RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, human

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2B-213	ENST00000485530	FOSL2	P15408	326 aa		13.91	□□□□□ -0.18
TRA2B-213	ENST00000485530	DDIT3	P35638	169 aa		13.91	□□□□□ -0.18
TRA2B-213	ENST00000485530	RTP1	P59025	263 aa		13.91	□□□□□ -0.18
TRA2B-213	ENST00000485530	SMAD3	P84022	425 aa	Known RBP	13.91	□□□□□ -0.18
TRA2B-213	ENST00000485530	BECN1	Q14457	450 aa		13.91	□□□□□ -0.18
TRA2B-213	ENST00000485530	NBR1	Q14596	966 aa		13.91	□□□□□ -0.18
TRA2B-213	ENST00000485530	SAFB	Q15424	915 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
TRA2B-213	ENST00000485530	DUSP28	Q4G0W2	176 aa		13.91	□□□□□ -0.18
TRA2B-213	ENST00000485530	MCTP1	Q6DN14	999 aa		13.91	□□□□□ -0.18
TRA2B-213	ENST00000485530	FERMT3	Q86UX7	667 aa		13.91	□□□□□ -0.18
TRA2B-213	ENST00000485530	SCFD2	Q8WU76	684 aa		13.91	□□□□□ -0.18
TRA2B-213	ENST00000485530	GJA10	Q969M2	543 aa		13.91	□□□□□ -0.18
TRA2B-213	ENST00000485530	MPHOSPH6	Q99547	160 aa	Known RBP	13.91	□□□□□ -0.18
TRA2B-213	ENST00000485530	PRKAG2	Q9UGJ0	569 aa		13.91	□□□□□ -0.18
TRA2B-213	ENST00000485530	LRRC37A2	A6NM11	1700 aa		13.9	□□□□□ -0.18
TRA2B-213	ENST00000485530	VPS37C	A5D8V6	355 aa	Predicted RBP	13.9	□□□□□ -0.18
TRA2B-213	ENST00000485530	DNM1L	O00429	736 aa		13.9	□□□□□ -0.18
TRA2B-213	ENST00000485530	DHX15	O43143	795 aa	Known RBP	13.9	□□□□□ -0.18
TRA2B-213	ENST00000485530	DYNC1LI2	O43237	492 aa	Predicted RBP	13.9	□□□□□ -0.18
TRA2B-213	ENST00000485530	SLC37A4	O43826	429 aa		13.9	□□□□□ -0.18
TRA2B-213	ENST00000485530	SORBS3	O60504	671 aa		13.9	□□□□□ -0.18
TRA2B-213	ENST00000485530	DUSP11	O75319	330 aa	Known RBP	13.9	□□□□□ -0.18
TRA2B-213	ENST00000485530	PGK1	P00558	417 aa		13.9	□□□□□ -0.18
TRA2B-213	ENST00000485530	AKR1A1	P14550	325 aa		13.9	□□□□□ -0.18
TRA2B-213	ENST00000485530	KCNA2	P16389	499 aa		13.9	□□□□□ -0.18
TRA2B-213	ENST00000485530	PDC	P20941	246 aa		13.9	□□□□□ -0.18
TRA2B-213	ENST00000485530	ZNF76	P36508	570 aa		13.9	□□□□□ -0.18
TRA2B-213	ENST00000485530	ARHGAP1	Q07960	439 aa		13.9	□□□□□ -0.18
TRA2B-213	ENST00000485530	REST	Q13127	1097 aa		13.9	□□□□□ -0.18
TRA2B-213	ENST00000485530	ITGB3BP	Q13352	177 aa	Predicted RBP	13.9	□□□□□ -0.18
TRA2B-213	ENST00000485530	LETM2	Q2VYF4	491 aa		13.9	□□□□□ -0.18
TRA2B-213	ENST00000485530	PRR16	Q569H4	304 aa		13.9	□□□□□ -0.18
TRA2B-213	ENST00000485530	FAM173B	Q6P4H8	233 aa		13.9	□□□□□ -0.18
TRA2B-213	ENST00000485530	NIPA1	Q7RTP0	329 aa		13.9	□□□□□ -0.18
TRA2B-213	ENST00000485530	NEK8	Q86SG6	692 aa		13.9	□□□□□ -0.18
TRA2B-213	ENST00000485530	PLA2G4D	Q86XP0	818 aa		13.9	□□□□□ -0.18
TRA2B-213	ENST00000485530	GPRASP2	Q96D09	838 aa		13.9	□□□□□ -0.18
TRA2B-213	ENST00000485530	EHMT1	Q9H9B1	1298 aa		13.9	□□□□□ -0.18
TRA2B-213	ENST00000485530	AGO4	Q9HCK5	861 aa	Known RBP	13.9	□□□□□ -0.18
TRA2B-213	ENST00000485530	BRMS1	Q9HCU9	246 aa		13.9	□□□□□ -0.18
TRA2B-213	ENST00000485530	MRVI1	Q9Y6F6	885 aa		13.9	□□□□□ -0.18
TRA2B-213	ENST00000485530	MSH4	O15457	936 aa		13.89	□□□□□ -0.19
TRA2B-213	ENST00000485530	FIBP	O43427	364 aa		13.89	□□□□□ -0.19
TRA2B-213	ENST00000485530	ADAMTS4	O75173	837 aa		13.89	□□□□□ -0.19
TRA2B-213	ENST00000485530	TGFB3	P10600	412 aa		13.89	□□□□□ -0.19
TRA2B-213	ENST00000485530	ATP2B1	P20020	1258 aa		13.89	□□□□□ -0.19
TRA2B-213	ENST00000485530	UBA1	P22314	1058 aa	Known RBP	13.89	□□□□□ -0.19
TRA2B-213	ENST00000485530	NKX3-2	P78367	333 aa		13.89	□□□□□ -0.19
TRA2B-213	ENST00000485530	MTMR1	Q13613	665 aa		13.89	□□□□□ -0.19
TRA2B-213	ENST00000485530	TTLL4	Q14679	1199 aa		13.89	□□□□□ -0.19
TRA2B-213	ENST00000485530		Q4G0T1	1027 aa		13.89	□□□□□ -0.19
TRA2B-213	ENST00000485530	CELF3	Q5SZQ8	465 aa	Known RBP	13.89	□□□□□ -0.19
TRA2B-213	ENST00000485530	MYSM1	Q5VVJ2	828 aa		13.89	□□□□□ -0.19
TRA2B-213	ENST00000485530	PPP4R3A	Q6IN85	833 aa		13.89	□□□□□ -0.19
TRA2B-213	ENST00000485530	CCSAP	Q6IQ19	270 aa	Predicted RBP	13.89	□□□□□ -0.19
TRA2B-213	ENST00000485530	C4orf32	Q8N8J7	132 aa		13.89	□□□□□ -0.19
TRA2B-213	ENST00000485530	HAS1	Q92839	578 aa		13.89	□□□□□ -0.19
TRA2B-213	ENST00000485530	UPF3A	Q9H1J1	476 aa	Known RBP	13.89	□□□□□ -0.19
TRA2B-213	ENST00000485530	PKD2L1	Q9P0L9	805 aa		13.89	□□□□□ -0.19
TRA2B-213	ENST00000485530	RAPGEFL1	Q9UHV5	662 aa		13.89	□□□□□ -0.19
TRA2B-213	ENST00000485530	ATP11B	Q9Y2G3	1177 aa		13.89	□□□□□ -0.19
TRA2B-213	ENST00000485530	MYH7B	A7E2Y1	1941 aa		13.88	□□□□□ -0.19
TRA2B-213	ENST00000485530	MAFG	O15525	162 aa		13.88	□□□□□ -0.19
TRA2B-213	ENST00000485530	CCNT1	O60563	726 aa	Known RBP	13.88	□□□□□ -0.19
TRA2B-213	ENST00000485530	MSC	O60682	206 aa		13.88	□□□□□ -0.19
TRA2B-213	ENST00000485530	GJA9	P57773	515 aa		13.88	□□□□□ -0.19
TRA2B-213	ENST00000485530	BEX3	Q00994	111 aa		13.88	□□□□□ -0.19
TRA2B-213	ENST00000485530	ZNF174	Q15697	407 aa		13.88	□□□□□ -0.19
TRA2B-213	ENST00000485530	TJAP1	Q5JTD0	557 aa		13.88	□□□□□ -0.19
TRA2B-213	ENST00000485530	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.88	□□□□□ -0.19
TRA2B-213	ENST00000485530	MOXD1	Q6UVY6	613 aa		13.88	□□□□□ -0.19
TRA2B-213	ENST00000485530	CYFIP1	Q7L576	1253 aa		13.88	□□□□□ -0.19
TRA2B-213	ENST00000485530	NLRX1	Q86UT6	975 aa		13.88	□□□□□ -0.19
TRA2B-213	ENST00000485530	USP38	Q8NB14	1042 aa		13.88	□□□□□ -0.19
TRA2B-213	ENST00000485530	KLHDC9	Q8NEP7	349 aa		13.88	□□□□□ -0.19
TRA2B-213	ENST00000485530	ETNPPL	Q8TBG4	499 aa		13.88	□□□□□ -0.19
TRA2B-213	ENST00000485530	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.88	□□□□□ -0.19
TRA2B-213	ENST00000485530	SENP7	Q9BQF6	1050 aa		13.88	□□□□□ -0.19
TRA2B-213	ENST00000485530	TMEM60	Q9H2L4	133 aa		13.88	□□□□□ -0.19
TRA2B-213	ENST00000485530		Q9Y3F1	56 aa		13.88	□□□□□ -0.19
TRA2B-213	ENST00000485530	PCDHB6	Q9Y5E3	794 aa		13.88	□□□□□ -0.19
TRA2B-213	ENST00000485530	SYNRG	Q9UMZ2	1314 aa		13.88	□□□□□ -0.19
TRA2B-213	ENST00000485530	TMEM265	A0A087WTH1	108 aa		13.87	□□□□□ -0.19
TRA2B-213	ENST00000485530	TNFRSF10A	O00220	468 aa		13.87	□□□□□ -0.19
TRA2B-213	ENST00000485530	GGPS1	O95749	300 aa		13.87	□□□□□ -0.19
TRA2B-213	ENST00000485530	RARB	P10826	455 aa		13.87	□□□□□ -0.19
TRA2B-213	ENST00000485530	LRRC41	Q15345	812 aa		13.87	□□□□□ -0.19
TRA2B-213	ENST00000485530	HSDL1	Q3SXM5	330 aa		13.87	□□□□□ -0.19
TRA2B-213	ENST00000485530	GNPTAB	Q3T906	1256 aa		13.87	□□□□□ -0.19
TRA2B-213	ENST00000485530	KCNV1	Q6PIU1	500 aa		13.87	□□□□□ -0.19
TRA2B-213	ENST00000485530	TLK2	Q86UE8	772 aa		13.87	□□□□□ -0.19
TRA2B-213	ENST00000485530	AFG1L	Q8WV93	481 aa		13.87	□□□□□ -0.19
TRA2B-213	ENST00000485530	SLC5A5	Q92911	643 aa		13.87	□□□□□ -0.19
TRA2B-213	ENST00000485530	BAD	Q92934	168 aa		13.87	□□□□□ -0.19
TRA2B-213	ENST00000485530	KCNMB3	Q9NPA1	279 aa		13.87	□□□□□ -0.19
TRA2B-213	ENST00000485530	XPNPEP3	Q9NQH7	507 aa		13.87	□□□□□ -0.19
TRA2B-213	ENST00000485530	PRDM5	Q9NQX1	630 aa	Predicted RBP	13.87	□□□□□ -0.19
TRA2B-213	ENST00000485530	DDX25	Q9UHL0	483 aa	Known RBP	13.87	□□□□□ -0.19
TRA2B-213	ENST00000485530		A6NJR5	290 aa		13.86	□□□□□ -0.19
TRA2B-213	ENST00000485530	IPO5	O00410	1097 aa	Known RBP	13.86	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms