RNA–Protein interactions for RNA: ENST00000486417.5

TMC1-204, Transcript of transmembrane channel like 1, humanhuman

TSL 2

Gene TMC1, Length 1,528 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-204ENST00000486417 LOC285556D6RIA3 1793 aa8.14□□□□□ -1.11
TMC1-204ENST00000486417 PP2D1A8MPX8 630 aa8.14□□□□□ -1.11
TMC1-204ENST00000486417 SMTNL1A8MU46 457 aa8.14□□□□□ -1.11
TMC1-204ENST00000486417 SLC37A4O43826 429 aa8.14□□□□□ -1.11
TMC1-204ENST00000486417 PLA2G6O60733 806 aa8.14□□□□□ -1.11
TMC1-204ENST00000486417 SMC2O95347 1197 aa8.14□□□□□ -1.11
TMC1-204ENST00000486417 LMNB1P20700 586 aa8.14□□□□□ -1.11
TMC1-204ENST00000486417 BMP6P22004 513 aa8.14□□□□□ -1.11
TMC1-204ENST00000486417 CDC25BP30305 580 aa8.14□□□□□ -1.11
TMC1-204ENST00000486417 AFMP43652 599 aa8.14□□□□□ -1.11
TMC1-204ENST00000486417 SCTRP47872 440 aa8.14□□□□□ -1.11
TMC1-204ENST00000486417 AP3B2Q13367 1082 aa8.14□□□□□ -1.11
TMC1-204ENST00000486417 NCAPHQ15003 741 aa8.14□□□□□ -1.11
TMC1-204ENST00000486417 KARSQ15046 597 aaKnown RBP8.14□□□□□ -1.11
TMC1-204ENST00000486417 CALCRLQ16602 461 aa8.14□□□□□ -1.11
TMC1-204ENST00000486417 CCDC84Q86UT8 332 aaPredicted RBP8.14□□□□□ -1.11
TMC1-204ENST00000486417 ZSCAN30Q86W11 494 aa8.14□□□□□ -1.11
TMC1-204ENST00000486417 TRPM4Q8TD43 1214 aa8.14□□□□□ -1.11
TMC1-204ENST00000486417 AK8Q96MA6 479 aa8.14□□□□□ -1.11
TMC1-204ENST00000486417 GLIS2Q9BZE0 524 aaPredicted RBP8.14□□□□□ -1.11
TMC1-204ENST00000486417 CCSER1Q9C0I3 900 aa8.14□□□□□ -1.11
TMC1-204ENST00000486417 RANBP17Q9H2T7 1088 aaKnown RBP8.14□□□□□ -1.11
TMC1-204ENST00000486417 DISC1Q9NRI5 854 aa8.14□□□□□ -1.11
TMC1-204ENST00000486417 GINM1Q9NU53 330 aa8.14□□□□□ -1.11
TMC1-204ENST00000486417 NOD1Q9Y239 953 aa8.14□□□□□ -1.11
TMC1-204ENST00000486417 PCDHGA11Q9Y5H2 935 aa8.14□□□□□ -1.11
TMC1-204ENST00000486417 SFI1A8K8P3 1242 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 MEIS2O14770 477 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 STAU1O95793 577 aaKnown RBP8.13□□□□□ -1.11
TMC1-204ENST00000486417 GCFC2P16383 781 aaKnown RBP8.13□□□□□ -1.11
TMC1-204ENST00000486417 TAL1P17542 331 aaPredicted RBP8.13□□□□□ -1.11
TMC1-204ENST00000486417 ERCC3P19447 782 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 CASP1P29466 404 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 CDC25AP30304 524 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 STAT6P42226 847 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 TPM4P67936 248 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 MYL5Q02045 173 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 ZYXQ15942 572 aaKnown RBP8.13□□□□□ -1.11
TMC1-204ENST00000486417 USH1GQ495M9 461 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 MCTP2Q6DN12 878 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 PPP4R3AQ6IN85 833 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 USP17L6PQ6QN14 398 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 ARHGAP27Q6ZUM4 889 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 CABP7Q86V35 215 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 FAM160B2Q86V87 743 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 APOBEC3FQ8IUX4 373 aaKnown RBP8.13□□□□□ -1.11
TMC1-204ENST00000486417 TRMT44Q8IYL2 757 aaKnown RBP8.13□□□□□ -1.11
TMC1-204ENST00000486417 GPC2Q8N158 579 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 ZNF592Q92610 1267 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 MRRFQ96E11 262 aaKnown RBP8.13□□□□□ -1.11
TMC1-204ENST00000486417 MRFAP1L1Q96HT8 127 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 MTMR9Q96QG7 549 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 NAP1L4Q99733 375 aaKnown RBP8.13□□□□□ -1.11
TMC1-204ENST00000486417 ZNF341Q9BYN7 854 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 TRIM5Q9C035 493 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 FHDC1Q9C0D6 1143 aaPredicted RBP8.13□□□□□ -1.11
TMC1-204ENST00000486417 DEFB129Q9H1M3 183 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 DACH1Q9UI36 760 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 ZKSCAN5Q9Y2L8 839 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 H7C1D1 291 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 OPLAHO14841 1288 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 LZTS3O60299 673 aaPredicted RBP8.13□□□□□ -1.11
TMC1-204ENST00000486417 CTNND1O60716 968 aaKnown RBP8.13□□□□□ -1.11
TMC1-204ENST00000486417 UBA7P41226 1012 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 TMEM266Q2M3C6 531 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 NAALADL2Q58DX5 795 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 ANGEL2Q5VTE6 544 aaKnown RBP8.13□□□□□ -1.11
TMC1-204ENST00000486417 RRAGBQ5VZM2 374 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 DCAF15Q66K64 600 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 IGSF22Q8N9C0 903 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 ANKLE1Q8NAG6 615 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 MLKLQ8NB16 471 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 SPC24Q8NBT2 197 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 RASSF8Q8NHQ8 419 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 CHURC1Q8WUH1 139 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 STAMQ92783 540 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 RNF166Q96A37 237 aaPredicted RBP8.13□□□□□ -1.11
TMC1-204ENST00000486417 MBOAT7Q96N66 472 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 GSDMAQ96QA5 445 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 KCTD15Q96SI1 283 aaPredicted RBP8.13□□□□□ -1.11
TMC1-204ENST00000486417 FEZ1Q99689 392 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 MAGEF1Q9HAY2 307 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 GPRC5DQ9NZD1 345 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 KIAA1522Q9P206 1035 aaPredicted RBP8.13□□□□□ -1.11
TMC1-204ENST00000486417 DDX25Q9UHL0 483 aaKnown RBP8.13□□□□□ -1.11
TMC1-204ENST00000486417 FEM1BQ9UK73 627 aa8.13□□□□□ -1.11
TMC1-204ENST00000486417 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.13□□□□□ -1.11
TMC1-204ENST00000486417 COL11A1P12107 1806 aaPredicted RBP8.12□□□□□ -1.11
TMC1-204ENST00000486417 GOLGB1Q14789 3259 aaKnown RBP8.12□□□□□ -1.11
TMC1-204ENST00000486417 RLFQ13129 1914 aa8.12□□□□□ -1.11
TMC1-204ENST00000486417 SMCHD1A6NHR9 2005 aa8.12□□□□□ -1.11
TMC1-204ENST00000486417 GOLGA6L6A8MZA4 724 aa8.12□□□□□ -1.11
TMC1-204ENST00000486417 WDR46O15213 610 aaKnown RBP8.12□□□□□ -1.11
TMC1-204ENST00000486417 PLCG1P19174 1290 aa8.12□□□□□ -1.11
TMC1-204ENST00000486417 MSNP26038 577 aaKnown RBP8.12□□□□□ -1.11
TMC1-204ENST00000486417 INPP5BP32019 993 aa8.12□□□□□ -1.11
TMC1-204ENST00000486417 TECP42680 631 aa8.12□□□□□ -1.11
TMC1-204ENST00000486417 TXKP42681 527 aa8.12□□□□□ -1.11
TMC1-204ENST00000486417 TRAF1Q13077 416 aa8.12□□□□□ -1.11
TMC1-204ENST00000486417 CUL4BQ13620 913 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms