RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 TMEM201Q5SNT2 666 aa8.36□□□□□ -1.07
CLK1-212ENST00000482590 SULT6B1Q6IMI4 303 aa8.36□□□□□ -1.07
CLK1-212ENST00000482590 APBB1IPQ7Z5R6 666 aaPredicted RBP8.36□□□□□ -1.07
CLK1-212ENST00000482590 ZNF605Q86T29 641 aa8.36□□□□□ -1.07
CLK1-212ENST00000482590 RNF34Q969K3 372 aa8.36□□□□□ -1.07
CLK1-212ENST00000482590 OSBPL2Q9H1P3 480 aa8.36□□□□□ -1.07
CLK1-212ENST00000482590 YBX2Q9Y2T7 364 aaKnown RBP8.36□□□□□ -1.07
CLK1-212ENST00000482590 COL4A3BPQ9Y5P4 624 aa8.36□□□□□ -1.07
CLK1-212ENST00000482590 DICER1Q9UPY3 1922 aaKnown RBP8.36□□□□□ -1.07
CLK1-212ENST00000482590 ARFGEF2Q9Y6D5 1785 aa8.35□□□□□ -1.07
CLK1-212ENST00000482590 ANKRD31Q8N7Z5 1873 aa8.35□□□□□ -1.07
CLK1-212ENST00000482590 RPS6KA4O75676 772 aa8.35□□□□□ -1.07
CLK1-212ENST00000482590 YARSP54577 528 aaKnown RBP8.35□□□□□ -1.07
CLK1-212ENST00000482590 BNC2Q6ZN30 1099 aaPredicted RBP8.35□□□□□ -1.07
CLK1-212ENST00000482590 INTS4Q96HW7 963 aaKnown RBP8.35□□□□□ -1.07
CLK1-212ENST00000482590 NOC4LQ9BVI4 516 aaKnown RBP8.35□□□□□ -1.07
CLK1-212ENST00000482590 KCPQ6ZWJ8 1503 aa8.34□□□□□ -1.07
CLK1-212ENST00000482590 PEX10O60683 326 aa8.34□□□□□ -1.07
CLK1-212ENST00000482590 CILPO75339 1184 aa8.34□□□□□ -1.07
CLK1-212ENST00000482590 GYS1P13807 737 aa8.34□□□□□ -1.07
CLK1-212ENST00000482590 HOXA5P20719 270 aa8.34□□□□□ -1.07
CLK1-212ENST00000482590 CRKLP46109 303 aaKnown RBP8.34□□□□□ -1.07
CLK1-212ENST00000482590 CTSWP56202 376 aa8.34□□□□□ -1.07
CLK1-212ENST00000482590 TGFB2P61812 414 aa8.34□□□□□ -1.07
CLK1-212ENST00000482590 PLEKHG6Q3KR16 790 aa8.34□□□□□ -1.07
CLK1-212ENST00000482590 CCDC84Q86UT8 332 aaPredicted RBP8.34□□□□□ -1.07
CLK1-212ENST00000482590 SLFN12Q8IYM2 578 aa8.34□□□□□ -1.07
CLK1-212ENST00000482590 BAHD1Q8TBE0 780 aaPredicted RBP8.34□□□□□ -1.07
CLK1-212ENST00000482590 PMM1Q92871 262 aa8.34□□□□□ -1.07
CLK1-212ENST00000482590 C20orf173Q96LM9 149 aa8.34□□□□□ -1.07
CLK1-212ENST00000482590 KRTAP9-3Q9BYQ3 159 aa8.34□□□□□ -1.07
CLK1-212ENST00000482590 ACBD3Q9H3P7 528 aa8.34□□□□□ -1.07
CLK1-212ENST00000482590 ZNF552Q9H707 407 aaPredicted RBP8.34□□□□□ -1.07
CLK1-212ENST00000482590 COL11A2P13942 1736 aaPredicted RBP8.34□□□□□ -1.07
CLK1-212ENST00000482590 USP42Q9H9J4 1324 aaKnown RBP8.33□□□□□ -1.08
CLK1-212ENST00000482590 LAMB4A4D0S4 1761 aa8.33□□□□□ -1.08
CLK1-212ENST00000482590 DLG5Q8TDM6 1919 aa8.33□□□□□ -1.08
CLK1-212ENST00000482590 SHISA3A0PJX4 238 aa8.33□□□□□ -1.08
CLK1-212ENST00000482590 FAM221AA4D161 298 aa8.33□□□□□ -1.08
CLK1-212ENST00000482590 U2SURPO15042 1029 aaKnown RBP8.33□□□□□ -1.08
CLK1-212ENST00000482590 SEMA7AO75326 666 aa8.33□□□□□ -1.08
CLK1-212ENST00000482590 DNAJA1P31689 397 aaKnown RBP8.33□□□□□ -1.08
CLK1-212ENST00000482590 ST13P50502 369 aaKnown RBP8.33□□□□□ -1.08
CLK1-212ENST00000482590 TEKQ02763 1124 aa8.33□□□□□ -1.08
CLK1-212ENST00000482590 TAF1CQ15572 869 aaPredicted RBP8.33□□□□□ -1.08
CLK1-212ENST00000482590 SHISA4Q96DD7 197 aa8.33□□□□□ -1.08
CLK1-212ENST00000482590 KREMEN1Q96MU8 473 aa8.33□□□□□ -1.08
CLK1-212ENST00000482590 PCDH12Q9NPG4 1184 aa8.33□□□□□ -1.08
CLK1-212ENST00000482590 COL15A1P39059 1388 aa8.33□□□□□ -1.08
CLK1-212ENST00000482590 A0A0G2JLW4 131 aa8.32□□□□□ -1.08
CLK1-212ENST00000482590 DPEP1P16444 411 aa8.32□□□□□ -1.08
CLK1-212ENST00000482590 HSPA6P17066 643 aa8.32□□□□□ -1.08
CLK1-212ENST00000482590 IL13P35225 146 aa8.32□□□□□ -1.08
CLK1-212ENST00000482590 SPPL2CQ8IUH8 684 aa8.32□□□□□ -1.08
CLK1-212ENST00000482590 GCM1Q9NP62 436 aa8.32□□□□□ -1.08
CLK1-212ENST00000482590 GPR160Q9UJ42 338 aa8.32□□□□□ -1.08
CLK1-212ENST00000482590 FER1L6Q2WGJ9 1857 aa8.32□□□□□ -1.08
CLK1-212ENST00000482590 KIF7Q2M1P5 1343 aa8.31□□□□□ -1.08
CLK1-212ENST00000482590 TEX51A0A1B0GUA7 166 aa8.31□□□□□ -1.08
CLK1-212ENST00000482590 CHURC1-FNTBB4DL54 471 aa8.31□□□□□ -1.08
CLK1-212ENST00000482590 F6X3S4 739 aa8.31□□□□□ -1.08
CLK1-212ENST00000482590 CREB3O43889 395 aa8.31□□□□□ -1.08
CLK1-212ENST00000482590 PSPNO60542 156 aa8.31□□□□□ -1.08
CLK1-212ENST00000482590 BPNT1O95861 308 aa8.31□□□□□ -1.08
CLK1-212ENST00000482590 HMOX1P09601 288 aa8.31□□□□□ -1.08
CLK1-212ENST00000482590 TNNI2P48788 182 aa8.31□□□□□ -1.08
CLK1-212ENST00000482590 GALK1P51570 392 aa8.31□□□□□ -1.08
CLK1-212ENST00000482590 ARID5AQ03989 594 aa8.31□□□□□ -1.08
CLK1-212ENST00000482590 CHRNEQ04844 493 aa8.31□□□□□ -1.08
CLK1-212ENST00000482590 CAMK2GQ13555 558 aaPredicted RBP8.31□□□□□ -1.08
CLK1-212ENST00000482590 CCAR1Q8IX12 1150 aaKnown RBP8.31□□□□□ -1.08
CLK1-212ENST00000482590 LINC01599Q8WXQ3 324 aa8.31□□□□□ -1.08
CLK1-212ENST00000482590 SLC52A2Q9HAB3 445 aa8.31□□□□□ -1.08
CLK1-212ENST00000482590 IFT57Q9NWB7 429 aa8.31□□□□□ -1.08
CLK1-212ENST00000482590 PARP2Q9UGN5 583 aa8.31□□□□□ -1.08
CLK1-212ENST00000482590 SRP68Q9UHB9 627 aaKnown RBP8.31□□□□□ -1.08
CLK1-212ENST00000482590 ZNF281Q9Y2X9 895 aa8.31□□□□□ -1.08
CLK1-212ENST00000482590 COL3A1P02461 1466 aaPredicted RBP8.31□□□□□ -1.08
CLK1-212ENST00000482590 NOTOA8MTQ0 251 aa8.3□□□□□ -1.08
CLK1-212ENST00000482590 DIAPH1O60610 1272 aaKnown RBP8.3□□□□□ -1.08
CLK1-212ENST00000482590 F13A1P00488 732 aa8.3□□□□□ -1.08
CLK1-212ENST00000482590 CTSHP09668 335 aa8.3□□□□□ -1.08
CLK1-212ENST00000482590 PDE6BP35913 854 aa8.3□□□□□ -1.08
CLK1-212ENST00000482590 SNX17Q15036 470 aa8.3□□□□□ -1.08
CLK1-212ENST00000482590 DNAJC10Q8IXB1 793 aa8.3□□□□□ -1.08
CLK1-212ENST00000482590 TTC5Q8N0Z6 440 aa8.3□□□□□ -1.08
CLK1-212ENST00000482590 ANKS4BQ8N8V4 417 aa8.3□□□□□ -1.08
CLK1-212ENST00000482590 GATAD2BQ8WXI9 593 aa8.3□□□□□ -1.08
CLK1-212ENST00000482590 G6PC3Q9BUM1 346 aa8.3□□□□□ -1.08
CLK1-212ENST00000482590 SGPP1Q9BX95 441 aa8.3□□□□□ -1.08
CLK1-212ENST00000482590 ASPNQ9BXN1 380 aa8.3□□□□□ -1.08
CLK1-212ENST00000482590 PARD6AQ9NPB6 346 aa8.3□□□□□ -1.08
CLK1-212ENST00000482590 REV1Q9UBZ9 1251 aa8.3□□□□□ -1.08
CLK1-212ENST00000482590 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.3□□□□□ -1.08
CLK1-212ENST00000482590 SOS1Q07889 1333 aaPredicted RBP8.29□□□□□ -1.08
CLK1-212ENST00000482590 A0A0U1RQG5 324 aaPredicted RBP8.29□□□□□ -1.08
CLK1-212ENST00000482590 RNMTO43148 476 aaKnown RBP8.29□□□□□ -1.08
CLK1-212ENST00000482590 PF4P02776 101 aa8.29□□□□□ -1.08
CLK1-212ENST00000482590 ZNF76P36508 570 aa8.29□□□□□ -1.08
CLK1-212ENST00000482590 DAB2P98082 770 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms