RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 ZNF577Q9BSK1 485 aa15.7■□□□□ 0.1
CLK3-204ENST00000483723 EXOC1Q9NV70 894 aa15.7■□□□□ 0.1
CLK3-204ENST00000483723 NRBP1Q9UHY1 535 aa15.7■□□□□ 0.1
CLK3-204ENST00000483723 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.7■□□□□ 0.1
CLK3-204ENST00000483723 IPO5O00410 1097 aaKnown RBP15.69■□□□□ 0.1
CLK3-204ENST00000483723 DHX15O43143 795 aaKnown RBP15.69■□□□□ 0.1
CLK3-204ENST00000483723 GAS7O60861 476 aa15.69■□□□□ 0.1
CLK3-204ENST00000483723 STX17P56962 302 aa15.69■□□□□ 0.1
CLK3-204ENST00000483723 UBASH3AP57075 661 aa15.69■□□□□ 0.1
CLK3-204ENST00000483723 STK4Q13043 487 aa15.69■□□□□ 0.1
CLK3-204ENST00000483723 EPHA7Q15375 998 aa15.69■□□□□ 0.1
CLK3-204ENST00000483723 NSMFQ6X4W1 530 aa15.69■□□□□ 0.1
CLK3-204ENST00000483723 CCDC186Q7Z3E2 898 aa15.69■□□□□ 0.1
CLK3-204ENST00000483723 VSIG10LQ86VR7 867 aa15.69■□□□□ 0.1
CLK3-204ENST00000483723 DRC7Q8IY82 874 aa15.69■□□□□ 0.1
CLK3-204ENST00000483723 SYT2Q8N9I0 419 aaPredicted RBP15.69■□□□□ 0.1
CLK3-204ENST00000483723 CHST13Q8NET6 341 aa15.69■□□□□ 0.1
CLK3-204ENST00000483723 ZFP91Q96JP5 570 aaPredicted RBP15.69■□□□□ 0.1
CLK3-204ENST00000483723 NAP1L5Q96NT1 182 aaPredicted RBP15.69■□□□□ 0.1
CLK3-204ENST00000483723 TEKT3Q9BXF9 490 aa15.69■□□□□ 0.1
CLK3-204ENST00000483723 ACAD9Q9H845 621 aa15.69■□□□□ 0.1
CLK3-204ENST00000483723 RRAGDQ9NQL2 400 aaPredicted RBP15.69■□□□□ 0.1
CLK3-204ENST00000483723 KCNH7Q9NS40 1196 aa15.69■□□□□ 0.1
CLK3-204ENST00000483723 IMPACTQ9P2X3 320 aa15.69■□□□□ 0.1
CLK3-204ENST00000483723 CTNND2Q9UQB3 1225 aa15.69■□□□□ 0.1
CLK3-204ENST00000483723 LRRC10BA6NIK2 292 aa15.68■□□□□ 0.1
CLK3-204ENST00000483723 SLITRK3O94933 977 aa15.68■□□□□ 0.1
CLK3-204ENST00000483723 CYP11B2P19099 503 aa15.68■□□□□ 0.1
CLK3-204ENST00000483723 TTLL12Q14166 644 aaPredicted RBP15.68■□□□□ 0.1
CLK3-204ENST00000483723 CCDC144BQ3MJ40 725 aa15.68■□□□□ 0.1
CLK3-204ENST00000483723 APTXQ7Z2E3 356 aaKnown RBP15.68■□□□□ 0.1
CLK3-204ENST00000483723 RIOX2Q8IUF8 465 aa15.68■□□□□ 0.1
CLK3-204ENST00000483723 AGO4Q9HCK5 861 aaKnown RBP15.68■□□□□ 0.1
CLK3-204ENST00000483723 BMP2KQ9NSY1 1161 aaPredicted RBP15.68■□□□□ 0.1
CLK3-204ENST00000483723 CYP39A1Q9NYL5 469 aa15.68■□□□□ 0.1
CLK3-204ENST00000483723 DNM3Q9UQ16 869 aa15.68■□□□□ 0.1
CLK3-204ENST00000483723 FRMD3A2A2Y4 597 aa15.68■□□□□ 0.1
CLK3-204ENST00000483723 POTEFA5A3E0 1075 aa15.68■□□□□ 0.1
CLK3-204ENST00000483723 SERPINC1P01008 464 aa15.68■□□□□ 0.1
CLK3-204ENST00000483723 POTEIP0CG38 1075 aa15.68■□□□□ 0.1
CLK3-204ENST00000483723 EIF2AK2P19525 551 aaKnown RBP15.68■□□□□ 0.1
CLK3-204ENST00000483723 PSMC6P62333 389 aa15.68■□□□□ 0.1
CLK3-204ENST00000483723 STIM1Q13586 685 aa15.68■□□□□ 0.1
CLK3-204ENST00000483723 POTEGQ6S5H5 508 aa15.68■□□□□ 0.1
CLK3-204ENST00000483723 GADL1Q6ZQY3 521 aa15.68■□□□□ 0.1
CLK3-204ENST00000483723 DYMQ7RTS9 669 aa15.68■□□□□ 0.1
CLK3-204ENST00000483723 KIAA0895Q8NCT3 520 aa15.68■□□□□ 0.1
CLK3-204ENST00000483723 OPTNQ96CV9 577 aa15.68■□□□□ 0.1
CLK3-204ENST00000483723 PURBQ96QR8 312 aaKnown RBP15.68■□□□□ 0.1
CLK3-204ENST00000483723 UNC45AQ9H3U1 944 aa15.68■□□□□ 0.1
CLK3-204ENST00000483723 A1CFQ9NQ94 594 aaKnown RBP15.68■□□□□ 0.1
CLK3-204ENST00000483723 BTBD7Q9P203 1132 aa15.68■□□□□ 0.1
CLK3-204ENST00000483723 AGTPBP1Q9UPW5 1226 aa15.68■□□□□ 0.1
CLK3-204ENST00000483723 PSMA7O14818 248 aa15.67■□□□□ 0.1
CLK3-204ENST00000483723 EYA4O95677 639 aa15.67■□□□□ 0.1
CLK3-204ENST00000483723 FCER1AP12319 257 aa15.67■□□□□ 0.1
CLK3-204ENST00000483723 CDK11BP21127 795 aaKnown RBP15.67■□□□□ 0.1
CLK3-204ENST00000483723 PTGS1P23219 599 aa15.67■□□□□ 0.1
CLK3-204ENST00000483723 CCNE1P24864 410 aa15.67■□□□□ 0.1
CLK3-204ENST00000483723 NR1I3Q14994 352 aa15.67■□□□□ 0.1
CLK3-204ENST00000483723 ARSHQ5FYA8 562 aa15.67■□□□□ 0.1
CLK3-204ENST00000483723 ARHGEF16Q5VV41 709 aa15.67■□□□□ 0.1
CLK3-204ENST00000483723 TTI2Q6NXR4 508 aa15.67■□□□□ 0.1
CLK3-204ENST00000483723 FASTKD5Q7L8L6 764 aaKnown RBP15.67■□□□□ 0.1
CLK3-204ENST00000483723 ZNF830Q96NB3 372 aaPredicted RBP15.67■□□□□ 0.1
CLK3-204ENST00000483723 KCNF1Q9H3M0 494 aa15.67■□□□□ 0.1
CLK3-204ENST00000483723 INTS13Q9NVM9 706 aa15.67■□□□□ 0.1
CLK3-204ENST00000483723 RGL1Q9NZL6 768 aa15.67■□□□□ 0.1
CLK3-204ENST00000483723 MAPK8IP1Q9UQF2 711 aa15.67■□□□□ 0.1
CLK3-204ENST00000483723 LCTP09848 1927 aa15.67■□□□□ 0.1
CLK3-204ENST00000483723 MAFGO15525 162 aa15.66■□□□□ 0.1
CLK3-204ENST00000483723 NR3C2P08235 984 aa15.66■□□□□ 0.1
CLK3-204ENST00000483723 POTEJP0CG39 1038 aa15.66■□□□□ 0.1
CLK3-204ENST00000483723 GJA5P36382 358 aa15.66■□□□□ 0.1
CLK3-204ENST00000483723 GPAT2Q6NUI2 795 aa15.66■□□□□ 0.1
CLK3-204ENST00000483723 FOXR2Q6PJQ5 311 aa15.66■□□□□ 0.1
CLK3-204ENST00000483723 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.66■□□□□ 0.1
CLK3-204ENST00000483723 GPBP1Q86WP2 473 aa15.66■□□□□ 0.1
CLK3-204ENST00000483723 NEK9Q8TD19 979 aa15.66■□□□□ 0.1
CLK3-204ENST00000483723 NSUN6Q8TEA1 469 aaKnown RBP15.66■□□□□ 0.1
CLK3-204ENST00000483723 DYDC2Q96IM9 177 aa15.66■□□□□ 0.1
CLK3-204ENST00000483723 ASCC2Q9H1I8 757 aaPredicted RBP15.66■□□□□ 0.1
CLK3-204ENST00000483723 TBC1D22BQ9NU19 505 aa15.66■□□□□ 0.1
CLK3-204ENST00000483723 LIMA1Q9UHB6 759 aaKnown RBP15.66■□□□□ 0.1
CLK3-204ENST00000483723 CLEC11AQ9Y240 323 aa15.66■□□□□ 0.1
CLK3-204ENST00000483723 A0A1B0GTH6 734 aa15.65■□□□□ 0.1
CLK3-204ENST00000483723 ZNF500O60304 480 aaPredicted RBP15.65■□□□□ 0.1
CLK3-204ENST00000483723 CNMDO75829 334 aa15.65■□□□□ 0.1
CLK3-204ENST00000483723 CCND2P30279 289 aa15.65■□□□□ 0.1
CLK3-204ENST00000483723 PMS1P54277 932 aaKnown RBP15.65■□□□□ 0.1
CLK3-204ENST00000483723 ITGB3BPQ13352 177 aaPredicted RBP15.65■□□□□ 0.1
CLK3-204ENST00000483723 MTMR1Q13613 665 aa15.65■□□□□ 0.1
CLK3-204ENST00000483723 CENPPQ6IPU0 288 aa15.65■□□□□ 0.1
CLK3-204ENST00000483723 IRF2BP1Q8IU81 584 aa15.65■□□□□ 0.1
CLK3-204ENST00000483723 GUF1Q8N442 669 aaKnown RBP15.65■□□□□ 0.1
CLK3-204ENST00000483723 P2RX5Q93086 422 aa15.65■□□□□ 0.1
CLK3-204ENST00000483723 GPRASP2Q96D09 838 aa15.65■□□□□ 0.1
CLK3-204ENST00000483723 DUSP9Q99956 384 aaKnown RBP15.65■□□□□ 0.1
CLK3-204ENST00000483723 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.65■□□□□ 0.1
CLK3-204ENST00000483723 FBXO40Q9UH90 709 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms