RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 APTXQ7Z2E3 356 aaKnown RBP18.64■□□□□ 0.57
CTSA-207ENST00000484855 CNKSR2Q8WXI2 1034 aa18.64■□□□□ 0.57
CTSA-207ENST00000484855 TRIM47Q96LD4 638 aa18.64■□□□□ 0.57
CTSA-207ENST00000484855 TAAR1Q96RJ0 339 aa18.64■□□□□ 0.57
CTSA-207ENST00000484855 TEKT3Q9BXF9 490 aa18.64■□□□□ 0.57
CTSA-207ENST00000484855 WDR11Q9BZH6 1224 aa18.64■□□□□ 0.57
CTSA-207ENST00000484855 DNM3Q9UQ16 869 aa18.64■□□□□ 0.57
CTSA-207ENST00000484855 A0A0G2JMZ2 1700 aa18.64■□□□□ 0.57
CTSA-207ENST00000484855 BICDL2A1A5D9 508 aa18.64■□□□□ 0.57
CTSA-207ENST00000484855 SPDYE16A6NNV3 312 aaPredicted RBP18.64■□□□□ 0.57
CTSA-207ENST00000484855 BCRP11274 1271 aa18.64■□□□□ 0.57
CTSA-207ENST00000484855 ITGB5P18084 799 aa18.64■□□□□ 0.57
CTSA-207ENST00000484855 EIF2AK2P19525 551 aaKnown RBP18.64■□□□□ 0.57
CTSA-207ENST00000484855 CCNE1P24864 410 aa18.64■□□□□ 0.57
CTSA-207ENST00000484855 SLC12A3P55017 1021 aa18.64■□□□□ 0.57
CTSA-207ENST00000484855 TMEM132BQ14DG7 1078 aa18.64■□□□□ 0.57
CTSA-207ENST00000484855 NIPA1Q7RTP0 329 aa18.64■□□□□ 0.57
CTSA-207ENST00000484855 C17orf53Q8N3J3 647 aaPredicted RBP18.64■□□□□ 0.57
CTSA-207ENST00000484855 ANKRD20A12PQ8NF67 263 aa18.64■□□□□ 0.57
CTSA-207ENST00000484855 P2RX5Q93086 422 aa18.64■□□□□ 0.57
CTSA-207ENST00000484855 ELP3Q9H9T3 547 aa18.64■□□□□ 0.57
CTSA-207ENST00000484855 HOXC10Q9NYD6 342 aa18.64■□□□□ 0.57
CTSA-207ENST00000484855 IPO5O00410 1097 aaKnown RBP18.63■□□□□ 0.57
CTSA-207ENST00000484855 HOXA7P31268 230 aaPredicted RBP18.63■□□□□ 0.57
CTSA-207ENST00000484855 EHHADHQ08426 723 aa18.63■□□□□ 0.57
CTSA-207ENST00000484855 COASYQ13057 564 aa18.63■□□□□ 0.57
CTSA-207ENST00000484855 PSMD2Q13200 908 aa18.63■□□□□ 0.57
CTSA-207ENST00000484855 NR1I3Q14994 352 aa18.63■□□□□ 0.57
CTSA-207ENST00000484855 PTPN21Q16825 1174 aa18.63■□□□□ 0.57
CTSA-207ENST00000484855 FILIP1LQ4L180 1135 aa18.63■□□□□ 0.57
CTSA-207ENST00000484855 TTI2Q6NXR4 508 aa18.63■□□□□ 0.57
CTSA-207ENST00000484855 TEX13BQ9BXU2 312 aa18.63■□□□□ 0.57
CTSA-207ENST00000484855 KCNJ18B7U540 433 aa18.62■□□□□ 0.57
CTSA-207ENST00000484855 ATP2A1O14983 1001 aa18.62■□□□□ 0.57
CTSA-207ENST00000484855 CYP11B2P19099 503 aa18.62■□□□□ 0.57
CTSA-207ENST00000484855 SFPQP23246 707 aaKnown RBP eCLIP18.62■□□□□ 0.57
CTSA-207ENST00000484855 PSMC6P62333 389 aa18.62■□□□□ 0.57
CTSA-207ENST00000484855 TTLL12Q14166 644 aaPredicted RBP18.62■□□□□ 0.57
CTSA-207ENST00000484855 KCNJ12Q14500 433 aa18.62■□□□□ 0.57
CTSA-207ENST00000484855 PGM5Q15124 567 aa18.62■□□□□ 0.57
CTSA-207ENST00000484855 RMDN3Q96TC7 470 aa18.62■□□□□ 0.57
CTSA-207ENST00000484855 TUFT1Q9NNX1 390 aa18.62■□□□□ 0.57
CTSA-207ENST00000484855 PXMP2Q9NR77 195 aa18.62■□□□□ 0.57
CTSA-207ENST00000484855 PANK4Q9NVE7 773 aa18.62■□□□□ 0.57
CTSA-207ENST00000484855 RGL1Q9NZL6 768 aa18.62■□□□□ 0.57
CTSA-207ENST00000484855 ADD3Q9UEY8 706 aaKnown RBP18.62■□□□□ 0.57
CTSA-207ENST00000484855 LIMA1Q9UHB6 759 aaKnown RBP18.62■□□□□ 0.57
CTSA-207ENST00000484855 KRT18P05783 430 aaKnown RBP18.62■□□□□ 0.57
CTSA-207ENST00000484855 PABPC4Q13310 644 aaKnown RBP eCLIP18.62■□□□□ 0.572e-8■■□□□ 11.5
CTSA-207ENST00000484855 BAATQ14032 418 aaPredicted RBP18.62■□□□□ 0.57
CTSA-207ENST00000484855 NOLC1Q14978 699 aaKnown RBP eCLIP18.62■□□□□ 0.57
CTSA-207ENST00000484855 KRT31Q15323 416 aa18.62■□□□□ 0.57
CTSA-207ENST00000484855 TKFCQ3LXA3 575 aa18.62■□□□□ 0.57
CTSA-207ENST00000484855 EAPPQ56P03 285 aaPredicted RBP18.62■□□□□ 0.57
CTSA-207ENST00000484855 TCP11X2Q5H9J9 407 aa18.62■□□□□ 0.57
CTSA-207ENST00000484855 TREML2Q5T2D2 321 aa18.62■□□□□ 0.57
CTSA-207ENST00000484855 ARMCX5Q6P1M9 558 aa18.62■□□□□ 0.57
CTSA-207ENST00000484855 CCDC65Q8IXS2 484 aa18.62■□□□□ 0.57
CTSA-207ENST00000484855 ANKRD13AQ8IZ07 590 aa18.62■□□□□ 0.57
CTSA-207ENST00000484855 RIT2Q99578 217 aa18.62■□□□□ 0.57
CTSA-207ENST00000484855 UNC45AQ9H3U1 944 aa18.62■□□□□ 0.57
CTSA-207ENST00000484855 KCNH7Q9NS40 1196 aa18.62■□□□□ 0.57
CTSA-207ENST00000484855 UBIAD1Q9Y5Z9 338 aa18.62■□□□□ 0.57
CTSA-207ENST00000484855 LCTP09848 1927 aa18.61■□□□□ 0.57
CTSA-207ENST00000484855 KIAA1217Q5T5P2 1943 aa18.61■□□□□ 0.57
CTSA-207ENST00000484855 MRPS9P82933 396 aaKnown RBP18.61■□□□□ 0.57
CTSA-207ENST00000484855 PPATQ06203 517 aa18.61■□□□□ 0.57
CTSA-207ENST00000484855 PLS1Q14651 629 aa18.61■□□□□ 0.57
CTSA-207ENST00000484855 ARHGEF16Q5VV41 709 aa18.61■□□□□ 0.57
CTSA-207ENST00000484855 SPECC1LQ69YQ0 1117 aa18.61■□□□□ 0.57
CTSA-207ENST00000484855 KCTD17Q8N5Z5 321 aa18.61■□□□□ 0.57
CTSA-207ENST00000484855 SYT2Q8N9I0 419 aaPredicted RBP18.61■□□□□ 0.57
CTSA-207ENST00000484855 NOC3LQ8WTT2 800 aaKnown RBP18.61■□□□□ 0.57
CTSA-207ENST00000484855 OTUD5Q96G74 571 aa18.61■□□□□ 0.57
CTSA-207ENST00000484855 DYDC2Q96IM9 177 aa18.61■□□□□ 0.57
CTSA-207ENST00000484855 THAP9Q9H5L6 903 aa18.61■□□□□ 0.57
CTSA-207ENST00000484855 JADE2Q9NQC1 790 aa18.61■□□□□ 0.57
CTSA-207ENST00000484855 NPHP3-ACAD11A0A0J9YXS1 232 aa18.61■□□□□ 0.57
CTSA-207ENST00000484855 IQCA1LA6NCM1 817 aa18.61■□□□□ 0.57
CTSA-207ENST00000484855 MYCLP12524 364 aaPredicted RBP18.61■□□□□ 0.57
CTSA-207ENST00000484855 CCZ1BP86790 482 aa18.61■□□□□ 0.57
CTSA-207ENST00000484855 CCZ1P86791 482 aaPredicted RBP18.61■□□□□ 0.57
CTSA-207ENST00000484855 CTTNQ14247 550 aaKnown RBP18.61■□□□□ 0.57
CTSA-207ENST00000484855 GADL1Q6ZQY3 521 aa18.61■□□□□ 0.57
CTSA-207ENST00000484855 MOB2Q70IA6 237 aa18.61■□□□□ 0.57
CTSA-207ENST00000484855 ILDR2Q71H61 639 aa18.61■□□□□ 0.57
CTSA-207ENST00000484855 ERO1BQ86YB8 467 aa18.61■□□□□ 0.57
CTSA-207ENST00000484855 CREBRFQ8IUR6 639 aa18.61■□□□□ 0.57
CTSA-207ENST00000484855 CLMNQ96JQ2 1002 aa18.61■□□□□ 0.57
CTSA-207ENST00000484855 HSD17B14Q9BPX1 270 aa18.61■□□□□ 0.57
CTSA-207ENST00000484855 PDCD2LQ9BRP1 358 aa18.61■□□□□ 0.57
CTSA-207ENST00000484855 SRRTQ9BXP5 876 aaKnown RBP18.61■□□□□ 0.57
CTSA-207ENST00000484855 TAF1DQ9H5J8 278 aaPredicted RBP18.61■□□□□ 0.57
CTSA-207ENST00000484855 ACAD9Q9H845 621 aa18.61■□□□□ 0.57
CTSA-207ENST00000484855 PKD2L1Q9P0L9 805 aa18.61■□□□□ 0.57
CTSA-207ENST00000484855 TEX33O43247 280 aa18.6■□□□□ 0.57
CTSA-207ENST00000484855 GRIN3BO60391 1043 aa18.6■□□□□ 0.57
CTSA-207ENST00000484855 SKILP12757 684 aa18.6■□□□□ 0.57
CTSA-207ENST00000484855 CACNB1Q02641 598 aaPredicted RBP18.6■□□□□ 0.57
CTSA-207ENST00000484855 MTMR1Q13613 665 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms