RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 ARHGEF15O94989 841 aa22.09■■□□□ 1.13
NDUFA3-213ENST00000484103 SMIM10L2AP0DMW4 78 aa22.09■■□□□ 1.13
NDUFA3-213ENST00000484103 SMIM10L2BP0DMW5 78 aa22.09■■□□□ 1.13
NDUFA3-213ENST00000484103 PTK7Q13308 1070 aa22.09■■□□□ 1.13
NDUFA3-213ENST00000484103 FAM117BQ6P1L5 589 aa22.09■■□□□ 1.13
NDUFA3-213ENST00000484103 HERC6Q8IVU3 1022 aa22.09■■□□□ 1.13
NDUFA3-213ENST00000484103 RASEFQ8IZ41 740 aa22.09■■□□□ 1.13
NDUFA3-213ENST00000484103 ATP6V0A1Q93050 837 aa22.09■■□□□ 1.13
NDUFA3-213ENST00000484103 SLC9A7Q96T83 725 aa22.09■■□□□ 1.13
NDUFA3-213ENST00000484103 MTA3Q9BTC8 594 aa22.09■■□□□ 1.13
NDUFA3-213ENST00000484103 TUT1Q9H6E5 874 aaKnown RBP22.09■■□□□ 1.13
NDUFA3-213ENST00000484103 TET1Q8NFU7 2136 aa22.09■■□□□ 1.13
NDUFA3-213ENST00000484103 VCANP13611 3396 aa22.08■■□□□ 1.13
NDUFA3-213ENST00000484103 CTSHP09668 335 aa22.08■■□□□ 1.13
NDUFA3-213ENST00000484103 HOXD8P13378 290 aaPredicted RBP22.08■■□□□ 1.13
NDUFA3-213ENST00000484103 CPA1P15085 419 aa22.08■■□□□ 1.13
NDUFA3-213ENST00000484103 DEFB103AP81534 67 aa22.08■■□□□ 1.13
NDUFA3-213ENST00000484103 NEDD9Q14511 834 aa22.08■■□□□ 1.13
NDUFA3-213ENST00000484103 PCNX4Q63HM2 1172 aa22.08■■□□□ 1.13
NDUFA3-213ENST00000484103 PGBD1Q96JS3 809 aa22.08■■□□□ 1.13
NDUFA3-213ENST00000484103 GPR20Q99678 358 aa22.08■■□□□ 1.13
NDUFA3-213ENST00000484103 ZBED2Q9BTP6 218 aa22.08■■□□□ 1.13
NDUFA3-213ENST00000484103 BRPF3Q9ULD4 1205 aa22.08■■□□□ 1.13
NDUFA3-213ENST00000484103 TLL1O43897 1013 aa22.07■■□□□ 1.12
NDUFA3-213ENST00000484103 SMARCA1P28370 1054 aa22.07■■□□□ 1.12
NDUFA3-213ENST00000484103 WDR5P61964 334 aaKnown RBP22.07■■□□□ 1.12
NDUFA3-213ENST00000484103 APOA5Q6Q788 366 aa22.07■■□□□ 1.12
NDUFA3-213ENST00000484103 METTL7BQ6UX53 244 aa22.07■■□□□ 1.12
NDUFA3-213ENST00000484103 SPRED2Q7Z698 418 aa22.07■■□□□ 1.12
NDUFA3-213ENST00000484103 NLRX1Q86UT6 975 aa22.07■■□□□ 1.12
NDUFA3-213ENST00000484103 ARNTL2Q8WYA1 636 aa22.07■■□□□ 1.12
NDUFA3-213ENST00000484103 SETD4Q9NVD3 440 aa22.07■■□□□ 1.12
NDUFA3-213ENST00000484103 CHD7Q9P2D1 2997 aa22.07■■□□□ 1.12
NDUFA3-213ENST00000484103 KLF18A0A0U1RQI7 1052 aa22.06■■□□□ 1.12
NDUFA3-213ENST00000484103 SPDYE3A6NKU9 549 aa22.06■■□□□ 1.12
NDUFA3-213ENST00000484103 GOLGA8AA7E2F4 631 aa22.06■■□□□ 1.12
NDUFA3-213ENST00000484103 GOLGA8BA8MQT2 603 aa22.06■■□□□ 1.12
NDUFA3-213ENST00000484103 PIK3CDO00329 1044 aa22.06■■□□□ 1.12
NDUFA3-213ENST00000484103 TREHO43280 583 aa22.06■■□□□ 1.12
NDUFA3-213ENST00000484103 STAM2O75886 525 aa22.06■■□□□ 1.12
NDUFA3-213ENST00000484103 MARK3P27448 753 aa22.06■■□□□ 1.12
NDUFA3-213ENST00000484103 ICAM3P32942 547 aa22.06■■□□□ 1.12
NDUFA3-213ENST00000484103 FGD1P98174 961 aa22.06■■□□□ 1.12
NDUFA3-213ENST00000484103 RTN1Q16799 776 aa22.06■■□□□ 1.12
NDUFA3-213ENST00000484103 TRIM71Q2Q1W2 868 aaKnown RBP22.06■■□□□ 1.12
NDUFA3-213ENST00000484103 WWC2Q6AWC2 1192 aa22.06■■□□□ 1.12
NDUFA3-213ENST00000484103 CNKSR3Q6P9H4 555 aa22.06■■□□□ 1.12
NDUFA3-213ENST00000484103 CCDC136Q96JN2 1154 aa22.06■■□□□ 1.12
NDUFA3-213ENST00000484103 LCHNA4D1U4 455 aa22.05■■□□□ 1.12
NDUFA3-213ENST00000484103 EPOPA6NHQ4 379 aa22.05■■□□□ 1.12
NDUFA3-213ENST00000484103 KIF28PB7ZC32 967 aa22.05■■□□□ 1.12
NDUFA3-213ENST00000484103 ZBTB43O43298 467 aa22.05■■□□□ 1.12
NDUFA3-213ENST00000484103 BAIAP3O94812 1187 aa22.05■■□□□ 1.12
NDUFA3-213ENST00000484103 NAPAP54920 295 aa22.05■■□□□ 1.12
NDUFA3-213ENST00000484103 MBTPS1Q14703 1052 aa22.05■■□□□ 1.12
NDUFA3-213ENST00000484103 SGMS1Q86VZ5 419 aa22.05■■□□□ 1.12
NDUFA3-213ENST00000484103 RNPEPQ9H4A4 650 aa22.05■■□□□ 1.12
NDUFA3-213ENST00000484103 MTUS1Q9ULD2 1270 aa22.05■■□□□ 1.12
NDUFA3-213ENST00000484103 PCDHA6Q9UN73 950 aa22.05■■□□□ 1.12
NDUFA3-213ENST00000484103 PCDHA8Q9Y5H6 950 aa22.05■■□□□ 1.12
NDUFA3-213ENST00000484103 CNTNAP5Q8WYK1 1306 aa22.05■■□□□ 1.12
NDUFA3-213ENST00000484103 ATP9AO75110 1047 aa22.04■■□□□ 1.12
NDUFA3-213ENST00000484103 ARHGAP4P98171 946 aa22.04■■□□□ 1.12
NDUFA3-213ENST00000484103 SKIV2LQ15477 1246 aaKnown RBP22.04■■□□□ 1.12
NDUFA3-213ENST00000484103 KRT40Q6A162 431 aa22.04■■□□□ 1.12
NDUFA3-213ENST00000484103 TRAF7Q6Q0C0 670 aa22.04■■□□□ 1.12
NDUFA3-213ENST00000484103 DHX32Q7L7V1 743 aaKnown RBP22.04■■□□□ 1.12
NDUFA3-213ENST00000484103 PHOSPHO2Q8TCD6 241 aa22.04■■□□□ 1.12
NDUFA3-213ENST00000484103 USP26Q9BXU7 913 aa22.04■■□□□ 1.12
NDUFA3-213ENST00000484103 PTPRSQ13332 1948 aa22.04■■□□□ 1.12
NDUFA3-213ENST00000484103 RSPH10B2B2RC85 870 aa22.03■■□□□ 1.12
NDUFA3-213ENST00000484103 RSPH10BP0C881 870 aa22.03■■□□□ 1.12
NDUFA3-213ENST00000484103 ITGB5P18084 799 aa22.03■■□□□ 1.12
NDUFA3-213ENST00000484103 EXOSC10Q01780 885 aaKnown RBP22.03■■□□□ 1.12
NDUFA3-213ENST00000484103 TAP1Q03518 808 aa22.03■■□□□ 1.12
NDUFA3-213ENST00000484103 RBL2Q08999 1139 aa22.03■■□□□ 1.12
NDUFA3-213ENST00000484103 MTMR1Q13613 665 aa22.03■■□□□ 1.12
NDUFA3-213ENST00000484103 TYW1BQ6NUM6 668 aa22.03■■□□□ 1.12
NDUFA3-213ENST00000484103 SERINC5Q86VE9 423 aa22.03■■□□□ 1.12
NDUFA3-213ENST00000484103 RBM28Q9NW13 759 aaKnown RBP22.03■■□□□ 1.12
NDUFA3-213ENST00000484103 ZNF215Q9UL58 517 aaPredicted RBP22.03■■□□□ 1.12
NDUFA3-213ENST00000484103 V9GY48 417 aaPredicted RBP22.03■■□□□ 1.12
NDUFA3-213ENST00000484103 MYO9BQ13459 2157 aa22.03■■□□□ 1.12
NDUFA3-213ENST00000484103 CXCL10P02778 98 aa22.02■■□□□ 1.12
NDUFA3-213ENST00000484103 TCF7P36402 384 aaPredicted RBP22.02■■□□□ 1.12
NDUFA3-213ENST00000484103 IKBKEQ14164 716 aa22.02■■□□□ 1.12
NDUFA3-213ENST00000484103 XRRA1Q6P2D8 792 aa22.02■■□□□ 1.12
NDUFA3-213ENST00000484103 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.02■■□□□ 1.12
NDUFA3-213ENST00000484103 JAKMIP1Q96N16 626 aaKnown RBP22.02■■□□□ 1.12
NDUFA3-213ENST00000484103 OSBPL7Q9BZF2 842 aa22.02■■□□□ 1.12
NDUFA3-213ENST00000484103 PPFIA3O75145 1194 aa22.01■■□□□ 1.11
NDUFA3-213ENST00000484103 LGR5O75473 907 aa22.01■■□□□ 1.11
NDUFA3-213ENST00000484103 KCNA2P16389 499 aa22.01■■□□□ 1.11
NDUFA3-213ENST00000484103 APOBRQ0VD83 1088 aa22.01■■□□□ 1.11
NDUFA3-213ENST00000484103 DBF4BQ8NFT6 615 aa22.01■■□□□ 1.11
NDUFA3-213ENST00000484103 GPRASP2Q96D09 838 aa22.01■■□□□ 1.11
NDUFA3-213ENST00000484103 UIMC1Q96RL1 719 aa22.01■■□□□ 1.11
NDUFA3-213ENST00000484103 TMEM260Q9NX78 707 aa22.01■■□□□ 1.11
NDUFA3-213ENST00000484103 PARNO95453 639 aaKnown RBP22■■□□□ 1.11
NDUFA3-213ENST00000484103 NEFLP07196 543 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms