RNA–Protein interactions for RNA: ENST00000485962.5

SGSM3-213, Transcript of small G protein signaling modulator 3, human

TSL 5

Gene SGSM3, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGSM3-213	ENST00000485962	TDRD12	Q587J7	1177 aa	Known RBP	13.61	□□□□□ -0.23
SGSM3-213	ENST00000485962	CCNI2	Q6ZMN8	369 aa	Predicted RBP	13.61	□□□□□ -0.23
SGSM3-213	ENST00000485962	AMIGO3	Q86WK7	504 aa		13.61	□□□□□ -0.23
SGSM3-213	ENST00000485962	TSG101	Q99816	390 aa		13.61	□□□□□ -0.23
SGSM3-213	ENST00000485962	USP21	Q9UK80	565 aa		13.61	□□□□□ -0.23
SGSM3-213	ENST00000485962	KIF4A	O95239	1232 aa		13.61	□□□□□ -0.23
SGSM3-213	ENST00000485962	AARS	P49588	968 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
SGSM3-213	ENST00000485962	PICALM	Q13492	652 aa		13.61	□□□□□ -0.23
SGSM3-213	ENST00000485962	SKIDA1	Q1XH10	827 aa		13.61	□□□□□ -0.23
SGSM3-213	ENST00000485962	NFRKB	Q6P4R8	1299 aa		13.61	□□□□□ -0.23
SGSM3-213	ENST00000485962	PACS2	Q86VP3	889 aa		13.61	□□□□□ -0.23
SGSM3-213	ENST00000485962	MTMR9	Q96QG7	549 aa		13.61	□□□□□ -0.23
SGSM3-213	ENST00000485962	GPCPD1	Q9NPB8	672 aa		13.61	□□□□□ -0.23
SGSM3-213	ENST00000485962	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.61	□□□□□ -0.23
SGSM3-213	ENST00000485962	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.6	□□□□□ -0.23
SGSM3-213	ENST00000485962	PVALEF	A0A1B0GWK0	134 aa		13.6	□□□□□ -0.23
SGSM3-213	ENST00000485962	MFSD14B	Q5SR56	506 aa		13.6	□□□□□ -0.23
SGSM3-213	ENST00000485962	RC3H1	Q5TC82	1133 aa	Known RBP	13.6	□□□□□ -0.23
SGSM3-213	ENST00000485962	FOXR1	Q6PIV2	292 aa		13.6	□□□□□ -0.23
SGSM3-213	ENST00000485962	CREG2	Q8IUH2	290 aa		13.6	□□□□□ -0.23
SGSM3-213	ENST00000485962	GUF1	Q8N442	669 aa	Known RBP	13.6	□□□□□ -0.23
SGSM3-213	ENST00000485962	CCDC155	Q8N6L0	562 aa		13.6	□□□□□ -0.23
SGSM3-213	ENST00000485962	CNBD1	Q8NA66	436 aa		13.6	□□□□□ -0.23
SGSM3-213	ENST00000485962	DDX12P	Q92771	950 aa		13.6	□□□□□ -0.23
SGSM3-213	ENST00000485962	RPGR	Q92834	1020 aa	Known RBP	13.6	□□□□□ -0.23
SGSM3-213	ENST00000485962	NUDT12	Q9BQG2	462 aa		13.6	□□□□□ -0.23
SGSM3-213	ENST00000485962	CD209	Q9NNX6	404 aa		13.6	□□□□□ -0.23
SGSM3-213	ENST00000485962	NLRC4	Q9NPP4	1024 aa		13.6	□□□□□ -0.23
SGSM3-213	ENST00000485962	ETAA1	Q9NY74	926 aa		13.6	□□□□□ -0.23
SGSM3-213	ENST00000485962	RRP15	Q9Y3B9	282 aa	Known RBP	13.6	□□□□□ -0.23
SGSM3-213	ENST00000485962	DDX60L	Q5H9U9	1706 aa	Known RBP	13.6	□□□□□ -0.23
SGSM3-213	ENST00000485962	COL24A1	Q17RW2	1714 aa		13.6	□□□□□ -0.23
SGSM3-213	ENST00000485962	PDHB	P11177	359 aa		13.6	□□□□□ -0.23
SGSM3-213	ENST00000485962	PLCG2	P16885	1265 aa		13.6	□□□□□ -0.23
SGSM3-213	ENST00000485962	FXR2	P51116	673 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
SGSM3-213	ENST00000485962	GFPT1	Q06210	699 aa	Predicted RBP	13.6	□□□□□ -0.23
SGSM3-213	ENST00000485962	EZH2	Q15910	746 aa	Known RBP	13.6	□□□□□ -0.23
SGSM3-213	ENST00000485962	COBLL1	Q53SF7	1204 aa		13.6	□□□□□ -0.23
SGSM3-213	ENST00000485962	PHC3	Q8NDX5	983 aa		13.6	□□□□□ -0.23
SGSM3-213	ENST00000485962	GLIS3	Q8NEA6	775 aa		13.6	□□□□□ -0.23
SGSM3-213	ENST00000485962	RAD54L	Q92698	747 aa		13.6	□□□□□ -0.23
SGSM3-213	ENST00000485962	MKL1	Q969V6	931 aa		13.6	□□□□□ -0.23
SGSM3-213	ENST00000485962	OSBPL9	Q96SU4	736 aa		13.6	□□□□□ -0.23
SGSM3-213	ENST00000485962	LRRC1	Q9BTT6	524 aa		13.6	□□□□□ -0.23
SGSM3-213	ENST00000485962	SMARCAL1	Q9NZC9	954 aa		13.6	□□□□□ -0.23
SGSM3-213	ENST00000485962	SRCAP	Q6ZRS2	3230 aa		13.6	□□□□□ -0.23
SGSM3-213	ENST00000485962	GPR75-ASB3	A0A0A6YYF3	556 aa		13.59	□□□□□ -0.23
SGSM3-213	ENST00000485962	BUB1	O43683	1085 aa		13.59	□□□□□ -0.23
SGSM3-213	ENST00000485962	HNRNPH3	P31942	346 aa	Known RBP	13.59	□□□□□ -0.23
SGSM3-213	ENST00000485962	GPSM2	P81274	684 aa		13.59	□□□□□ -0.23
SGSM3-213	ENST00000485962	SLC7A5	Q01650	507 aa		13.59	□□□□□ -0.23
SGSM3-213	ENST00000485962	RASSF7	Q02833	373 aa		13.59	□□□□□ -0.23
SGSM3-213	ENST00000485962	LRRC63	Q05C16	580 aa		13.59	□□□□□ -0.23
SGSM3-213	ENST00000485962	ORC2	Q13416	577 aa	Predicted RBP	13.59	□□□□□ -0.23
SGSM3-213	ENST00000485962	CCDC40	Q4G0X9	1142 aa		13.59	□□□□□ -0.23
SGSM3-213	ENST00000485962	SND1	Q7KZF4	910 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
SGSM3-213	ENST00000485962	SRL	Q86TD4	932 aa		13.59	□□□□□ -0.23
SGSM3-213	ENST00000485962	HDAC7	Q8WUI4	952 aa		13.59	□□□□□ -0.23
SGSM3-213	ENST00000485962	UIMC1	Q96RL1	719 aa		13.59	□□□□□ -0.23
SGSM3-213	ENST00000485962	PLEKHA4	Q9H4M7	779 aa		13.59	□□□□□ -0.23
SGSM3-213	ENST00000485962	HYOU1	Q9Y4L1	999 aa		13.59	□□□□□ -0.23
SGSM3-213	ENST00000485962	NUB1	Q9Y5A7	615 aa		13.59	□□□□□ -0.23
SGSM3-213	ENST00000485962	ESYT2	A0FGR8	921 aa		13.59	□□□□□ -0.23
SGSM3-213	ENST00000485962	NCK2	O43639	380 aa		13.59	□□□□□ -0.23
SGSM3-213	ENST00000485962	DNA2	P51530	1060 aa		13.59	□□□□□ -0.23
SGSM3-213	ENST00000485962	CLEC10A	Q8IUN9	316 aa		13.59	□□□□□ -0.23
SGSM3-213	ENST00000485962	SPATA4	Q8NEY3	305 aa		13.59	□□□□□ -0.23
SGSM3-213	ENST00000485962	TATDN2	Q93075	761 aa		13.59	□□□□□ -0.23
SGSM3-213	ENST00000485962	GJA10	Q969M2	543 aa		13.59	□□□□□ -0.23
SGSM3-213	ENST00000485962	RANBP17	Q9H2T7	1088 aa	Known RBP	13.59	□□□□□ -0.23
SGSM3-213	ENST00000485962	EHD2	Q9NZN4	543 aa		13.59	□□□□□ -0.23
SGSM3-213	ENST00000485962	TBC1D7	Q9P0N9	293 aa		13.59	□□□□□ -0.23
SGSM3-213	ENST00000485962	TRAF5	O00463	557 aa		13.59	□□□□□ -0.23
SGSM3-213	ENST00000485962	NEBL	O76041	1014 aa		13.59	□□□□□ -0.23
SGSM3-213	ENST00000485962	PRPF6	O94906	941 aa	Known RBP	13.59	□□□□□ -0.23
SGSM3-213	ENST00000485962	TCP1	P17987	556 aa	Known RBP	13.59	□□□□□ -0.23
SGSM3-213	ENST00000485962	SMARCA1	P28370	1054 aa		13.59	□□□□□ -0.23
SGSM3-213	ENST00000485962	PAFAH1B1	P43034	410 aa		13.59	□□□□□ -0.23
SGSM3-213	ENST00000485962	UBE2S	Q16763	222 aa		13.59	□□□□□ -0.23
SGSM3-213	ENST00000485962	KCNK18	Q7Z418	384 aa		13.59	□□□□□ -0.23
SGSM3-213	ENST00000485962	RIOX1	Q9H6W3	641 aa		13.59	□□□□□ -0.23
SGSM3-213	ENST00000485962	FAM184B	Q9ULE4	1060 aa		13.59	□□□□□ -0.23
SGSM3-213	ENST00000485962	LRRC31	Q6UY01	552 aa		13.58	□□□□□ -0.24
SGSM3-213	ENST00000485962	MYOCD	Q8IZQ8	938 aa		13.58	□□□□□ -0.24
SGSM3-213	ENST00000485962	TBC1D22A	Q8WUA7	517 aa		13.58	□□□□□ -0.24
SGSM3-213	ENST00000485962	DMGDH	Q9UI17	866 aa	Known RBP	13.58	□□□□□ -0.24
SGSM3-213	ENST00000485962	CCDC15	Q0P6D6	951 aa		13.58	□□□□□ -0.24
SGSM3-213	ENST00000485962	MMGT1	Q8N4V1	131 aa		13.58	□□□□□ -0.24
SGSM3-213	ENST00000485962	LRRC27	Q9C0I9	530 aa		13.58	□□□□□ -0.24
SGSM3-213	ENST00000485962	CPSF2	Q9P2I0	782 aa	Known RBP	13.58	□□□□□ -0.24
SGSM3-213	ENST00000485962	RBM47	A0AV96	593 aa	Known RBP	13.57	□□□□□ -0.24
SGSM3-213	ENST00000485962	hCG_1984214	I3L0E3	225 aa		13.57	□□□□□ -0.24
SGSM3-213	ENST00000485962	ENOX2	Q16206	610 aa	Known RBP	13.57	□□□□□ -0.24
SGSM3-213	ENST00000485962	TTC31	Q49AM3	519 aa	Predicted RBP	13.57	□□□□□ -0.24
SGSM3-213	ENST00000485962	PDXDC1	Q6P996	788 aa		13.57	□□□□□ -0.24
SGSM3-213	ENST00000485962	LRRC55	Q6ZSA7	311 aa		13.57	□□□□□ -0.24
SGSM3-213	ENST00000485962	ZNF713	Q8N859	430 aa	Predicted RBP	13.57	□□□□□ -0.24
SGSM3-213	ENST00000485962	FAM76A	Q8TAV0	307 aa		13.57	□□□□□ -0.24
SGSM3-213	ENST00000485962	BAP1	Q92560	729 aa		13.57	□□□□□ -0.24
SGSM3-213	ENST00000485962	DDX25	Q9UHL0	483 aa	Known RBP	13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms