RNA–Protein interactions for RNA: ENST00000484988.2

SGIP1-211, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-211ENST00000484988 RASA3Q14644 834 aa4.44□□□□□ -1.7
SGIP1-211ENST00000484988 LONRF2Q1L5Z9 754 aa4.44□□□□□ -1.7
SGIP1-211ENST00000484988 FAM209AQ5JX71 171 aa4.44□□□□□ -1.7
SGIP1-211ENST00000484988 DPH6Q7L8W6 267 aa4.44□□□□□ -1.7
SGIP1-211ENST00000484988 TRIM48Q8IWZ4 208 aa4.44□□□□□ -1.7
SGIP1-211ENST00000484988 UHMK1Q8TAS1 419 aaKnown RBP4.44□□□□□ -1.7
SGIP1-211ENST00000484988 CLEC4DQ8WXI8 215 aa4.44□□□□□ -1.7
SGIP1-211ENST00000484988 YIPF4Q9BSR8 244 aa4.44□□□□□ -1.7
SGIP1-211ENST00000484988 LNPKQ9C0E8 428 aa4.44□□□□□ -1.7
SGIP1-211ENST00000484988 PFDN2Q9UHV9 154 aa4.44□□□□□ -1.7
SGIP1-211ENST00000484988 TRBV23-1A0A0A0MS06 115 aa4.43□□□□□ -1.7
SGIP1-211ENST00000484988 FAM221BA6H8Z2 402 aa4.43□□□□□ -1.7
SGIP1-211ENST00000484988 CCDC85CA6NKD9 419 aa4.43□□□□□ -1.7
SGIP1-211ENST00000484988 SLC27A2O14975 620 aa4.43□□□□□ -1.7
SGIP1-211ENST00000484988 NKRFO15226 690 aaKnown RBP eCLIP4.43□□□□□ -1.7
SGIP1-211ENST00000484988 SOD2P04179 222 aa4.43□□□□□ -1.7
SGIP1-211ENST00000484988 C6orf222P0C671 652 aaPredicted RBP4.43□□□□□ -1.7
SGIP1-211ENST00000484988 COL6A2P12110 1019 aa4.43□□□□□ -1.7
SGIP1-211ENST00000484988 BUD31P41223 144 aaPredicted RBP4.43□□□□□ -1.7
SGIP1-211ENST00000484988 RTP5Q14D33 572 aa4.43□□□□□ -1.7
SGIP1-211ENST00000484988 SKOR2Q2VWA4 1001 aaPredicted RBP4.43□□□□□ -1.7
SGIP1-211ENST00000484988 FAM26FQ5R3K3 315 aa4.43□□□□□ -1.7
SGIP1-211ENST00000484988 PROSER1Q86XN7 944 aa4.43□□□□□ -1.7
SGIP1-211ENST00000484988 PTPRN2Q92932 1015 aa4.43□□□□□ -1.7
SGIP1-211ENST00000484988 EXOC2Q96KP1 924 aa4.43□□□□□ -1.7
SGIP1-211ENST00000484988 KRTAP17-1Q9BYP8 105 aa4.43□□□□□ -1.7
SGIP1-211ENST00000484988 KRTAP4-5Q9BYR2 181 aa4.43□□□□□ -1.7
SGIP1-211ENST00000484988 USP40Q9NVE5 1235 aa4.43□□□□□ -1.7
SGIP1-211ENST00000484988 TRAF6Q9Y4K3 522 aa4.43□□□□□ -1.7
SGIP1-211ENST00000484988 DUSP10Q9Y6W6 482 aa4.43□□□□□ -1.7
SGIP1-211ENST00000484988 FAM47E-STBD1D6RA91 191 aa4.42□□□□□ -1.7
SGIP1-211ENST00000484988 DDX3XO00571 662 aaKnown RBP eCLIP4.42□□□□□ -1.7
SGIP1-211ENST00000484988 AQP7O14520 342 aa4.42□□□□□ -1.7
SGIP1-211ENST00000484988 WNT9AO14904 365 aa4.42□□□□□ -1.7
SGIP1-211ENST00000484988 ZNF28P17035 718 aa4.42□□□□□ -1.7
SGIP1-211ENST00000484988 EPHA5P54756 1037 aa4.42□□□□□ -1.7
SGIP1-211ENST00000484988 GJA9P57773 515 aa4.42□□□□□ -1.7
SGIP1-211ENST00000484988 SUMO1P63165 101 aaKnown RBP4.42□□□□□ -1.7
SGIP1-211ENST00000484988 SPIRE1Q08AE8 756 aa4.42□□□□□ -1.7
SGIP1-211ENST00000484988 TUSC3Q13454 348 aa4.42□□□□□ -1.7
SGIP1-211ENST00000484988 RGL3Q3MIN7 710 aa4.42□□□□□ -1.7
SGIP1-211ENST00000484988 MAMDC2Q7Z304 686 aaPredicted RBP4.42□□□□□ -1.7
SGIP1-211ENST00000484988 RBM12BQ8IXT5 1001 aaKnown RBP4.42□□□□□ -1.7
SGIP1-211ENST00000484988 JMYQ8N9B5 988 aa4.42□□□□□ -1.7
SGIP1-211ENST00000484988 TXNDC5Q8NBS9 432 aaKnown RBP4.42□□□□□ -1.7
SGIP1-211ENST00000484988 KISS1RQ969F8 398 aaPredicted RBP4.42□□□□□ -1.7
SGIP1-211ENST00000484988 MKL1Q969V6 931 aa4.42□□□□□ -1.7
SGIP1-211ENST00000484988 DEPDC7Q96QD5 511 aa4.42□□□□□ -1.7
SGIP1-211ENST00000484988 TMEM209Q96SK2 561 aa4.42□□□□□ -1.7
SGIP1-211ENST00000484988 KCNJ15Q99712 375 aa4.42□□□□□ -1.7
SGIP1-211ENST00000484988 CDC6Q99741 560 aa4.42□□□□□ -1.7
SGIP1-211ENST00000484988 DHRS4Q9BTZ2 278 aa4.42□□□□□ -1.7
SGIP1-211ENST00000484988 IPPKQ9H8X2 491 aa4.42□□□□□ -1.7
SGIP1-211ENST00000484988 TELO2Q9Y4R8 837 aa4.42□□□□□ -1.7
SGIP1-211ENST00000484988 KDM2BQ8NHM5 1336 aa4.42□□□□□ -1.7
SGIP1-211ENST00000484988 TCRBV5S4A2TA0A5A2 114 aa4.41□□□□□ -1.7
SGIP1-211ENST00000484988 LTFP02788 710 aa4.41□□□□□ -1.7
SGIP1-211ENST00000484988 CELA3BP08861 270 aa4.41□□□□□ -1.7
SGIP1-211ENST00000484988 GNAT1P11488 350 aa4.41□□□□□ -1.7
SGIP1-211ENST00000484988 FAHP16930 419 aa4.41□□□□□ -1.7
SGIP1-211ENST00000484988 IL13P35225 146 aa4.41□□□□□ -1.7
SGIP1-211ENST00000484988 MLLT6P55198 1093 aaPredicted RBP4.41□□□□□ -1.7
SGIP1-211ENST00000484988 GRIN1Q05586 938 aa4.41□□□□□ -1.7
SGIP1-211ENST00000484988 ZC3H12BQ5HYM0 836 aaKnown RBP4.41□□□□□ -1.7
SGIP1-211ENST00000484988 UBXN11Q5T124 520 aa4.41□□□□□ -1.7
SGIP1-211ENST00000484988 SOGA3Q5TF21 947 aa4.41□□□□□ -1.7
SGIP1-211ENST00000484988 MCTP2Q6DN12 878 aa4.41□□□□□ -1.7
SGIP1-211ENST00000484988 FERMT3Q86UX7 667 aa4.41□□□□□ -1.7
SGIP1-211ENST00000484988 SH3RF2Q8TEC5 729 aa4.41□□□□□ -1.7
SGIP1-211ENST00000484988 DDX1Q92499 740 aaKnown RBP4.41□□□□□ -1.7
SGIP1-211ENST00000484988 CLIC6Q96NY7 704 aa4.41□□□□□ -1.7
SGIP1-211ENST00000484988 ALG1Q9BT22 464 aa4.41□□□□□ -1.7
SGIP1-211ENST00000484988 SNTG2Q9NY99 539 aa4.41□□□□□ -1.7
SGIP1-211ENST00000484988 RBPJLQ9UBG7 517 aa4.41□□□□□ -1.7
SGIP1-211ENST00000484988 DSEQ9UL01 958 aa4.41□□□□□ -1.7
SGIP1-211ENST00000484988 NUB1Q9Y5A7 615 aa4.41□□□□□ -1.7
SGIP1-211ENST00000484988 MROH6A6NGR9 719 aa4.4□□□□□ -1.71
SGIP1-211ENST00000484988 C9orf118A6NHY6 69 aa4.4□□□□□ -1.71
SGIP1-211ENST00000484988 ARVCFO00192 962 aa4.4□□□□□ -1.71
SGIP1-211ENST00000484988 CNR2P34972 360 aa4.4□□□□□ -1.71
SGIP1-211ENST00000484988 GABREP78334 506 aa4.4□□□□□ -1.71
SGIP1-211ENST00000484988 KIAA2012Q0VF49 1180 aa4.4□□□□□ -1.71
SGIP1-211ENST00000484988 PAK1Q13153 545 aa4.4□□□□□ -1.71
SGIP1-211ENST00000484988 SF3A1Q15459 793 aaKnown RBP4.4□□□□□ -1.71
SGIP1-211ENST00000484988 PAN2Q504Q3 1202 aaKnown RBP4.4□□□□□ -1.71
SGIP1-211ENST00000484988 ERICH6BQ5W0A0 696 aa4.4□□□□□ -1.71
SGIP1-211ENST00000484988 TMC5Q6UXY8 1006 aa4.4□□□□□ -1.71
SGIP1-211ENST00000484988 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.4□□□□□ -1.71
SGIP1-211ENST00000484988 NPM2Q86SE8 214 aaKnown RBP4.4□□□□□ -1.71
SGIP1-211ENST00000484988 DTX3Q8N9I9 347 aa4.4□□□□□ -1.71
SGIP1-211ENST00000484988 PCDH19Q8TAB3 1148 aa4.4□□□□□ -1.71
SGIP1-211ENST00000484988 ZSWIM3Q96MP5 696 aa4.4□□□□□ -1.71
SGIP1-211ENST00000484988 YTHDC1Q96MU7 727 aaKnown RBP4.4□□□□□ -1.71
SGIP1-211ENST00000484988 IPO9Q96P70 1041 aaKnown RBP4.4□□□□□ -1.71
SGIP1-211ENST00000484988 DNAJC7Q99615 494 aa4.4□□□□□ -1.71
SGIP1-211ENST00000484988 KRTAP9-3Q9BYQ3 159 aa4.4□□□□□ -1.71
SGIP1-211ENST00000484988 CNOT11Q9UKZ1 510 aaKnown RBP4.4□□□□□ -1.71
SGIP1-211ENST00000484988 MRPS23Q9Y3D9 190 aaKnown RBP4.4□□□□□ -1.71
SGIP1-211ENST00000484988 PCDHA8Q9Y5H6 950 aa4.4□□□□□ -1.71
SGIP1-211ENST00000484988 ACOT7O00154 380 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms