RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 JADE2Q9NQC1 790 aa15.88■□□□□ 0.13
VARS-225ENST00000482996 HDAC6Q9UBN7 1215 aa15.88■□□□□ 0.13
VARS-225ENST00000482996 GTF2IRD1Q9UHL9 959 aa15.88■□□□□ 0.13
VARS-225ENST00000482996 UBIAD1Q9Y5Z9 338 aa15.88■□□□□ 0.13
VARS-225ENST00000482996 ESYT2A0FGR8 921 aa15.87■□□□□ 0.13
VARS-225ENST00000482996 CPLX1O14810 134 aa15.87■□□□□ 0.13
VARS-225ENST00000482996 FGBP02675 491 aa15.87■□□□□ 0.13
VARS-225ENST00000482996 LGALS2P05162 132 aa15.87■□□□□ 0.13
VARS-225ENST00000482996 ITGB5P18084 799 aa15.87■□□□□ 0.13
VARS-225ENST00000482996 NTRK3Q16288 839 aa15.87■□□□□ 0.13
VARS-225ENST00000482996 MCTP2Q6DN12 878 aa15.87■□□□□ 0.13
VARS-225ENST00000482996 FAM109BQ6ICB4 259 aaPredicted RBP15.87■□□□□ 0.13
VARS-225ENST00000482996 CPLX2Q6PUV4 134 aaKnown RBP15.87■□□□□ 0.13
VARS-225ENST00000482996 C16orf59Q7L2K0 433 aa15.87■□□□□ 0.13
VARS-225ENST00000482996 TRIM22Q8IYM9 498 aa15.87■□□□□ 0.13
VARS-225ENST00000482996 CAGE1Q8TC20 777 aa15.87■□□□□ 0.13
VARS-225ENST00000482996 GPR20Q99678 358 aa15.87■□□□□ 0.13
VARS-225ENST00000482996 BCAS3Q9H6U6 928 aa15.87■□□□□ 0.13
VARS-225ENST00000482996 NCOA5Q9HCD5 579 aaKnown RBP15.87■□□□□ 0.13
VARS-225ENST00000482996 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.86■□□□□ 0.13
VARS-225ENST00000482996 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.86■□□□□ 0.13
VARS-225ENST00000482996 H3BRB1 525 aa15.86■□□□□ 0.13
VARS-225ENST00000482996 PFKMP08237 780 aa15.86■□□□□ 0.13
VARS-225ENST00000482996 GNA11P29992 359 aa15.86■□□□□ 0.13
VARS-225ENST00000482996 RFC2P35250 354 aa15.86■□□□□ 0.13
VARS-225ENST00000482996 SP4Q02446 784 aa15.86■□□□□ 0.13
VARS-225ENST00000482996 PKN1Q16512 942 aa15.86■□□□□ 0.13
VARS-225ENST00000482996 CCDC148Q8NFR7 591 aa15.86■□□□□ 0.13
VARS-225ENST00000482996 BICD2Q8TD16 824 aa15.86■□□□□ 0.13
VARS-225ENST00000482996 SCLYQ96I15 445 aa15.86■□□□□ 0.13
VARS-225ENST00000482996 PGBD1Q96JS3 809 aa15.86■□□□□ 0.13
VARS-225ENST00000482996 MXRA8Q9BRK3 442 aa15.86■□□□□ 0.13
VARS-225ENST00000482996 C16orf70Q9BSU1 422 aa15.86■□□□□ 0.13
VARS-225ENST00000482996 ZMYND12Q9H0C1 365 aa15.86■□□□□ 0.13
VARS-225ENST00000482996 TUT1Q9H6E5 874 aaKnown RBP15.86■□□□□ 0.13
VARS-225ENST00000482996 ZNF215Q9UL58 517 aaPredicted RBP15.86■□□□□ 0.13
VARS-225ENST00000482996 KCNA2P16389 499 aa15.85■□□□□ 0.13
VARS-225ENST00000482996 ZNF76P36508 570 aa15.85■□□□□ 0.13
VARS-225ENST00000482996 SREBF1P36956 1147 aa15.85■□□□□ 0.13
VARS-225ENST00000482996 CLK2P49760 499 aaKnown RBP15.85■□□□□ 0.13
VARS-225ENST00000482996 SSRP1Q08945 709 aaKnown RBP15.85■□□□□ 0.13
VARS-225ENST00000482996 CEP55Q53EZ4 464 aa15.85■□□□□ 0.13
VARS-225ENST00000482996 UTP14CQ5TAP6 766 aaKnown RBP15.85■□□□□ 0.13
VARS-225ENST00000482996 ZNF697Q5TEC3 545 aa15.85■□□□□ 0.13
VARS-225ENST00000482996 JAKMIP3Q5VZ66 844 aa15.85■□□□□ 0.13
VARS-225ENST00000482996 Q7L0L9 218 aa15.85■□□□□ 0.13
VARS-225ENST00000482996 REXO1Q8N1G1 1221 aaKnown RBP15.85■□□□□ 0.13
VARS-225ENST00000482996 AFAP1L1Q8TED9 768 aa15.85■□□□□ 0.13
VARS-225ENST00000482996 HERVK_113Q902F9 699 aa15.85■□□□□ 0.13
VARS-225ENST00000482996 TMEM260Q9NX78 707 aa15.85■□□□□ 0.13
VARS-225ENST00000482996 PKD2L1Q9P0L9 805 aa15.85■□□□□ 0.13
VARS-225ENST00000482996 C17orf102A2RUQ5 167 aa15.84■□□□□ 0.13
VARS-225ENST00000482996 ATP9AO75110 1047 aa15.84■□□□□ 0.13
VARS-225ENST00000482996 PPFIA3O75145 1194 aa15.84■□□□□ 0.13
VARS-225ENST00000482996 IQCF3P0C7M6 154 aa15.84■□□□□ 0.13
VARS-225ENST00000482996 ARHGAP4P98171 946 aa15.84■□□□□ 0.13
VARS-225ENST00000482996 STK3Q13188 491 aa15.84■□□□□ 0.13
VARS-225ENST00000482996 PTK7Q13308 1070 aa15.84■□□□□ 0.13
VARS-225ENST00000482996 RASIP1Q5U651 963 aa15.84■□□□□ 0.13
VARS-225ENST00000482996 SEPT1Q8WYJ6 367 aa15.84■□□□□ 0.13
VARS-225ENST00000482996 LARP6Q9BRS8 491 aaKnown RBP15.84■□□□□ 0.13
VARS-225ENST00000482996 KCNH7Q9NS40 1196 aa15.84■□□□□ 0.13
VARS-225ENST00000482996 PARNO95453 639 aaKnown RBP15.83■□□□□ 0.12
VARS-225ENST00000482996 SMIM10L2AP0DMW4 78 aa15.83■□□□□ 0.12
VARS-225ENST00000482996 SMIM10L2BP0DMW5 78 aa15.83■□□□□ 0.12
VARS-225ENST00000482996 GNAT1P11488 350 aa15.83■□□□□ 0.12
VARS-225ENST00000482996 ACTN1P12814 892 aa15.83■□□□□ 0.12
VARS-225ENST00000482996 SELPP16109 830 aa15.83■□□□□ 0.12
VARS-225ENST00000482996 ANKRD1Q15327 319 aa15.83■□□□□ 0.12
VARS-225ENST00000482996 OTOP2Q7RTS6 562 aa15.83■□□□□ 0.12
VARS-225ENST00000482996 DEFB128Q7Z7B8 93 aa15.83■□□□□ 0.12
VARS-225ENST00000482996 CTAGE1Q96RT6 745 aa15.83■□□□□ 0.12
VARS-225ENST00000482996 SDF4Q9BRK5 362 aa15.83■□□□□ 0.12
VARS-225ENST00000482996 FTOQ9C0B1 505 aaKnown RBP eCLIP15.83■□□□□ 0.12
VARS-225ENST00000482996 JPH1Q9HDC5 661 aaPredicted RBP15.83■□□□□ 0.12
VARS-225ENST00000482996 SH3GLB2Q9NR46 395 aa15.83■□□□□ 0.12
VARS-225ENST00000482996 MTMR10Q9NXD2 777 aa15.83■□□□□ 0.12
VARS-225ENST00000482996 ZBBXA8MT70 800 aa15.82■□□□□ 0.12
VARS-225ENST00000482996 MEIS1O00470 390 aa15.82■□□□□ 0.12
VARS-225ENST00000482996 CDKL5O76039 1030 aa15.82■□□□□ 0.12
VARS-225ENST00000482996 DEXIO95424 95 aa15.82■□□□□ 0.12
VARS-225ENST00000482996 TCF7P36402 384 aaPredicted RBP15.82■□□□□ 0.12
VARS-225ENST00000482996 ZNF200P98182 395 aaPredicted RBP15.82■□□□□ 0.12
VARS-225ENST00000482996 RBL2Q08999 1139 aa15.82■□□□□ 0.12
VARS-225ENST00000482996 LRRC8DQ7L1W4 858 aa15.82■□□□□ 0.12
VARS-225ENST00000482996 NIPA1Q7RTP0 329 aa15.82■□□□□ 0.12
VARS-225ENST00000482996 TRIM50Q86XT4 487 aa15.82■□□□□ 0.12
VARS-225ENST00000482996 CYP2W1Q8TAV3 490 aa15.82■□□□□ 0.12
VARS-225ENST00000482996 DHX38Q92620 1227 aaKnown RBP15.82■□□□□ 0.12
VARS-225ENST00000482996 ATP6V0A1Q93050 837 aa15.82■□□□□ 0.12
VARS-225ENST00000482996 SLKQ9H2G2 1235 aaPredicted RBP15.82■□□□□ 0.12
VARS-225ENST00000482996 VPS54Q9P1Q0 977 aa15.82■□□□□ 0.12
VARS-225ENST00000482996 SLC9A2Q9UBY0 812 aa15.82■□□□□ 0.12
VARS-225ENST00000482996 SLC4A7Q9Y6M7 1214 aa15.82■□□□□ 0.12
VARS-225ENST00000482996 TMEM265A0A087WTH1 108 aa15.81■□□□□ 0.12
VARS-225ENST00000482996 NFASCO94856 1347 aa15.81■□□□□ 0.12
VARS-225ENST00000482996 CYP3A4P08684 503 aa15.81■□□□□ 0.12
VARS-225ENST00000482996 ARP10275 920 aa15.81■□□□□ 0.12
VARS-225ENST00000482996 CKBP12277 381 aa15.81■□□□□ 0.12
VARS-225ENST00000482996 NLRP5P59047 1200 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms