RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 STXBP2Q15833 593 aa9.29□□□□□ -0.92
USP4-210ENST00000483212 ECM1Q16610 540 aa9.29□□□□□ -0.92
USP4-210ENST00000483212 LONRF3Q496Y0 759 aa9.29□□□□□ -0.92
USP4-210ENST00000483212 TMEM119Q4V9L6 283 aa9.29□□□□□ -0.92
USP4-210ENST00000483212 CCDC183Q5T5S1 534 aa9.29□□□□□ -0.92
USP4-210ENST00000483212 LRCH2Q5VUJ6 765 aa9.29□□□□□ -0.92
USP4-210ENST00000483212 MAMDC4Q6UXC1 1216 aa9.29□□□□□ -0.92
USP4-210ENST00000483212 KRBA2Q6ZNG9 492 aa9.29□□□□□ -0.92
USP4-210ENST00000483212 SH3RF1Q7Z6J0 888 aa9.29□□□□□ -0.92
USP4-210ENST00000483212 NLRX1Q86UT6 975 aa9.29□□□□□ -0.92
USP4-210ENST00000483212 CABP7Q86V35 215 aa9.29□□□□□ -0.92
USP4-210ENST00000483212 ELOA2Q8IYF1 753 aaPredicted RBP9.29□□□□□ -0.92
USP4-210ENST00000483212 MAML3Q96JK9 1138 aa9.29□□□□□ -0.92
USP4-210ENST00000483212 UNC45AQ9H3U1 944 aa9.29□□□□□ -0.92
USP4-210ENST00000483212 RNF186Q9NXI6 227 aa9.29□□□□□ -0.92
USP4-210ENST00000483212 LRWD1Q9UFC0 647 aa9.29□□□□□ -0.92
USP4-210ENST00000483212 IVNS1ABPQ9Y6Y0 642 aa9.29□□□□□ -0.92
USP4-210ENST00000483212 PLXNA1Q9UIW2 1896 aa9.29□□□□□ -0.92
USP4-210ENST00000483212 NFASCO94856 1347 aa9.29□□□□□ -0.92
USP4-210ENST00000483212 RBM47A0AV96 593 aaKnown RBP9.28□□□□□ -0.92
USP4-210ENST00000483212 ASB14A6NK59 587 aa9.28□□□□□ -0.92
USP4-210ENST00000483212 POLR2DO15514 142 aaKnown RBP9.28□□□□□ -0.92
USP4-210ENST00000483212 SLC26A4O43511 780 aa9.28□□□□□ -0.92
USP4-210ENST00000483212 MED24O75448 989 aa9.28□□□□□ -0.92
USP4-210ENST00000483212 ARIH2O95376 493 aa9.28□□□□□ -0.92
USP4-210ENST00000483212 TBC1D8O95759 1140 aa9.28□□□□□ -0.92
USP4-210ENST00000483212 CCNE2O96020 404 aa9.28□□□□□ -0.92
USP4-210ENST00000483212 SPATA31C1P0DKV0 1188 aa9.28□□□□□ -0.92
USP4-210ENST00000483212 LACTBP83111 547 aaPredicted RBP9.28□□□□□ -0.92
USP4-210ENST00000483212 MDM2Q00987 491 aaPredicted RBP9.28□□□□□ -0.92
USP4-210ENST00000483212 SP2Q02086 613 aa9.28□□□□□ -0.92
USP4-210ENST00000483212 PDE4DQ08499 809 aa9.28□□□□□ -0.92
USP4-210ENST00000483212 ZSCAN23Q3MJ62 389 aa9.28□□□□□ -0.92
USP4-210ENST00000483212 GNPTABQ3T906 1256 aa9.28□□□□□ -0.92
USP4-210ENST00000483212 PDXDC2PQ6P474 469 aa9.28□□□□□ -0.92
USP4-210ENST00000483212 ARMCX2Q7L311 632 aa9.28□□□□□ -0.92
USP4-210ENST00000483212 PDILTQ8N807 584 aa9.28□□□□□ -0.92
USP4-210ENST00000483212 MTRQ99707 1265 aa9.28□□□□□ -0.92
USP4-210ENST00000483212 SENP7Q9BQF6 1050 aa9.28□□□□□ -0.92
USP4-210ENST00000483212 TEKT3Q9BXF9 490 aa9.28□□□□□ -0.92
USP4-210ENST00000483212 RAB34Q9BZG1 259 aa9.28□□□□□ -0.92
USP4-210ENST00000483212 ARHGAP39Q9C0H5 1083 aa9.28□□□□□ -0.92
USP4-210ENST00000483212 NUP62CLQ9H1M0 184 aa9.28□□□□□ -0.92
USP4-210ENST00000483212 BCAS3Q9H6U6 928 aa9.28□□□□□ -0.92
USP4-210ENST00000483212 DISC1Q9NRI5 854 aa9.28□□□□□ -0.92
USP4-210ENST00000483212 TBC1D22BQ9NU19 505 aa9.28□□□□□ -0.92
USP4-210ENST00000483212 SERTAD1Q9UHV2 236 aa9.28□□□□□ -0.92
USP4-210ENST00000483212 ZNFX1Q9P2E3 1918 aaKnown RBP9.28□□□□□ -0.92
USP4-210ENST00000483212 MGAMO43451 1857 aa9.28□□□□□ -0.92
USP4-210ENST00000483212 B4DLN1 442 aa9.27□□□□□ -0.93
USP4-210ENST00000483212 FOXN1O15353 648 aa9.27□□□□□ -0.93
USP4-210ENST00000483212 MARCH6O60337 910 aa9.27□□□□□ -0.93
USP4-210ENST00000483212 GAS7O60861 476 aa9.27□□□□□ -0.93
USP4-210ENST00000483212 KINO60870 393 aaKnown RBP9.27□□□□□ -0.93
USP4-210ENST00000483212 SNAI1O95863 264 aaPredicted RBP9.27□□□□□ -0.93
USP4-210ENST00000483212 SLFN14P0C7P3 912 aa9.27□□□□□ -0.93
USP4-210ENST00000483212 HSPA6P17066 643 aa9.27□□□□□ -0.93
USP4-210ENST00000483212 PLCG1P19174 1290 aa9.27□□□□□ -0.93
USP4-210ENST00000483212 UBA1P22314 1058 aaKnown RBP9.27□□□□□ -0.93
USP4-210ENST00000483212 TXLNAP40222 546 aa9.27□□□□□ -0.93
USP4-210ENST00000483212 UBA7P41226 1012 aa9.27□□□□□ -0.93
USP4-210ENST00000483212 ZNF445P59923 1031 aa9.27□□□□□ -0.93
USP4-210ENST00000483212 NCAPH2Q6IBW4 605 aa9.27□□□□□ -0.93
USP4-210ENST00000483212 TAPT1Q6NXT6 567 aa9.27□□□□□ -0.93
USP4-210ENST00000483212 CCDC62Q6P9F0 684 aa9.27□□□□□ -0.93
USP4-210ENST00000483212 KCNK18Q7Z418 384 aa9.27□□□□□ -0.93
USP4-210ENST00000483212 FBXO16Q8IX29 292 aaPredicted RBP9.27□□□□□ -0.93
USP4-210ENST00000483212 MSL3Q8N5Y2 521 aaKnown RBP9.27□□□□□ -0.93
USP4-210ENST00000483212 SNX29Q8TEQ0 813 aa9.27□□□□□ -0.93
USP4-210ENST00000483212 SOCS4Q8WXH5 440 aa9.27□□□□□ -0.93
USP4-210ENST00000483212 SYAP1Q96A49 352 aaPredicted RBP9.27□□□□□ -0.93
USP4-210ENST00000483212 DHX58Q96C10 678 aa9.27□□□□□ -0.93
USP4-210ENST00000483212 CDHR1Q96JP9 859 aa9.27□□□□□ -0.93
USP4-210ENST00000483212 TRIM47Q96LD4 638 aa9.27□□□□□ -0.93
USP4-210ENST00000483212 HSD17B14Q9BPX1 270 aa9.27□□□□□ -0.93
USP4-210ENST00000483212 EIF2AK1Q9BQI3 630 aaKnown RBP9.27□□□□□ -0.93
USP4-210ENST00000483212 PYM1Q9BRP8 204 aaKnown RBP9.27□□□□□ -0.93
USP4-210ENST00000483212 FUCA2Q9BTY2 467 aa9.27□□□□□ -0.93
USP4-210ENST00000483212 POLR3CQ9BUI4 534 aaPredicted RBP9.27□□□□□ -0.93
USP4-210ENST00000483212 PANK2Q9BZ23 570 aa9.27□□□□□ -0.93
USP4-210ENST00000483212 BLOC1S4Q9NUP1 217 aa9.27□□□□□ -0.93
USP4-210ENST00000483212 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.27□□□□□ -0.93
USP4-210ENST00000483212 FLRT1Q9NZU1 646 aa9.27□□□□□ -0.93
USP4-210ENST00000483212 PKD2L1Q9P0L9 805 aa9.27□□□□□ -0.93
USP4-210ENST00000483212 USP25Q9UHP3 1055 aa9.27□□□□□ -0.93
USP4-210ENST00000483212 TELO2Q9Y4R8 837 aa9.27□□□□□ -0.93
USP4-210ENST00000483212 SYNGAP1Q96PV0 1343 aa9.27□□□□□ -0.93
USP4-210ENST00000483212 KIAA1217Q5T5P2 1943 aa9.27□□□□□ -0.93
USP4-210ENST00000483212 POTEB3A0JP26 581 aa9.26□□□□□ -0.93
USP4-210ENST00000483212 DDX39AO00148 427 aaKnown RBP9.26□□□□□ -0.93
USP4-210ENST00000483212 TNPO2O14787 897 aaKnown RBP9.26□□□□□ -0.93
USP4-210ENST00000483212 TRPA1O75762 1119 aa9.26□□□□□ -0.93
USP4-210ENST00000483212 PRR29P0C7W0 189 aa9.26□□□□□ -0.93
USP4-210ENST00000483212 TGFB3P10600 412 aa9.26□□□□□ -0.93
USP4-210ENST00000483212 RPA1P27694 616 aa9.26□□□□□ -0.93
USP4-210ENST00000483212 PSMC4P43686 418 aa9.26□□□□□ -0.93
USP4-210ENST00000483212 FCGRTP55899 365 aa9.26□□□□□ -0.93
USP4-210ENST00000483212 KRT76Q01546 638 aa9.26□□□□□ -0.93
USP4-210ENST00000483212 EPHA7Q15375 998 aa9.26□□□□□ -0.93
USP4-210ENST00000483212 CAMK4Q16566 473 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms