RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 NFASCO94856 1347 aa18.87■□□□□ 0.61
HMGN1-214ENST00000482733 FAM86B2P0C5J1 330 aa18.87■□□□□ 0.61
HMGN1-214ENST00000482733 KRT2P35908 639 aa18.87■□□□□ 0.61
HMGN1-214ENST00000482733 PLA2G4DQ86XP0 818 aa18.87■□□□□ 0.61
HMGN1-214ENST00000482733 FAM184AQ8NB25 1140 aa18.87■□□□□ 0.61
HMGN1-214ENST00000482733 TBCKQ8TEA7 893 aa18.87■□□□□ 0.61
HMGN1-214ENST00000482733 SDF4Q9BRK5 362 aa18.87■□□□□ 0.61
HMGN1-214ENST00000482733 AGO4Q9HCK5 861 aaKnown RBP18.87■□□□□ 0.61
HMGN1-214ENST00000482733 KIF3AQ9Y496 699 aa18.87■□□□□ 0.61
HMGN1-214ENST00000482733 GRIN2DO15399 1336 aa18.86■□□□□ 0.61
HMGN1-214ENST00000482733 CLTBP09497 229 aa18.86■□□□□ 0.61
HMGN1-214ENST00000482733 ARP10275 920 aa18.86■□□□□ 0.61
HMGN1-214ENST00000482733 PSMC6P62333 389 aa18.86■□□□□ 0.61
HMGN1-214ENST00000482733 PTPN11Q06124 597 aaPredicted RBP18.86■□□□□ 0.61
HMGN1-214ENST00000482733 NFRKBQ6P4R8 1299 aa18.86■□□□□ 0.61
HMGN1-214ENST00000482733 GPR20Q99678 358 aa18.86■□□□□ 0.61
HMGN1-214ENST00000482733 GJB4Q9NTQ9 266 aa18.86■□□□□ 0.61
HMGN1-214ENST00000482733 PDE4DIPQ5VU43 2346 aa18.86■□□□□ 0.61
HMGN1-214ENST00000482733 DNAH12Q6ZR08 3092 aa18.86■□□□□ 0.61
HMGN1-214ENST00000482733 IGLV3-22A0A075B6J6 115 aa18.85■□□□□ 0.61
HMGN1-214ENST00000482733 CD2BP2O95400 341 aaKnown RBP18.85■□□□□ 0.61
HMGN1-214ENST00000482733 F2P00734 622 aa18.85■□□□□ 0.61
HMGN1-214ENST00000482733 MMP1P03956 469 aa18.85■□□□□ 0.61
HMGN1-214ENST00000482733 SAFBQ15424 915 aaKnown RBP eCLIP18.85■□□□□ 0.61
HMGN1-214ENST00000482733 NBPF20Q3BBV1 942 aa18.85■□□□□ 0.61
HMGN1-214ENST00000482733 KRT40Q6A162 431 aa18.85■□□□□ 0.61
HMGN1-214ENST00000482733 MOXD1Q6UVY6 613 aa18.85■□□□□ 0.61
HMGN1-214ENST00000482733 FAM126BQ8IXS8 530 aa18.85■□□□□ 0.61
HMGN1-214ENST00000482733 SEPT1Q8WYJ6 367 aa18.85■□□□□ 0.61
HMGN1-214ENST00000482733 C8orf76Q96K31 380 aa18.85■□□□□ 0.61
HMGN1-214ENST00000482733 BCAS3Q9H6U6 928 aa18.85■□□□□ 0.61
HMGN1-214ENST00000482733 JPH1Q9HDC5 661 aaPredicted RBP18.85■□□□□ 0.61
HMGN1-214ENST00000482733 PKD2L1Q9P0L9 805 aa18.85■□□□□ 0.61
HMGN1-214ENST00000482733 ZMYND8Q9ULU4 1186 aaPredicted RBP18.85■□□□□ 0.61
HMGN1-214ENST00000482733 CYP3A7-CYP3A51PA0A087WV96 503 aa18.84■□□□□ 0.61
HMGN1-214ENST00000482733 CYP3A7P24462 503 aa18.84■□□□□ 0.61
HMGN1-214ENST00000482733 FAAP100Q0VG06 881 aa18.84■□□□□ 0.61
HMGN1-214ENST00000482733 PRR16Q569H4 304 aa18.84■□□□□ 0.61
HMGN1-214ENST00000482733 OXER1Q8TDS5 423 aa18.84■□□□□ 0.61
HMGN1-214ENST00000482733 KAT2BQ92831 832 aa18.84■□□□□ 0.61
HMGN1-214ENST00000482733 NAP1L4Q99733 375 aaKnown RBP18.84■□□□□ 0.61
HMGN1-214ENST00000482733 ZNF577Q9BSK1 485 aa18.84■□□□□ 0.61
HMGN1-214ENST00000482733 PRDM5Q9NQX1 630 aaPredicted RBP18.84■□□□□ 0.61
HMGN1-214ENST00000482733 PDLIM7Q9NR12 457 aa18.84■□□□□ 0.61
HMGN1-214ENST00000482733 TBC1D22BQ9NU19 505 aa18.84■□□□□ 0.61
HMGN1-214ENST00000482733 TMEM39AQ9NV64 488 aa18.84■□□□□ 0.61
HMGN1-214ENST00000482733 SLC9A2Q9UBY0 812 aa18.84■□□□□ 0.61
HMGN1-214ENST00000482733 IPO5O00410 1097 aaKnown RBP18.83■□□□□ 0.6
HMGN1-214ENST00000482733 KIAA0355O15063 1070 aa18.83■□□□□ 0.6
HMGN1-214ENST00000482733 LGALS2P05162 132 aa18.83■□□□□ 0.6
HMGN1-214ENST00000482733 SUPT20HL2P0C7V6 817 aa18.83■□□□□ 0.6
HMGN1-214ENST00000482733 PSEN2P49810 448 aa18.83■□□□□ 0.6
HMGN1-214ENST00000482733 SP4Q02446 784 aa18.83■□□□□ 0.6
HMGN1-214ENST00000482733 ITGB3BPQ13352 177 aaPredicted RBP18.83■□□□□ 0.6
HMGN1-214ENST00000482733 MFSD10Q14728 455 aa18.83■□□□□ 0.6
HMGN1-214ENST00000482733 Q4G0T1 1027 aa18.83■□□□□ 0.6
HMGN1-214ENST00000482733 FAM47CQ5HY64 1035 aa18.83■□□□□ 0.6
HMGN1-214ENST00000482733 PIK3AP1Q6ZUJ8 805 aa18.83■□□□□ 0.6
HMGN1-214ENST00000482733 NEK8Q86SG6 692 aa18.83■□□□□ 0.6
HMGN1-214ENST00000482733 SESTD1Q86VW0 696 aa18.83■□□□□ 0.6
HMGN1-214ENST00000482733 DIS3L2Q8IYB7 885 aaKnown RBP18.83■□□□□ 0.6
HMGN1-214ENST00000482733 C16orf70Q9BSU1 422 aa18.83■□□□□ 0.6
HMGN1-214ENST00000482733 ZNF215Q9UL58 517 aaPredicted RBP18.83■□□□□ 0.6
HMGN1-214ENST00000482733 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.83■□□□□ 0.6
HMGN1-214ENST00000482733 HAS3O00219 553 aa18.82■□□□□ 0.6
HMGN1-214ENST00000482733 EDIL3O43854 480 aa18.82■□□□□ 0.6
HMGN1-214ENST00000482733 CD4P01730 458 aa18.82■□□□□ 0.6
HMGN1-214ENST00000482733 ZNF286BP0CG31 522 aa18.82■□□□□ 0.6
HMGN1-214ENST00000482733 SYN1P17600 705 aa18.82■□□□□ 0.6
HMGN1-214ENST00000482733 INF2Q27J81 1249 aa18.82■□□□□ 0.6
HMGN1-214ENST00000482733 KIAA0753Q2KHM9 967 aa18.82■□□□□ 0.6
HMGN1-214ENST00000482733 C7orf31Q8N865 590 aa18.82■□□□□ 0.6
HMGN1-214ENST00000482733 FBXO18Q8NFZ0 1043 aa18.82■□□□□ 0.6
HMGN1-214ENST00000482733 LENG9Q96B70 501 aa18.82■□□□□ 0.6
HMGN1-214ENST00000482733 LBHD1Q9BQE6 289 aaPredicted RBP18.82■□□□□ 0.6
HMGN1-214ENST00000482733 TCEAL9Q9UHQ7 104 aa18.82■□□□□ 0.6
HMGN1-214ENST00000482733 ALPK3Q96L96 1907 aa18.81■□□□□ 0.6
HMGN1-214ENST00000482733 GSTTP1A0A1W2PQM5 241 aa18.81■□□□□ 0.6
HMGN1-214ENST00000482733 BTBD18B2RXH4 712 aa18.81■□□□□ 0.6
HMGN1-214ENST00000482733 H3BRB1 525 aa18.81■□□□□ 0.6
HMGN1-214ENST00000482733 GCFC2P16383 781 aaKnown RBP18.81■□□□□ 0.6
HMGN1-214ENST00000482733 TCF7P36402 384 aaPredicted RBP18.81■□□□□ 0.6
HMGN1-214ENST00000482733 FOSBP53539 338 aa18.81■□□□□ 0.6
HMGN1-214ENST00000482733 CHMP4BP1P59074 171 aa18.81■□□□□ 0.6
HMGN1-214ENST00000482733 NR5A1Q13285 461 aa18.81■□□□□ 0.6
HMGN1-214ENST00000482733 LETM2Q2VYF4 491 aa18.81■□□□□ 0.6
HMGN1-214ENST00000482733 PPP4R3AQ6IN85 833 aa18.81■□□□□ 0.6
HMGN1-214ENST00000482733 TNFRSF25Q93038 417 aa18.81■□□□□ 0.6
HMGN1-214ENST00000482733 MBOAT7Q96N66 472 aa18.81■□□□□ 0.6
HMGN1-214ENST00000482733 TUT1Q9H6E5 874 aaKnown RBP18.81■□□□□ 0.6
HMGN1-214ENST00000482733 TBX21Q9UL17 535 aa18.81■□□□□ 0.6
HMGN1-214ENST00000482733 TRIM43BA6NCK2 446 aa18.8■□□□□ 0.6
HMGN1-214ENST00000482733 DHX15O43143 795 aaKnown RBP18.8■□□□□ 0.6
HMGN1-214ENST00000482733 B4GALT4O60513 344 aa18.8■□□□□ 0.6
HMGN1-214ENST00000482733 ACTR2P61160 394 aa18.8■□□□□ 0.6
HMGN1-214ENST00000482733 UTP14CQ5TAP6 766 aaKnown RBP18.8■□□□□ 0.6
HMGN1-214ENST00000482733 SH3RF1Q7Z6J0 888 aa18.8■□□□□ 0.6
HMGN1-214ENST00000482733 TRIM43Q96BQ3 446 aaPredicted RBP18.8■□□□□ 0.6
HMGN1-214ENST00000482733 RIT2Q99578 217 aa18.8■□□□□ 0.6
HMGN1-214ENST00000482733 TRPV6Q9H1D0 765 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms