RNA–Protein interactions for RNA: ENST00000485780.1

SHROOM3-207, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-207ENST00000485780 GDF15Q99988 308 aa10.59□□□□□ -0.71
SHROOM3-207ENST00000485780 UBE2OQ9C0C9 1292 aaKnown RBP10.59□□□□□ -0.71
SHROOM3-207ENST00000485780 PRO3102Q9H379 93 aa10.59□□□□□ -0.71
SHROOM3-207ENST00000485780 PRDM5Q9NQX1 630 aaPredicted RBP10.59□□□□□ -0.71
SHROOM3-207ENST00000485780 KCNH7Q9NS40 1196 aa10.59□□□□□ -0.71
SHROOM3-207ENST00000485780 FOXD4L1Q9NU39 408 aa10.59□□□□□ -0.71
SHROOM3-207ENST00000485780 MTMR6Q9Y217 621 aa10.59□□□□□ -0.71
SHROOM3-207ENST00000485780 MRVI1Q9Y6F6 885 aa10.59□□□□□ -0.71
SHROOM3-207ENST00000485780 NFASCO94856 1347 aa10.58□□□□□ -0.71
SHROOM3-207ENST00000485780 CEP290O15078 2479 aa10.58□□□□□ -0.72
SHROOM3-207ENST00000485780 H3BQV1 296 aa10.58□□□□□ -0.72
SHROOM3-207ENST00000485780 WNT7AO00755 349 aa10.58□□□□□ -0.72
SHROOM3-207ENST00000485780 SLC37A4O43826 429 aa10.58□□□□□ -0.72
SHROOM3-207ENST00000485780 TDP2O95551 362 aa10.58□□□□□ -0.72
SHROOM3-207ENST00000485780 HSP90AA1P07900 732 aaKnown RBP10.58□□□□□ -0.72
SHROOM3-207ENST00000485780 C6orf222P0C671 652 aaPredicted RBP10.58□□□□□ -0.72
SHROOM3-207ENST00000485780 TXNP10599 105 aaKnown RBP10.58□□□□□ -0.72
SHROOM3-207ENST00000485780 BMP8BP34820 402 aa10.58□□□□□ -0.72
SHROOM3-207ENST00000485780 ANP32AP39687 249 aaKnown RBP10.58□□□□□ -0.72
SHROOM3-207ENST00000485780 GJA9P57773 515 aa10.58□□□□□ -0.72
SHROOM3-207ENST00000485780 MDM2Q00987 491 aaPredicted RBP10.58□□□□□ -0.72
SHROOM3-207ENST00000485780 SP2Q02086 613 aa10.58□□□□□ -0.72
SHROOM3-207ENST00000485780 ARHGAP1Q07960 439 aa10.58□□□□□ -0.72
SHROOM3-207ENST00000485780 RESTQ13127 1097 aa10.58□□□□□ -0.72
SHROOM3-207ENST00000485780 TMEM63BQ5T3F8 832 aa10.58□□□□□ -0.72
SHROOM3-207ENST00000485780 CCSAPQ6IQ19 270 aaPredicted RBP10.58□□□□□ -0.72
SHROOM3-207ENST00000485780 BRAPQ7Z569 592 aa10.58□□□□□ -0.72
SHROOM3-207ENST00000485780 TLK2Q86UE8 772 aa10.58□□□□□ -0.72
SHROOM3-207ENST00000485780 KLHDC9Q8NEP7 349 aa10.58□□□□□ -0.72
SHROOM3-207ENST00000485780 ETNPPLQ8TBG4 499 aa10.58□□□□□ -0.72
SHROOM3-207ENST00000485780 ZFP91Q96JP5 570 aaPredicted RBP10.58□□□□□ -0.72
SHROOM3-207ENST00000485780 TSEN34Q9BSV6 310 aaKnown RBP10.58□□□□□ -0.72
SHROOM3-207ENST00000485780 KCNMB3Q9NPA1 279 aa10.58□□□□□ -0.72
SHROOM3-207ENST00000485780 RTEL1Q9NZ71 1219 aa10.58□□□□□ -0.72
SHROOM3-207ENST00000485780 PHF24Q9UPV7 400 aa10.58□□□□□ -0.72
SHROOM3-207ENST00000485780 A0A1W2PQ45 241 aaPredicted RBP10.57□□□□□ -0.72
SHROOM3-207ENST00000485780 A0A1W2PQY0 241 aa10.57□□□□□ -0.72
SHROOM3-207ENST00000485780 MOXD2PA6NHM9 499 aa10.57□□□□□ -0.72
SHROOM3-207ENST00000485780 A6NJR5 290 aa10.57□□□□□ -0.72
SHROOM3-207ENST00000485780 TBX3O15119 743 aa10.57□□□□□ -0.72
SHROOM3-207ENST00000485780 DHX15O43143 795 aaKnown RBP10.57□□□□□ -0.72
SHROOM3-207ENST00000485780 ATP9AO75110 1047 aa10.57□□□□□ -0.72
SHROOM3-207ENST00000485780 GH1P01241 217 aa10.57□□□□□ -0.72
SHROOM3-207ENST00000485780 ARP10275 920 aa10.57□□□□□ -0.72
SHROOM3-207ENST00000485780 TOB1P50616 345 aaPredicted RBP10.57□□□□□ -0.72
SHROOM3-207ENST00000485780 ITGB3BPQ13352 177 aaPredicted RBP10.57□□□□□ -0.72
SHROOM3-207ENST00000485780 NEDD9Q14511 834 aa10.57□□□□□ -0.72
SHROOM3-207ENST00000485780 LY6KQ17RY6 165 aa10.57□□□□□ -0.72
SHROOM3-207ENST00000485780 LETM2Q2VYF4 491 aa10.57□□□□□ -0.72
SHROOM3-207ENST00000485780 TRIM60Q495X7 471 aa10.57□□□□□ -0.72
SHROOM3-207ENST00000485780 RILPL1Q5EBL4 403 aa10.57□□□□□ -0.72
SHROOM3-207ENST00000485780 CELF3Q5SZQ8 465 aaKnown RBP10.57□□□□□ -0.72
SHROOM3-207ENST00000485780 MYSM1Q5VVJ2 828 aa10.57□□□□□ -0.72
SHROOM3-207ENST00000485780 METTL7BQ6UX53 244 aa10.57□□□□□ -0.72
SHROOM3-207ENST00000485780 PLA2G4DQ86XP0 818 aa10.57□□□□□ -0.72
SHROOM3-207ENST00000485780 PCSK9Q8NBP7 692 aaKnown RBP10.57□□□□□ -0.72
SHROOM3-207ENST00000485780 GIMAP8Q8ND71 665 aaPredicted RBP10.57□□□□□ -0.72
SHROOM3-207ENST00000485780 PPTC7Q8NI37 304 aa10.57□□□□□ -0.72
SHROOM3-207ENST00000485780 SLC5A5Q92911 643 aa10.57□□□□□ -0.72
SHROOM3-207ENST00000485780 VTI1AQ96AJ9 217 aa10.57□□□□□ -0.72
SHROOM3-207ENST00000485780 AGO4Q9HCK5 861 aaKnown RBP10.57□□□□□ -0.72
SHROOM3-207ENST00000485780 STARD7Q9NQZ5 370 aa10.57□□□□□ -0.72
SHROOM3-207ENST00000485780 MYH9P35579 1960 aaKnown RBP10.57□□□□□ -0.72
SHROOM3-207ENST00000485780 VPS37CA5D8V6 355 aaPredicted RBP10.56□□□□□ -0.72
SHROOM3-207ENST00000485780 IPO5O00410 1097 aaKnown RBP10.56□□□□□ -0.72
SHROOM3-207ENST00000485780 MSH4O15457 936 aa10.56□□□□□ -0.72
SHROOM3-207ENST00000485780 BRD1O95696 1058 aa10.56□□□□□ -0.72
SHROOM3-207ENST00000485780 GGPS1O95749 300 aa10.56□□□□□ -0.72
SHROOM3-207ENST00000485780 PTGS1P23219 599 aa10.56□□□□□ -0.72
SHROOM3-207ENST00000485780 ZNF76P36508 570 aa10.56□□□□□ -0.72
SHROOM3-207ENST00000485780 ACLYP53396 1101 aa10.56□□□□□ -0.72
SHROOM3-207ENST00000485780 GNL2Q13823 731 aaKnown RBP10.56□□□□□ -0.72
SHROOM3-207ENST00000485780 KCNA10Q16322 511 aa10.56□□□□□ -0.72
SHROOM3-207ENST00000485780 PRR16Q569H4 304 aa10.56□□□□□ -0.72
SHROOM3-207ENST00000485780 B3GNT9Q6UX72 402 aa10.56□□□□□ -0.72
SHROOM3-207ENST00000485780 TDHQ8IZJ6 230 aa10.56□□□□□ -0.72
SHROOM3-207ENST00000485780 HAS1Q92839 578 aa10.56□□□□□ -0.72
SHROOM3-207ENST00000485780 COPS5Q92905 334 aa10.56□□□□□ -0.72
SHROOM3-207ENST00000485780 GLT1D1Q96MS3 346 aa10.56□□□□□ -0.72
SHROOM3-207ENST00000485780 RIT2Q99578 217 aa10.56□□□□□ -0.72
SHROOM3-207ENST00000485780 AP5M1Q9H0R1 490 aa10.56□□□□□ -0.72
SHROOM3-207ENST00000485780 ZSCAN16Q9H4T2 348 aaPredicted RBP10.56□□□□□ -0.72
SHROOM3-207ENST00000485780 DDX25Q9UHL0 483 aaKnown RBP10.56□□□□□ -0.72
SHROOM3-207ENST00000485780 NOL7Q9UMY1 257 aaKnown RBP10.56□□□□□ -0.72
SHROOM3-207ENST00000485780 RBM19Q9Y4C8 960 aaKnown RBP10.56□□□□□ -0.72
SHROOM3-207ENST00000485780 TCHHQ07283 1943 aa10.55□□□□□ -0.72
SHROOM3-207ENST00000485780 MYADML2A6NDP7 307 aa10.55□□□□□ -0.72
SHROOM3-207ENST00000485780 CCNT1O60563 726 aaKnown RBP10.55□□□□□ -0.72
SHROOM3-207ENST00000485780 PQBP1O60828 265 aaKnown RBP10.55□□□□□ -0.72
SHROOM3-207ENST00000485780 PSMD10O75832 226 aa10.55□□□□□ -0.72
SHROOM3-207ENST00000485780 MMP3P08254 477 aa10.55□□□□□ -0.72
SHROOM3-207ENST00000485780 ZSCAN22P10073 491 aaPredicted RBP10.55□□□□□ -0.72
SHROOM3-207ENST00000485780 TLE2Q04725 743 aa10.55□□□□□ -0.72
SHROOM3-207ENST00000485780 LAMC2Q13753 1193 aa10.55□□□□□ -0.72
SHROOM3-207ENST00000485780 PKP1Q13835 747 aa10.55□□□□□ -0.72
SHROOM3-207ENST00000485780 SNX17Q15036 470 aa10.55□□□□□ -0.72
SHROOM3-207ENST00000485780 FSCN1Q16658 493 aaKnown RBP10.55□□□□□ -0.72
SHROOM3-207ENST00000485780 GNASQ5JWF2 1037 aa10.55□□□□□ -0.72
SHROOM3-207ENST00000485780 TTC38Q5R3I4 469 aa10.55□□□□□ -0.72
SHROOM3-207ENST00000485780 C1orf53Q5VUE5 145 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms