RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 CYFIP1Q7L576 1253 aa17.75■□□□□ 0.43
RPP40-206ENST00000483546 PLA2G4DQ86XP0 818 aa17.75■□□□□ 0.43
RPP40-206ENST00000483546 TBCKQ8TEA7 893 aa17.75■□□□□ 0.43
RPP40-206ENST00000483546 C8orf76Q96K31 380 aa17.75■□□□□ 0.43
RPP40-206ENST00000483546 NAP1L4Q99733 375 aaKnown RBP17.75■□□□□ 0.43
RPP40-206ENST00000483546 SDF4Q9BRK5 362 aa17.75■□□□□ 0.43
RPP40-206ENST00000483546 DCDC2CA8MYV0 355 aa17.74■□□□□ 0.43
RPP40-206ENST00000483546 FAM86B1E9PN63 330 aa17.74■□□□□ 0.43
RPP40-206ENST00000483546 FAM86B2P0C5J1 330 aa17.74■□□□□ 0.43
RPP40-206ENST00000483546 PTPN11Q06124 597 aaPredicted RBP17.74■□□□□ 0.43
RPP40-206ENST00000483546 HSDL1Q3SXM5 330 aa17.74■□□□□ 0.43
RPP40-206ENST00000483546 TRIM60Q495X7 471 aa17.74■□□□□ 0.43
RPP40-206ENST00000483546 PRPF38BQ5VTL8 546 aaKnown RBP17.74■□□□□ 0.43
RPP40-206ENST00000483546 KRT40Q6A162 431 aa17.74■□□□□ 0.43
RPP40-206ENST00000483546 NFRKBQ6P4R8 1299 aa17.74■□□□□ 0.43
RPP40-206ENST00000483546 C7orf61Q8IZ16 206 aa17.74■□□□□ 0.43
RPP40-206ENST00000483546 AGO4Q9HCK5 861 aaKnown RBP17.74■□□□□ 0.43
RPP40-206ENST00000483546 ATP11BQ9Y2G3 1177 aa17.74■□□□□ 0.43
RPP40-206ENST00000483546 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.74■□□□□ 0.43
RPP40-206ENST00000483546 CYP3A7-CYP3A51PA0A087WV96 503 aa17.73■□□□□ 0.43
RPP40-206ENST00000483546 TLR3O15455 904 aaKnown RBP17.73■□□□□ 0.43
RPP40-206ENST00000483546 ATP9AO75110 1047 aa17.73■□□□□ 0.43
RPP40-206ENST00000483546 F2P00734 622 aa17.73■□□□□ 0.43
RPP40-206ENST00000483546 GCFC2P16383 781 aaKnown RBP17.73■□□□□ 0.43
RPP40-206ENST00000483546 CYP3A7P24462 503 aa17.73■□□□□ 0.43
RPP40-206ENST00000483546 CYP2W1Q8TAV3 490 aa17.73■□□□□ 0.43
RPP40-206ENST00000483546 GPR20Q99678 358 aa17.73■□□□□ 0.43
RPP40-206ENST00000483546 JPH1Q9HDC5 661 aaPredicted RBP17.73■□□□□ 0.43
RPP40-206ENST00000483546 GJB4Q9NTQ9 266 aa17.73■□□□□ 0.43
RPP40-206ENST00000483546 TBC1D22BQ9NU19 505 aa17.73■□□□□ 0.43
RPP40-206ENST00000483546 PRKAG2Q9UGJ0 569 aa17.73■□□□□ 0.43
RPP40-206ENST00000483546 ARP10275 920 aa17.72■□□□□ 0.43
RPP40-206ENST00000483546 TLE2Q04725 743 aa17.72■□□□□ 0.43
RPP40-206ENST00000483546 Q4G0T1 1027 aa17.72■□□□□ 0.43
RPP40-206ENST00000483546 NEK8Q86SG6 692 aa17.72■□□□□ 0.43
RPP40-206ENST00000483546 SESTD1Q86VW0 696 aa17.72■□□□□ 0.43
RPP40-206ENST00000483546 DIS3L2Q8IYB7 885 aaKnown RBP17.72■□□□□ 0.43
RPP40-206ENST00000483546 FBXO18Q8NFZ0 1043 aa17.72■□□□□ 0.43
RPP40-206ENST00000483546 MBOAT7Q96N66 472 aa17.72■□□□□ 0.43
RPP40-206ENST00000483546 SLC9A2Q9UBY0 812 aa17.72■□□□□ 0.43
RPP40-206ENST00000483546 IPO5O00410 1097 aaKnown RBP17.71■□□□□ 0.43
RPP40-206ENST00000483546 PQBP1O60828 265 aaKnown RBP17.71■□□□□ 0.43
RPP40-206ENST00000483546 CLTBP09497 229 aa17.71■□□□□ 0.43
RPP40-206ENST00000483546 CUL4AQ13619 759 aa17.71■□□□□ 0.43
RPP40-206ENST00000483546 INF2Q27J81 1249 aa17.71■□□□□ 0.43
RPP40-206ENST00000483546 PRR16Q569H4 304 aa17.71■□□□□ 0.43
RPP40-206ENST00000483546 PPP4R3AQ6IN85 833 aa17.71■□□□□ 0.43
RPP40-206ENST00000483546 PIK3AP1Q6ZUJ8 805 aa17.71■□□□□ 0.43
RPP40-206ENST00000483546 FAM126BQ8IXS8 530 aa17.71■□□□□ 0.43
RPP40-206ENST00000483546 OXER1Q8TDS5 423 aa17.71■□□□□ 0.43
RPP40-206ENST00000483546 SEPT1Q8WYJ6 367 aa17.71■□□□□ 0.43
RPP40-206ENST00000483546 TNFRSF25Q93038 417 aa17.71■□□□□ 0.43
RPP40-206ENST00000483546 SNX21Q969T3 373 aa17.71■□□□□ 0.43
RPP40-206ENST00000483546 LENG9Q96B70 501 aa17.71■□□□□ 0.43
RPP40-206ENST00000483546 ZNF577Q9BSK1 485 aa17.71■□□□□ 0.43
RPP40-206ENST00000483546 FOXP1Q9H334 677 aaPredicted RBP17.71■□□□□ 0.43
RPP40-206ENST00000483546 TCEAL9Q9UHQ7 104 aa17.71■□□□□ 0.43
RPP40-206ENST00000483546 ZNF215Q9UL58 517 aaPredicted RBP17.71■□□□□ 0.43
RPP40-206ENST00000483546 DNAH12Q6ZR08 3092 aa17.71■□□□□ 0.43
RPP40-206ENST00000483546 GRIN2DO15399 1336 aa17.71■□□□□ 0.42
RPP40-206ENST00000483546 CEP290O15078 2479 aa17.7■□□□□ 0.42
RPP40-206ENST00000483546 HAS3O00219 553 aa17.7■□□□□ 0.42
RPP40-206ENST00000483546 DTNBO60941 627 aa17.7■□□□□ 0.42
RPP40-206ENST00000483546 LGALS2P05162 132 aa17.7■□□□□ 0.42
RPP40-206ENST00000483546 SUPT20HL2P0C7V6 817 aa17.7■□□□□ 0.42
RPP40-206ENST00000483546 PSMC6P62333 389 aa17.7■□□□□ 0.42
RPP40-206ENST00000483546 NBPF20Q3BBV1 942 aa17.7■□□□□ 0.42
RPP40-206ENST00000483546 KAT2BQ92831 832 aa17.7■□□□□ 0.42
RPP40-206ENST00000483546 RIT2Q99578 217 aa17.7■□□□□ 0.42
RPP40-206ENST00000483546 C16orf70Q9BSU1 422 aa17.7■□□□□ 0.42
RPP40-206ENST00000483546 PKD2L1Q9P0L9 805 aa17.7■□□□□ 0.42
RPP40-206ENST00000483546 SMC3Q9UQE7 1217 aa17.7■□□□□ 0.42
RPP40-206ENST00000483546 KAT6AQ92794 2004 aa17.69■□□□□ 0.42
RPP40-206ENST00000483546 BTBD18B2RXH4 712 aa17.69■□□□□ 0.42
RPP40-206ENST00000483546 H0YGN5 161 aa17.69■□□□□ 0.42
RPP40-206ENST00000483546 H3BRB1 525 aa17.69■□□□□ 0.42
RPP40-206ENST00000483546 EDIL3O43854 480 aa17.69■□□□□ 0.42
RPP40-206ENST00000483546 SORBS3O60504 671 aa17.69■□□□□ 0.42
RPP40-206ENST00000483546 CD4P01730 458 aa17.69■□□□□ 0.42
RPP40-206ENST00000483546 TCF7P36402 384 aaPredicted RBP17.69■□□□□ 0.42
RPP40-206ENST00000483546 PSEN2P49810 448 aa17.69■□□□□ 0.42
RPP40-206ENST00000483546 KRT76Q01546 638 aa17.69■□□□□ 0.42
RPP40-206ENST00000483546 NR5A1Q13285 461 aa17.69■□□□□ 0.42
RPP40-206ENST00000483546 ITGB3BPQ13352 177 aaPredicted RBP17.69■□□□□ 0.42
RPP40-206ENST00000483546 MFSD10Q14728 455 aa17.69■□□□□ 0.42
RPP40-206ENST00000483546 TUT1Q9H6E5 874 aaKnown RBP17.69■□□□□ 0.42
RPP40-206ENST00000483546 BCAS3Q9H6U6 928 aa17.69■□□□□ 0.42
RPP40-206ENST00000483546 PDLIM7Q9NR12 457 aa17.69■□□□□ 0.42
RPP40-206ENST00000483546 LTBP2Q14767 1821 aa17.69■□□□□ 0.42
RPP40-206ENST00000483546 EMSYQ7Z589 1322 aa17.69■□□□□ 0.42
RPP40-206ENST00000483546 MYH9P35579 1960 aaKnown RBP17.68■□□□□ 0.42
RPP40-206ENST00000483546 K7ELQ4 463 aaPredicted RBP17.68■□□□□ 0.42
RPP40-206ENST00000483546 KIAA0355O15063 1070 aa17.68■□□□□ 0.42
RPP40-206ENST00000483546 DHX15O43143 795 aaKnown RBP17.68■□□□□ 0.42
RPP40-206ENST00000483546 ZNF286BP0CG31 522 aa17.68■□□□□ 0.42
RPP40-206ENST00000483546 FAAP100Q0VG06 881 aa17.68■□□□□ 0.42
RPP40-206ENST00000483546 KIAA0753Q2KHM9 967 aa17.68■□□□□ 0.42
RPP40-206ENST00000483546 LETM2Q2VYF4 491 aa17.68■□□□□ 0.42
RPP40-206ENST00000483546 ZNF746Q6NUN9 644 aaPredicted RBP17.68■□□□□ 0.42
RPP40-206ENST00000483546 SMAP1Q8IYB5 467 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms