 HOXC8P31273 242 aa27.02■■□□□ 1.92
PLOD3-215ENST00000487563 TCF7P36402 384 aaPredicted RBP27.02■■□□□ 1.92
PLOD3-215ENST00000487563 ADCY7P51828 1080 aa27.02■■□□□ 1.92
PLOD3-215ENST00000487563 DEFB103AP81534 67 aa27.02■■□□□ 1.92
PLOD3-215ENST00000487563 MBTPS1Q14703 1052 aa27.02■■□□□ 1.92
PLOD3-215ENST00000487563 PRUNE2Q8WUY3 3088 aa27.02■■□□□ 1.92
PLOD3-215ENST00000487563 hCG_1984214I3L0E3 225 aa27.01■■□□□ 1.91
PLOD3-215ENST00000487563 ATP9AO75110 1047 aa27.01■■□□□ 1.91
PLOD3-215ENST00000487563 ARHGAP4P98171 946 aa27.01■■□□□ 1.91
PLOD3-215ENST00000487563 ZNF713Q8N859 430 aaPredicted RBP27.01■■□□□ 1.91
PLOD3-215ENST00000487563 JAKMIP1Q96N16 626 aaKnown RBP27.01■■□□□ 1.91
PLOD3-215ENST00000487563 RIC8AQ9NPQ8 531 aa27.01■■□□□ 1.91
PLOD3-215ENST00000487563 JADE2Q9NQC1 790 aa27.01■■□□□ 1.91
PLOD3-215ENST00000487563 CAND2O75155 1236 aa27■■□□□ 1.91
PLOD3-215ENST00000487563 CTSHP09668 335 aa27■■□□□ 1.91
PLOD3-215ENST00000487563 RCAN1P53805 252 aa27■■□□□ 1.91
PLOD3-215ENST00000487563 TAP1Q03518 808 aa27■■□□□ 1.91
PLOD3-215ENST00000487563 TCTN1Q2MV58 587 aa27■■□□□ 1.91
PLOD3-215ENST00000487563 TMCO2Q7Z6W1 182 aaPredicted RBP27■■□□□ 1.91
PLOD3-215ENST00000487563 ARNTL2Q8WYA1 636 aa27■■□□□ 1.91
PLOD3-215ENST00000487563 SEPT1Q8WYJ6 367 aa27■■□□□ 1.91
PLOD3-215ENST00000487563 PRDM6Q9NQX0 595 aa27■■□□□ 1.91
PLOD3-215ENST00000487563 PTPRSQ13332 1948 aa26.99■■□□□ 1.91
PLOD3-215ENST00000487563 STXBP3O00186 592 aa26.99■■□□□ 1.91
PLOD3-215ENST00000487563 MAFGO15525 162 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms