RNA–Protein interactions for RNA: ENST00000484874.2

CNKSR1-208, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 3

Gene CNKSR1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-208ENST00000484874 DNAH12Q6ZR08 3092 aa20.58■□□□□ 0.89
CNKSR1-208ENST00000484874 A0A0U1RQG5 324 aaPredicted RBP20.58■□□□□ 0.89
CNKSR1-208ENST00000484874 CCDC194A0A1B0GVG4 234 aa20.58■□□□□ 0.89
CNKSR1-208ENST00000484874 ARVCFO00192 962 aa20.58■□□□□ 0.89
CNKSR1-208ENST00000484874 MYL3P08590 195 aa20.58■□□□□ 0.89
CNKSR1-208ENST00000484874 ATN1P54259 1190 aaPredicted RBP20.58■□□□□ 0.89
CNKSR1-208ENST00000484874 SETQ01105 290 aaPredicted RBP20.58■□□□□ 0.89
CNKSR1-208ENST00000484874 ANKRD33Q7Z3H0 272 aa20.58■□□□□ 0.89
CNKSR1-208ENST00000484874 PLA2G4DQ86XP0 818 aa20.58■□□□□ 0.89
CNKSR1-208ENST00000484874 OXER1Q8TDS5 423 aa20.58■□□□□ 0.89
CNKSR1-208ENST00000484874 TNFRSF25Q93038 417 aa20.58■□□□□ 0.89
CNKSR1-208ENST00000484874 AGO4Q9HCK5 861 aaKnown RBP20.58■□□□□ 0.89
CNKSR1-208ENST00000484874 RTP1P59025 263 aa20.57■□□□□ 0.88
CNKSR1-208ENST00000484874 ITGA7Q13683 1181 aa20.57■□□□□ 0.88
CNKSR1-208ENST00000484874 SAFBQ15424 915 aaKnown RBP eCLIP20.57■□□□□ 0.88
CNKSR1-208ENST00000484874 MBOAT7Q96N66 472 aa20.57■□□□□ 0.88
CNKSR1-208ENST00000484874 GRIN2DO15399 1336 aa20.56■□□□□ 0.88
CNKSR1-208ENST00000484874 BTBD18B2RXH4 712 aa20.56■□□□□ 0.88
CNKSR1-208ENST00000484874 Q4G0T1 1027 aa20.56■□□□□ 0.88
CNKSR1-208ENST00000484874 DIS3L2Q8IYB7 885 aaKnown RBP20.56■□□□□ 0.88
CNKSR1-208ENST00000484874 GPR20Q99678 358 aa20.56■□□□□ 0.88
CNKSR1-208ENST00000484874 NAP1L4Q99733 375 aaKnown RBP20.56■□□□□ 0.88
CNKSR1-208ENST00000484874 TBC1D22BQ9NU19 505 aa20.56■□□□□ 0.88
CNKSR1-208ENST00000484874 PDE4DIPQ5VU43 2346 aa20.56■□□□□ 0.88
CNKSR1-208ENST00000484874 MROH7Q68CQ1 1323 aa20.55■□□□□ 0.88
CNKSR1-208ENST00000484874 NOP56O00567 594 aaKnown RBP20.55■□□□□ 0.88
CNKSR1-208ENST00000484874 NR5A1Q13285 461 aa20.55■□□□□ 0.88
CNKSR1-208ENST00000484874 INF2Q27J81 1249 aa20.55■□□□□ 0.88
CNKSR1-208ENST00000484874 PRR16Q569H4 304 aa20.55■□□□□ 0.88
CNKSR1-208ENST00000484874 PPP4R3AQ6IN85 833 aa20.55■□□□□ 0.88
CNKSR1-208ENST00000484874 SEPT1Q8WYJ6 367 aa20.55■□□□□ 0.88
CNKSR1-208ENST00000484874 KAT2BQ92831 832 aa20.55■□□□□ 0.88
CNKSR1-208ENST00000484874 LENG9Q96B70 501 aa20.55■□□□□ 0.88
CNKSR1-208ENST00000484874 SDF4Q9BRK5 362 aa20.55■□□□□ 0.88
CNKSR1-208ENST00000484874 FOXP1Q9H334 677 aaPredicted RBP20.55■□□□□ 0.88
CNKSR1-208ENST00000484874 SMC3Q9UQE7 1217 aa20.55■□□□□ 0.88
CNKSR1-208ENST00000484874 IPO5O00410 1097 aaKnown RBP20.54■□□□□ 0.88
CNKSR1-208ENST00000484874 DHX15O43143 795 aaKnown RBP20.54■□□□□ 0.88
CNKSR1-208ENST00000484874 GCFC2P16383 781 aaKnown RBP20.54■□□□□ 0.88
CNKSR1-208ENST00000484874 TLE2Q04725 743 aa20.54■□□□□ 0.88
CNKSR1-208ENST00000484874 PTPN11Q06124 597 aaPredicted RBP20.54■□□□□ 0.88
CNKSR1-208ENST00000484874 TRIM60Q495X7 471 aa20.54■□□□□ 0.88
CNKSR1-208ENST00000484874 NFRKBQ6P4R8 1299 aa20.54■□□□□ 0.88
CNKSR1-208ENST00000484874 PIK3AP1Q6ZUJ8 805 aa20.54■□□□□ 0.88
CNKSR1-208ENST00000484874 NEK8Q86SG6 692 aa20.54■□□□□ 0.88
CNKSR1-208ENST00000484874 INTS4Q96HW7 963 aaKnown RBP20.54■□□□□ 0.88
CNKSR1-208ENST00000484874 C16orf70Q9BSU1 422 aa20.54■□□□□ 0.88
CNKSR1-208ENST00000484874 KATNAL1Q9BW62 490 aa20.54■□□□□ 0.88
CNKSR1-208ENST00000484874 SLC9A2Q9UBY0 812 aa20.54■□□□□ 0.88
CNKSR1-208ENST00000484874 GSTTP1A0A1W2PQM5 241 aa20.53■□□□□ 0.88
CNKSR1-208ENST00000484874 DCDC2CA8MYV0 355 aa20.53■□□□□ 0.88
CNKSR1-208ENST00000484874 K7ELQ4 463 aaPredicted RBP20.53■□□□□ 0.88
CNKSR1-208ENST00000484874 HAS3O00219 553 aa20.53■□□□□ 0.88
CNKSR1-208ENST00000484874 ATG7O95352 703 aa20.53■□□□□ 0.88
CNKSR1-208ENST00000484874 F2P00734 622 aa20.53■□□□□ 0.88
CNKSR1-208ENST00000484874 GJB2P29033 226 aa20.53■□□□□ 0.88
CNKSR1-208ENST00000484874 ITGB3BPQ13352 177 aaPredicted RBP20.53■□□□□ 0.88
CNKSR1-208ENST00000484874 NBPF20Q3BBV1 942 aa20.53■□□□□ 0.88
CNKSR1-208ENST00000484874 EARS2Q5JPH6 523 aaKnown RBP20.53■□□□□ 0.88
CNKSR1-208ENST00000484874 ZNF577Q9BSK1 485 aa20.53■□□□□ 0.88
CNKSR1-208ENST00000484874 JPH1Q9HDC5 661 aaPredicted RBP20.53■□□□□ 0.88
CNKSR1-208ENST00000484874 ATP11BQ9Y2G3 1177 aa20.53■□□□□ 0.88
CNKSR1-208ENST00000484874 SCN10AQ9Y5Y9 1956 aa20.53■□□□□ 0.88
CNKSR1-208ENST00000484874 SORBS3O60504 671 aa20.52■□□□□ 0.88
CNKSR1-208ENST00000484874 PSMC6P62333 389 aa20.52■□□□□ 0.88
CNKSR1-208ENST00000484874 GUCY1B3Q02153 619 aa20.52■□□□□ 0.88
CNKSR1-208ENST00000484874 SESTD1Q86VW0 696 aa20.52■□□□□ 0.88
CNKSR1-208ENST00000484874 RIT2Q99578 217 aa20.52■□□□□ 0.88
CNKSR1-208ENST00000484874 ALPK3Q96L96 1907 aa20.52■□□□□ 0.88
CNKSR1-208ENST00000484874 H3BRB1 525 aa20.51■□□□□ 0.87
CNKSR1-208ENST00000484874 MSH4O15457 936 aa20.51■□□□□ 0.87
CNKSR1-208ENST00000484874 CD4P01730 458 aa20.51■□□□□ 0.87
CNKSR1-208ENST00000484874 LGALS2P05162 132 aa20.51■□□□□ 0.87
CNKSR1-208ENST00000484874 U2AF2P26368 475 aaKnown RBP eCLIP20.51■□□□□ 0.87
CNKSR1-208ENST00000484874 PSEN2P49810 448 aa20.51■□□□□ 0.87
CNKSR1-208ENST00000484874 FOSBP53539 338 aa20.51■□□□□ 0.87
CNKSR1-208ENST00000484874 FAAP100Q0VG06 881 aa20.51■□□□□ 0.87
CNKSR1-208ENST00000484874 LETM2Q2VYF4 491 aa20.51■□□□□ 0.87
CNKSR1-208ENST00000484874 FAM126BQ8IXS8 530 aa20.51■□□□□ 0.87
CNKSR1-208ENST00000484874 C7orf61Q8IZ16 206 aa20.51■□□□□ 0.87
CNKSR1-208ENST00000484874 SLC5A5Q92911 643 aa20.51■□□□□ 0.87
CNKSR1-208ENST00000484874 TUT1Q9H6E5 874 aaKnown RBP20.51■□□□□ 0.87
CNKSR1-208ENST00000484874 PKD2L1Q9P0L9 805 aa20.51■□□□□ 0.87
CNKSR1-208ENST00000484874 TBX3O15119 743 aa20.5■□□□□ 0.87
CNKSR1-208ENST00000484874 TLR3O15455 904 aaKnown RBP20.5■□□□□ 0.87
CNKSR1-208ENST00000484874 LGR5O75473 907 aa20.5■□□□□ 0.87
CNKSR1-208ENST00000484874 TDP2O95551 362 aa20.5■□□□□ 0.87
CNKSR1-208ENST00000484874 TCF7P36402 384 aaPredicted RBP20.5■□□□□ 0.87
CNKSR1-208ENST00000484874 ACTR2P61160 394 aa20.5■□□□□ 0.87
CNKSR1-208ENST00000484874 ZNF746Q6NUN9 644 aaPredicted RBP20.5■□□□□ 0.87
CNKSR1-208ENST00000484874 FAM20AQ96MK3 541 aa20.5■□□□□ 0.87
CNKSR1-208ENST00000484874 DDX25Q9UHL0 483 aaKnown RBP20.5■□□□□ 0.87
CNKSR1-208ENST00000484874 TELO2Q9Y4R8 837 aa20.5■□□□□ 0.87
CNKSR1-208ENST00000484874 IGKV6D-21A0A0A0MT36 114 aa20.49■□□□□ 0.87
CNKSR1-208ENST00000484874 PQBP1O60828 265 aaKnown RBP20.49■□□□□ 0.87
CNKSR1-208ENST00000484874 CLTBP09497 229 aa20.49■□□□□ 0.87
CNKSR1-208ENST00000484874 SUPT20HL2P0C7V6 817 aa20.49■□□□□ 0.87
CNKSR1-208ENST00000484874 KRT76Q01546 638 aa20.49■□□□□ 0.87
CNKSR1-208ENST00000484874 MFSD10Q14728 455 aa20.49■□□□□ 0.87
CNKSR1-208ENST00000484874 KIAA0753Q2KHM9 967 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms