RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 CMTR1Q8N1G2 835 aaKnown RBP25.82■■□□□ 1.72
SREBF1-214ENST00000486311 GPR20Q99678 358 aa25.82■■□□□ 1.72
SREBF1-214ENST00000486311 USP26Q9BXU7 913 aa25.82■■□□□ 1.72
SREBF1-214ENST00000486311 ABHD14A-ACY1A0A1B0GW23 586 aa25.81■■□□□ 1.72
SREBF1-214ENST00000486311 C17orf102A2RUQ5 167 aa25.81■■□□□ 1.72
SREBF1-214ENST00000486311 MBTPS1Q14703 1052 aa25.81■■□□□ 1.72
SREBF1-214ENST00000486311 TCTN1Q2MV58 587 aa25.81■■□□□ 1.72
SREBF1-214ENST00000486311 CENPQQ7L2Z9 268 aaPredicted RBP25.81■■□□□ 1.72
SREBF1-214ENST00000486311 ATXN2LQ8WWM7 1075 aaKnown RBP25.81■■□□□ 1.72
SREBF1-214ENST00000486311 SENP7Q9BQF6 1050 aa25.81■■□□□ 1.72
SREBF1-214ENST00000486311 LRRC2Q9BYS8 371 aa25.81■■□□□ 1.72
SREBF1-214ENST00000486311 PSTPIP2Q9H939 334 aa25.81■■□□□ 1.72
SREBF1-214ENST00000486311 THEGQ9P2T0 379 aa25.81■■□□□ 1.72
SREBF1-214ENST00000486311 TLL1O43897 1013 aa25.8■■□□□ 1.72
SREBF1-214ENST00000486311 ARHGEF15O94989 841 aa25.8■■□□□ 1.72
SREBF1-214ENST00000486311 SMIM10L2AP0DMW4 78 aa25.8■■□□□ 1.72
SREBF1-214ENST00000486311 SMIM10L2BP0DMW5 78 aa25.8■■□□□ 1.72
SREBF1-214ENST00000486311 POU3F3P20264 500 aaPredicted RBP25.8■■□□□ 1.72
SREBF1-214ENST00000486311 TMTC3Q6ZXV5 915 aa25.8■■□□□ 1.72
SREBF1-214ENST00000486311 FANCBQ8NB91 859 aa25.8■■□□□ 1.72
SREBF1-214ENST00000486311 TET1Q8NFU7 2136 aa25.8■■□□□ 1.72
SREBF1-214ENST00000486311 EFCAB14O75071 495 aa25.79■■□□□ 1.72
SREBF1-214ENST00000486311 DEFB103AP81534 67 aa25.79■■□□□ 1.72
SREBF1-214ENST00000486311 RNF20Q5VTR2 975 aa25.79■■□□□ 1.72
SREBF1-214ENST00000486311 NLRX1Q86UT6 975 aa25.79■■□□□ 1.72
SREBF1-214ENST00000486311 SKAP1Q86WV1 359 aa25.79■■□□□ 1.72
SREBF1-214ENST00000486311 RAB11FIP4Q86YS3 637 aa25.79■■□□□ 1.72
SREBF1-214ENST00000486311 ATP6V0A1Q93050 837 aa25.79■■□□□ 1.72
SREBF1-214ENST00000486311 CERS4Q9HA82 394 aa25.79■■□□□ 1.72
SREBF1-214ENST00000486311 RFXAPO00287 272 aa25.78■■□□□ 1.72
SREBF1-214ENST00000486311 THPOP40225 353 aa25.78■■□□□ 1.72
SREBF1-214ENST00000486311 IKBKEQ14164 716 aa25.78■■□□□ 1.72
SREBF1-214ENST00000486311 RNPEPQ9H4A4 650 aa25.78■■□□□ 1.72
SREBF1-214ENST00000486311 EMSYQ7Z589 1322 aa25.78■■□□□ 1.72
SREBF1-214ENST00000486311 hCG_1642624A0A1W2PR95 340 aa25.77■■□□□ 1.72
SREBF1-214ENST00000486311 EPOPA6NHQ4 379 aa25.77■■□□□ 1.72
SREBF1-214ENST00000486311 RSPH10B2B2RC85 870 aa25.77■■□□□ 1.72
SREBF1-214ENST00000486311 LGR5O75473 907 aa25.77■■□□□ 1.72
SREBF1-214ENST00000486311 RSPH10BP0C881 870 aa25.77■■□□□ 1.72
SREBF1-214ENST00000486311 TMCO2Q7Z6W1 182 aaPredicted RBP25.77■■□□□ 1.72
SREBF1-214ENST00000486311 MICU3Q86XE3 530 aa25.77■■□□□ 1.72
SREBF1-214ENST00000486311 GIMAP8Q8ND71 665 aaPredicted RBP25.77■■□□□ 1.72
SREBF1-214ENST00000486311 ARNTL2Q8WYA1 636 aa25.77■■□□□ 1.72
SREBF1-214ENST00000486311 GPRASP2Q96D09 838 aa25.77■■□□□ 1.72
SREBF1-214ENST00000486311 NEK1Q96PY6 1258 aa25.77■■□□□ 1.72
SREBF1-214ENST00000486311 TELO2Q9Y4R8 837 aa25.77■■□□□ 1.72
SREBF1-214ENST00000486311 MTCH2Q9Y6C9 303 aa25.77■■□□□ 1.72
SREBF1-214ENST00000486311 TREHO43280 583 aa25.76■■□□□ 1.71
SREBF1-214ENST00000486311 SYNE3Q6ZMZ3 975 aa25.76■■□□□ 1.71
SREBF1-214ENST00000486311 CCDC82Q8N4S0 544 aa25.76■■□□□ 1.71
SREBF1-214ENST00000486311 CDHR1Q96JP9 859 aa25.76■■□□□ 1.71
SREBF1-214ENST00000486311 ASB2Q96Q27 587 aa25.76■■□□□ 1.71
SREBF1-214ENST00000486311 ZBED2Q9BTP6 218 aa25.76■■□□□ 1.71
SREBF1-214ENST00000486311 ZNF215Q9UL58 517 aaPredicted RBP25.76■■□□□ 1.71
SREBF1-214ENST00000486311 TRANK1O15050 2925 aa25.76■■□□□ 1.71
SREBF1-214ENST00000486311 TRIP12Q14669 1992 aaPredicted RBP25.75■■□□□ 1.71
SREBF1-214ENST00000486311 LCHNA4D1U4 455 aa25.75■■□□□ 1.71
SREBF1-214ENST00000486311 GTPBP6O43824 516 aaPredicted RBP25.75■■□□□ 1.71
SREBF1-214ENST00000486311 CAND2O75155 1236 aa25.75■■□□□ 1.71
SREBF1-214ENST00000486311 GJB5O95377 273 aa25.75■■□□□ 1.71
SREBF1-214ENST00000486311 GNAT1P11488 350 aa25.75■■□□□ 1.71
SREBF1-214ENST00000486311 EXOSC10Q01780 885 aaKnown RBP25.75■■□□□ 1.71
SREBF1-214ENST00000486311 UBE2SQ16763 222 aa25.75■■□□□ 1.71
SREBF1-214ENST00000486311 TRIM50Q86XT4 487 aa25.75■■□□□ 1.71
SREBF1-214ENST00000486311 MICALL1Q8N3F8 863 aa25.75■■□□□ 1.71
SREBF1-214ENST00000486311 TSPYL2Q9H2G4 693 aaPredicted RBP25.75■■□□□ 1.71
SREBF1-214ENST00000486311 KCNA2P16389 499 aa25.74■■□□□ 1.71
SREBF1-214ENST00000486311 ITGB5P18084 799 aa25.74■■□□□ 1.71
SREBF1-214ENST00000486311 MRPS5P82675 430 aaKnown RBP25.74■■□□□ 1.71
SREBF1-214ENST00000486311 MKRN4PQ13434 485 aaPredicted RBP25.74■■□□□ 1.71
SREBF1-214ENST00000486311 TSGA10IPQ3SY00 556 aa25.74■■□□□ 1.71
SREBF1-214ENST00000486311 UTP14CQ5TAP6 766 aaKnown RBP25.74■■□□□ 1.71
SREBF1-214ENST00000486311 APOA5Q6Q788 366 aa25.74■■□□□ 1.71
SREBF1-214ENST00000486311 HEATR3Q7Z4Q2 680 aa25.74■■□□□ 1.71
SREBF1-214ENST00000486311 DBF4BQ8NFT6 615 aa25.74■■□□□ 1.71
SREBF1-214ENST00000486311 RAD9AQ99638 391 aa25.74■■□□□ 1.71
SREBF1-214ENST00000486311 SETD4Q9NVD3 440 aa25.74■■□□□ 1.71
SREBF1-214ENST00000486311 UBIAD1Q9Y5Z9 338 aa25.74■■□□□ 1.71
SREBF1-214ENST00000486311 MYH7BA7E2Y1 1941 aa25.74■■□□□ 1.71
SREBF1-214ENST00000486311 MUC3AQ02505 3323 aa25.74■■□□□ 1.71
SREBF1-214ENST00000486311 SPDYE3A6NKU9 549 aa25.73■■□□□ 1.71
SREBF1-214ENST00000486311 ATP9AO75110 1047 aa25.73■■□□□ 1.71
SREBF1-214ENST00000486311 SP4Q02446 784 aa25.73■■□□□ 1.71
SREBF1-214ENST00000486311 PLEKHG4Q58EX7 1191 aa25.73■■□□□ 1.71
SREBF1-214ENST00000486311 DHX32Q7L7V1 743 aaKnown RBP25.73■■□□□ 1.71
SREBF1-214ENST00000486311 RBM28Q9NW13 759 aaKnown RBP25.73■■□□□ 1.71
SREBF1-214ENST00000486311 PCDHA6Q9UN73 950 aa25.73■■□□□ 1.71
SREBF1-214ENST00000486311 PCDHA8Q9Y5H6 950 aa25.73■■□□□ 1.71
SREBF1-214ENST00000486311 RBAK-RBAKDNI3L0D1 243 aa25.72■■□□□ 1.71
SREBF1-214ENST00000486311 ADAM17P78536 824 aa25.72■■□□□ 1.71
SREBF1-214ENST00000486311 SPRED2Q7Z698 418 aa25.72■■□□□ 1.71
SREBF1-214ENST00000486311 RASEFQ8IZ41 740 aa25.72■■□□□ 1.71
SREBF1-214ENST00000486311 CNTNAP5Q8WYK1 1306 aa25.71■■□□□ 1.71
SREBF1-214ENST00000486311 CDC45O75419 566 aa25.71■■□□□ 1.71
SREBF1-214ENST00000486311 GRB10Q13322 594 aa25.71■■□□□ 1.71
SREBF1-214ENST00000486311 MTMR1Q13613 665 aa25.71■■□□□ 1.71
SREBF1-214ENST00000486311 WWC2Q6AWC2 1192 aa25.71■■□□□ 1.71
SREBF1-214ENST00000486311 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.71■■□□□ 1.71
SREBF1-214ENST00000486311 TEX2Q8IWB9 1127 aa25.71■■□□□ 1.71
SREBF1-214ENST00000486311 LMBR1Q8WVP7 490 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms