RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 TRAPPC10P48553 1259 aa20.2■□□□□ 0.82
CPNE1-224ENST00000483359 NEDD9Q14511 834 aa20.2■□□□□ 0.82
CPNE1-224ENST00000483359 RILPL1Q5EBL4 403 aa20.2■□□□□ 0.82
CPNE1-224ENST00000483359 CELF3Q5SZQ8 465 aaKnown RBP20.2■□□□□ 0.82
CPNE1-224ENST00000483359 KIAA0100Q14667 2235 aaKnown RBP20.19■□□□□ 0.82
CPNE1-224ENST00000483359 HSDL1Q3SXM5 330 aa20.19■□□□□ 0.82
CPNE1-224ENST00000483359 AFG1LQ8WV93 481 aa20.19■□□□□ 0.82
CPNE1-224ENST00000483359 SPATA33Q96N06 139 aa20.19■□□□□ 0.82
CPNE1-224ENST00000483359 SDF4Q9BRK5 362 aa20.19■□□□□ 0.82
CPNE1-224ENST00000483359 FTOQ9C0B1 505 aaKnown RBP eCLIP20.19■□□□□ 0.825e-10■□□□□ 9.7
CPNE1-224ENST00000483359 SPC25Q9HBM1 224 aa20.19■□□□□ 0.82
CPNE1-224ENST00000483359 MKI67P46013 3256 aaKnown RBP20.19■□□□□ 0.82
CPNE1-224ENST00000483359 MARCH6O60337 910 aa20.19■□□□□ 0.82
CPNE1-224ENST00000483359 GJA8P48165 433 aa20.19■□□□□ 0.82
CPNE1-224ENST00000483359 SOX10P56693 466 aa20.19■□□□□ 0.82
CPNE1-224ENST00000483359 ETNPPLQ8TBG4 499 aa20.19■□□□□ 0.82
CPNE1-224ENST00000483359 SENP7Q9BQF6 1050 aa20.19■□□□□ 0.82
CPNE1-224ENST00000483359 ZSCAN16Q9H4T2 348 aaPredicted RBP20.19■□□□□ 0.82
CPNE1-224ENST00000483359 JPH1Q9HDC5 661 aaPredicted RBP20.19■□□□□ 0.82
CPNE1-224ENST00000483359 ZDHHC9Q9Y397 364 aa20.19■□□□□ 0.82
CPNE1-224ENST00000483359 GJA9P57773 515 aa20.18■□□□□ 0.82
CPNE1-224ENST00000483359 CALCRLQ16602 461 aa20.18■□□□□ 0.82
CPNE1-224ENST00000483359 FSCN1Q16658 493 aaKnown RBP20.18■□□□□ 0.82
CPNE1-224ENST00000483359 METTL7BQ6UX53 244 aa20.18■□□□□ 0.82
CPNE1-224ENST00000483359 TMEM60Q9H2L4 133 aa20.18■□□□□ 0.82
CPNE1-224ENST00000483359 NOP56O00567 594 aaKnown RBP20.17■□□□□ 0.82
CPNE1-224ENST00000483359 CHMP2AO43633 222 aa20.17■□□□□ 0.82
CPNE1-224ENST00000483359 BRD1O95696 1058 aa20.17■□□□□ 0.82
CPNE1-224ENST00000483359 PDIA4P13667 645 aaKnown RBP20.17■□□□□ 0.82
CPNE1-224ENST00000483359 CEBPZQ03701 1054 aaKnown RBP20.17■□□□□ 0.82
CPNE1-224ENST00000483359 LAMC2Q13753 1193 aa20.17■□□□□ 0.82
CPNE1-224ENST00000483359 LRRC41Q15345 812 aa20.17■□□□□ 0.82
CPNE1-224ENST00000483359 GNASQ5JWF2 1037 aa20.17■□□□□ 0.82
CPNE1-224ENST00000483359 LRCH2Q5VUJ6 765 aa20.17■□□□□ 0.82
CPNE1-224ENST00000483359 RNF180Q86T96 592 aa20.17■□□□□ 0.82
CPNE1-224ENST00000483359 KCNMB3Q9NPA1 279 aa20.17■□□□□ 0.82
CPNE1-224ENST00000483359 OGDHLQ9ULD0 1010 aa20.17■□□□□ 0.82
CPNE1-224ENST00000483359 Q9Y3F1 56 aa20.17■□□□□ 0.82
CPNE1-224ENST00000483359 MYH15Q9Y2K3 1946 aa20.17■□□□□ 0.82
CPNE1-224ENST00000483359 CTAGE5O15320 804 aa20.17■□□□□ 0.82
CPNE1-224ENST00000483359 DHX15O43143 795 aaKnown RBP20.17■□□□□ 0.82
CPNE1-224ENST00000483359 GAS7O60861 476 aa20.17■□□□□ 0.82
CPNE1-224ENST00000483359 EN2P19622 333 aaPredicted RBP20.17■□□□□ 0.82
CPNE1-224ENST00000483359 DDIT3P35638 169 aa20.17■□□□□ 0.82
CPNE1-224ENST00000483359 GIMAP8Q8ND71 665 aaPredicted RBP20.17■□□□□ 0.82
CPNE1-224ENST00000483359 HAS1Q92839 578 aa20.17■□□□□ 0.82
CPNE1-224ENST00000483359 SLC5A5Q92911 643 aa20.17■□□□□ 0.82
CPNE1-224ENST00000483359 IPO9Q96P70 1041 aaKnown RBP20.17■□□□□ 0.82
CPNE1-224ENST00000483359 CRISPLD2Q9H0B8 497 aa20.17■□□□□ 0.82
CPNE1-224ENST00000483359 UPF3AQ9H1J1 476 aaKnown RBP20.17■□□□□ 0.82
CPNE1-224ENST00000483359 SLC9A2Q9UBY0 812 aa20.17■□□□□ 0.82
CPNE1-224ENST00000483359 MMP3P08254 477 aa20.16■□□□□ 0.82
CPNE1-224ENST00000483359 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.16■□□□□ 0.82
CPNE1-224ENST00000483359 NFASCO94856 1347 aa20.16■□□□□ 0.82
CPNE1-224ENST00000483359 TXKP42681 527 aa20.15■□□□□ 0.82
CPNE1-224ENST00000483359 CPT1AP50416 773 aa20.15■□□□□ 0.82
CPNE1-224ENST00000483359 PPTC7Q8NI37 304 aa20.15■□□□□ 0.82
CPNE1-224ENST00000483359 EMID1Q96A84 441 aaPredicted RBP20.15■□□□□ 0.82
CPNE1-224ENST00000483359 TEKT3Q9BXF9 490 aa20.15■□□□□ 0.82
CPNE1-224ENST00000483359 TBC1D22BQ9NU19 505 aa20.15■□□□□ 0.82
CPNE1-224ENST00000483359 DNAH12Q6ZR08 3092 aa20.15■□□□□ 0.82
CPNE1-224ENST00000483359 CCNE2O96020 404 aa20.15■□□□□ 0.82
CPNE1-224ENST00000483359 PTGDRQ13258 359 aa20.15■□□□□ 0.82
CPNE1-224ENST00000483359 KCNA10Q16322 511 aa20.15■□□□□ 0.82
CPNE1-224ENST00000483359 ARRDC4Q8NCT1 418 aa20.15■□□□□ 0.82
CPNE1-224ENST00000483359 TCEAL9Q9UHQ7 104 aa20.15■□□□□ 0.82
CPNE1-224ENST00000483359 KBTBD13C9JR72 458 aa20.14■□□□□ 0.81
CPNE1-224ENST00000483359 PSMD10O75832 226 aa20.14■□□□□ 0.81
CPNE1-224ENST00000483359 BAG4O95429 457 aaKnown RBP20.14■□□□□ 0.81
CPNE1-224ENST00000483359 MYL3P08590 195 aa20.14■□□□□ 0.81
CPNE1-224ENST00000483359 OR52Z1P0C646 297 aa20.14■□□□□ 0.81
CPNE1-224ENST00000483359 ZNF286BP0CG31 522 aa20.14■□□□□ 0.81
CPNE1-224ENST00000483359 SF3A1Q15459 793 aaKnown RBP20.14■□□□□ 0.81
CPNE1-224ENST00000483359 KLHDC9Q8NEP7 349 aa20.14■□□□□ 0.81
CPNE1-224ENST00000483359 DIS3LQ8TF46 1054 aaKnown RBP20.14■□□□□ 0.81
CPNE1-224ENST00000483359 CHAMP1Q96JM3 812 aa20.14■□□□□ 0.81
CPNE1-224ENST00000483359 GPR20Q99678 358 aa20.14■□□□□ 0.81
CPNE1-224ENST00000483359 CLIC4Q9Y696 253 aa20.14■□□□□ 0.81
CPNE1-224ENST00000483359 A6NJR5 290 aa20.14■□□□□ 0.81
CPNE1-224ENST00000483359 ASGR1P07306 291 aa20.14■□□□□ 0.81
CPNE1-224ENST00000483359 ACTR2P61160 394 aa20.14■□□□□ 0.81
CPNE1-224ENST00000483359 BRDTQ58F21 947 aaPredicted RBP20.14■□□□□ 0.81
CPNE1-224ENST00000483359 SLFN12Q8IYM2 578 aa20.14■□□□□ 0.81
CPNE1-224ENST00000483359 FERMT2Q96AC1 680 aa20.14■□□□□ 0.81
CPNE1-224ENST00000483359 FAM20AQ96MK3 541 aa20.14■□□□□ 0.81
CPNE1-224ENST00000483359 MTMR9Q96QG7 549 aa20.14■□□□□ 0.81
CPNE1-224ENST00000483359 USP28Q96RU2 1077 aa20.14■□□□□ 0.81
CPNE1-224ENST00000483359 RIT2Q99578 217 aa20.14■□□□□ 0.81
CPNE1-224ENST00000483359 UNC45AQ9H3U1 944 aa20.14■□□□□ 0.81
CPNE1-224ENST00000483359 SAMM50Q9Y512 469 aa20.14■□□□□ 0.81
CPNE1-224ENST00000483359 DNM1LO00429 736 aa20.13■□□□□ 0.81
CPNE1-224ENST00000483359 TBX3O15119 743 aa20.13■□□□□ 0.81
CPNE1-224ENST00000483359 CST5P28325 142 aaPredicted RBP20.13■□□□□ 0.81
CPNE1-224ENST00000483359 TCF7P36402 384 aaPredicted RBP20.13■□□□□ 0.81
CPNE1-224ENST00000483359 CHMP4BP1P59074 171 aa20.13■□□□□ 0.81
CPNE1-224ENST00000483359 ORC2Q13416 577 aaPredicted RBP20.13■□□□□ 0.81
CPNE1-224ENST00000483359 CXCL17Q6UXB2 119 aa20.13■□□□□ 0.81
CPNE1-224ENST00000483359 TRIM50Q86XT4 487 aa20.13■□□□□ 0.81
CPNE1-224ENST00000483359 TTC12Q9H892 705 aaPredicted RBP20.13■□□□□ 0.81
CPNE1-224ENST00000483359 ELP1O95163 1332 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms