RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 RIT2Q99578 217 aa7.28□□□□□ -1.24
NCL-209ENST00000484328 UPF3AQ9H1J1 476 aaKnown RBP7.28□□□□□ -1.24
NCL-209ENST00000484328 TMEM60Q9H2L4 133 aa7.28□□□□□ -1.24
NCL-209ENST00000484328 PAK6Q9NQU5 681 aaPredicted RBP7.28□□□□□ -1.24
NCL-209ENST00000484328 RTEL1Q9NZ71 1219 aa7.28□□□□□ -1.24
NCL-209ENST00000484328 ZHX1Q9UKY1 873 aaPredicted RBP7.28□□□□□ -1.24
NCL-209ENST00000484328 FAM184BQ9ULE4 1060 aa7.28□□□□□ -1.24
NCL-209ENST00000484328 GNEQ9Y223 722 aaKnown RBP7.28□□□□□ -1.24
NCL-209ENST00000484328 Q9Y3F1 56 aa7.28□□□□□ -1.24
NCL-209ENST00000484328 ATP6V1DQ9Y5K8 247 aa7.28□□□□□ -1.24
NCL-209ENST00000484328 MRVI1Q9Y6F6 885 aa7.28□□□□□ -1.24
NCL-209ENST00000484328 SYNRGQ9UMZ2 1314 aa7.27□□□□□ -1.24
NCL-209ENST00000484328 MSCO60682 206 aa7.27□□□□□ -1.25
NCL-209ENST00000484328 ADAMTS4O75173 837 aa7.27□□□□□ -1.25
NCL-209ENST00000484328 DUSP11O75319 330 aaKnown RBP7.27□□□□□ -1.25
NCL-209ENST00000484328 TXNP10599 105 aaKnown RBP7.27□□□□□ -1.25
NCL-209ENST00000484328 FXR2P51116 673 aaKnown RBP eCLIP7.27□□□□□ -1.254e-43■■□□□ 11.7
NCL-209ENST00000484328 TNFAIP2Q03169 654 aa7.27□□□□□ -1.25
NCL-209ENST00000484328 PTGDRQ13258 359 aa7.27□□□□□ -1.25
NCL-209ENST00000484328 PPP2R5CQ13362 524 aa7.27□□□□□ -1.25
NCL-209ENST00000484328 NEDD9Q14511 834 aa7.27□□□□□ -1.25
NCL-209ENST00000484328 SLC39A14Q15043 492 aa7.27□□□□□ -1.25
NCL-209ENST00000484328 SF3A1Q15459 793 aaKnown RBP7.27□□□□□ -1.25
NCL-209ENST00000484328 ZNF174Q15697 407 aa7.27□□□□□ -1.25
NCL-209ENST00000484328 CALCRLQ16602 461 aa7.27□□□□□ -1.25
NCL-209ENST00000484328 CELF3Q5SZQ8 465 aaKnown RBP7.27□□□□□ -1.25
NCL-209ENST00000484328 LRCH2Q5VUJ6 765 aa7.27□□□□□ -1.25
NCL-209ENST00000484328 FOXD4L5Q5VV16 416 aaPredicted RBP7.27□□□□□ -1.25
NCL-209ENST00000484328 METTL7BQ6UX53 244 aa7.27□□□□□ -1.25
NCL-209ENST00000484328 SLFN12Q8IYM2 578 aa7.27□□□□□ -1.25
NCL-209ENST00000484328 IGSF22Q8N9C0 903 aa7.27□□□□□ -1.25
NCL-209ENST00000484328 LINC00301Q8NCQ3 95 aa7.27□□□□□ -1.25
NCL-209ENST00000484328 FOXD4L4Q8WXT5 416 aaPredicted RBP7.27□□□□□ -1.25
NCL-209ENST00000484328 CHAMP1Q96JM3 812 aa7.27□□□□□ -1.25
NCL-209ENST00000484328 ZNF577Q9BSK1 485 aa7.27□□□□□ -1.25
NCL-209ENST00000484328 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.27□□□□□ -1.25
NCL-209ENST00000484328 JPH1Q9HDC5 661 aaPredicted RBP7.27□□□□□ -1.25
NCL-209ENST00000484328 HMX1Q9NP08 348 aaPredicted RBP7.27□□□□□ -1.25
NCL-209ENST00000484328 TBC1D22BQ9NU19 505 aa7.27□□□□□ -1.25
NCL-209ENST00000484328 DDX20Q9UHI6 824 aaKnown RBP7.27□□□□□ -1.25
NCL-209ENST00000484328 FBXO2Q9UK22 296 aaPredicted RBP7.27□□□□□ -1.25
NCL-209ENST00000484328 CEP131Q9UPN4 1083 aa7.27□□□□□ -1.25
NCL-209ENST00000484328 CLIC4Q9Y696 253 aa7.27□□□□□ -1.25
NCL-209ENST00000484328 SCN10AQ9Y5Y9 1956 aa7.27□□□□□ -1.25
NCL-209ENST00000484328 ELP1O95163 1332 aa7.27□□□□□ -1.25
NCL-209ENST00000484328 EMSYQ7Z589 1322 aa7.27□□□□□ -1.25
NCL-209ENST00000484328 BRCA2P51587 3418 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 IGKV6D-21A0A0A0MT36 114 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 A6NJR5 290 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 GAS7O60861 476 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 PPP6R2O75170 966 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 ATG7O95352 703 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 GGPS1O95749 300 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 CCNE2O96020 404 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 GH1P01241 217 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 CCL5P13501 91 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 ATP2B1P20020 1258 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 PTGS1P23219 599 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 CST5P28325 142 aaPredicted RBP7.26□□□□□ -1.25
NCL-209ENST00000484328 GJA9P57773 515 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 KRT85P78386 507 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 KRT76Q01546 638 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 LAMC2Q13753 1193 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 IL17AQ16552 155 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 LY6KQ17RY6 165 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 HSDL1Q3SXM5 330 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 GJC2Q5T442 439 aaPredicted RBP7.26□□□□□ -1.25
NCL-209ENST00000484328 LHX8Q68G74 356 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 ZNF746Q6NUN9 644 aaPredicted RBP7.26□□□□□ -1.25
NCL-209ENST00000484328 TLK2Q86UE8 772 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 SMAP1Q8IYB5 467 aaPredicted RBP7.26□□□□□ -1.25
NCL-209ENST00000484328 TMEM87AQ8NBN3 555 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 RDM1Q8NG50 284 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 PPTC7Q8NI37 304 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 KCNG4Q8TDN1 519 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 LEO1Q8WVC0 666 aaPredicted RBP7.26□□□□□ -1.25
NCL-209ENST00000484328 COPS5Q92905 334 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 TNPO1Q92973 898 aaKnown RBP7.26□□□□□ -1.25
NCL-209ENST00000484328 FERMT2Q96AC1 680 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 LENG1Q96BZ8 264 aaPredicted RBP7.26□□□□□ -1.25
NCL-209ENST00000484328 SDF4Q9BRK5 362 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 TEKT3Q9BXF9 490 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 MCOLN1Q9GZU1 580 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 CRISPLD2Q9H0B8 497 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 UNC93B1Q9H1C4 597 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 UNC45AQ9H3U1 944 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 BCAS3Q9H6U6 928 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 RCOR1Q9UKL0 485 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 CFAP45Q9UL16 551 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 IGSF9BQ9UPX0 1349 aa7.26□□□□□ -1.25
NCL-209ENST00000484328 POTEMA6NI47 508 aa7.25□□□□□ -1.25
NCL-209ENST00000484328 LGR5O75473 907 aa7.25□□□□□ -1.25
NCL-209ENST00000484328 BAG4O95429 457 aaKnown RBP7.25□□□□□ -1.25
NCL-209ENST00000484328 MMP3P08254 477 aa7.25□□□□□ -1.25
NCL-209ENST00000484328 RARBP10826 455 aa7.25□□□□□ -1.25
NCL-209ENST00000484328 SFNP31947 248 aa7.25□□□□□ -1.25
NCL-209ENST00000484328 JAK3P52333 1124 aa7.25□□□□□ -1.25
NCL-209ENST00000484328 ACTR2P61160 394 aa7.25□□□□□ -1.25
NCL-209ENST00000484328 GRIN1Q05586 938 aa7.25□□□□□ -1.25
NCL-209ENST00000484328 PDIA5Q14554 519 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms