RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 SMIM10L2BP0DMW5 78 aa12.02□□□□□ -0.49
CPSF4-212ENST00000482251 CKBP12277 381 aa12.02□□□□□ -0.49
CPSF4-212ENST00000482251 SELPP16109 830 aa12.02□□□□□ -0.49
CPSF4-212ENST00000482251 ATP2A2P16615 1042 aaKnown RBP12.02□□□□□ -0.49
CPSF4-212ENST00000482251 ICAM3P32942 547 aa12.02□□□□□ -0.49
CPSF4-212ENST00000482251 HSPA4P34932 840 aa12.02□□□□□ -0.49
CPSF4-212ENST00000482251 METAP2P50579 478 aaKnown RBP eCLIP12.02□□□□□ -0.49
CPSF4-212ENST00000482251 NEDD9Q14511 834 aa12.02□□□□□ -0.49
CPSF4-212ENST00000482251 RAB30Q15771 203 aa12.02□□□□□ -0.49
CPSF4-212ENST00000482251 TSGA10IPQ3SY00 556 aa12.02□□□□□ -0.49
CPSF4-212ENST00000482251 METTL7BQ6UX53 244 aa12.02□□□□□ -0.49
CPSF4-212ENST00000482251 NLRX1Q86UT6 975 aa12.02□□□□□ -0.49
CPSF4-212ENST00000482251 CAGE1Q8TC20 777 aa12.02□□□□□ -0.49
CPSF4-212ENST00000482251 AFAP1L1Q8TED9 768 aa12.02□□□□□ -0.49
CPSF4-212ENST00000482251 GPR20Q99678 358 aa12.02□□□□□ -0.49
CPSF4-212ENST00000482251 PRDM12Q9H4Q4 367 aa12.02□□□□□ -0.49
CPSF4-212ENST00000482251 PCDHA6Q9UN73 950 aa12.02□□□□□ -0.49
CPSF4-212ENST00000482251 PCDHA8Q9Y5H6 950 aa12.02□□□□□ -0.49
CPSF4-212ENST00000482251 V9GY48 417 aaPredicted RBP12.02□□□□□ -0.49
CPSF4-212ENST00000482251 PTPRSQ13332 1948 aa12.01□□□□□ -0.49
CPSF4-212ENST00000482251 PRUNE2Q8WUY3 3088 aa12.01□□□□□ -0.49
CPSF4-212ENST00000482251 H3BRB1 525 aa12.01□□□□□ -0.49
CPSF4-212ENST00000482251 STXBP3O00186 592 aa12.01□□□□□ -0.49
CPSF4-212ENST00000482251 ATP9AO75110 1047 aa12.01□□□□□ -0.49
CPSF4-212ENST00000482251 PPFIA4O75335 1185 aa12.01□□□□□ -0.49
CPSF4-212ENST00000482251 HMGB1P09429 215 aaKnown RBP12.01□□□□□ -0.49
CPSF4-212ENST00000482251 CTSHP09668 335 aa12.01□□□□□ -0.49
CPSF4-212ENST00000482251 ACTN1P12814 892 aa12.01□□□□□ -0.49
CPSF4-212ENST00000482251 ITGB5P18084 799 aa12.01□□□□□ -0.49
CPSF4-212ENST00000482251 RFC2P35250 354 aa12.01□□□□□ -0.49
CPSF4-212ENST00000482251 ADCY7P51828 1080 aa12.01□□□□□ -0.49
CPSF4-212ENST00000482251 FUT2Q10981 343 aa12.01□□□□□ -0.49
CPSF4-212ENST00000482251 MTMR1Q13613 665 aa12.01□□□□□ -0.49
CPSF4-212ENST00000482251 TCTN1Q2MV58 587 aa12.01□□□□□ -0.49
CPSF4-212ENST00000482251 ZNF618Q5T7W0 954 aa12.01□□□□□ -0.49
CPSF4-212ENST00000482251 PPP2R2DQ66LE6 453 aa12.01□□□□□ -0.49
CPSF4-212ENST00000482251 BLOC1S2Q6QNY1 142 aa12.01□□□□□ -0.49
CPSF4-212ENST00000482251 TMCO2Q7Z6W1 182 aaPredicted RBP12.01□□□□□ -0.49
CPSF4-212ENST00000482251 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.01□□□□□ -0.49
CPSF4-212ENST00000482251 TUT1Q9H6E5 874 aaKnown RBP12.01□□□□□ -0.49
CPSF4-212ENST00000482251 FAM217BQ9NTX9 383 aaPredicted RBP12.01□□□□□ -0.49
CPSF4-212ENST00000482251 TMEM260Q9NX78 707 aa12.01□□□□□ -0.49
CPSF4-212ENST00000482251 C17orf102A2RUQ5 167 aa12□□□□□ -0.49
CPSF4-212ENST00000482251 DLL1O00548 723 aa12□□□□□ -0.49
CPSF4-212ENST00000482251 NBNO60934 754 aa12□□□□□ -0.49
CPSF4-212ENST00000482251 REC8O95072 547 aa12□□□□□ -0.49
CPSF4-212ENST00000482251 KCNA2P16389 499 aa12□□□□□ -0.49
CPSF4-212ENST00000482251 RPS6KB1P23443 525 aa12□□□□□ -0.49
CPSF4-212ENST00000482251 MARK3P27448 753 aa12□□□□□ -0.49
CPSF4-212ENST00000482251 ADD1P35611 737 aaKnown RBP12□□□□□ -0.49
CPSF4-212ENST00000482251 TCF7P36402 384 aaPredicted RBP12□□□□□ -0.49
CPSF4-212ENST00000482251 THPOP40225 353 aa12□□□□□ -0.49
CPSF4-212ENST00000482251 PTK7Q13308 1070 aa12□□□□□ -0.49
CPSF4-212ENST00000482251 GPNMBQ14956 572 aa12□□□□□ -0.49
CPSF4-212ENST00000482251 TRIM71Q2Q1W2 868 aaKnown RBP12□□□□□ -0.49
CPSF4-212ENST00000482251 USP38Q8NB14 1042 aa12□□□□□ -0.49
CPSF4-212ENST00000482251 PPM1EQ8WY54 764 aa12□□□□□ -0.49
CPSF4-212ENST00000482251 ATP6V0A1Q93050 837 aa12□□□□□ -0.49
CPSF4-212ENST00000482251 GPRASP2Q96D09 838 aa12□□□□□ -0.49
CPSF4-212ENST00000482251 ANO3Q9BYT9 981 aa12□□□□□ -0.49
CPSF4-212ENST00000482251 SLC28A3Q9HAS3 691 aa12□□□□□ -0.49
CPSF4-212ENST00000482251 SMCO2A6NFE2 343 aa11.99□□□□□ -0.49
CPSF4-212ENST00000482251 TREHO43280 583 aa11.99□□□□□ -0.49
CPSF4-212ENST00000482251 ARHGEF15O94989 841 aa11.99□□□□□ -0.49
CPSF4-212ENST00000482251 CA3P07451 260 aa11.99□□□□□ -0.49
CPSF4-212ENST00000482251 DEFB103AP81534 67 aa11.99□□□□□ -0.49
CPSF4-212ENST00000482251 RBL2Q08999 1139 aa11.99□□□□□ -0.49
CPSF4-212ENST00000482251 MBTPS1Q14703 1052 aa11.99□□□□□ -0.49
CPSF4-212ENST00000482251 PPP1R18Q6NYC8 613 aa11.99□□□□□ -0.49
CPSF4-212ENST00000482251 XRRA1Q6P2D8 792 aa11.99□□□□□ -0.49
CPSF4-212ENST00000482251 TRAF7Q6Q0C0 670 aa11.99□□□□□ -0.49
CPSF4-212ENST00000482251 CYP2W1Q8TAV3 490 aa11.99□□□□□ -0.49
CPSF4-212ENST00000482251 KCNB2Q92953 911 aa11.99□□□□□ -0.49
CPSF4-212ENST00000482251 PHKBQ93100 1093 aa11.99□□□□□ -0.49
CPSF4-212ENST00000482251 UIMC1Q96RL1 719 aa11.99□□□□□ -0.49
CPSF4-212ENST00000482251 SLC9A7Q96T83 725 aa11.99□□□□□ -0.49
CPSF4-212ENST00000482251 GAS2L1Q99501 681 aaPredicted RBP11.99□□□□□ -0.49
CPSF4-212ENST00000482251 USP26Q9BXU7 913 aa11.99□□□□□ -0.49
CPSF4-212ENST00000482251 EHMT1Q9H9B1 1298 aa11.99□□□□□ -0.49
CPSF4-212ENST00000482251 CERS4Q9HA82 394 aa11.99□□□□□ -0.49
CPSF4-212ENST00000482251 RIC8AQ9NPQ8 531 aa11.99□□□□□ -0.49
CPSF4-212ENST00000482251 SETD4Q9NVD3 440 aa11.99□□□□□ -0.49
CPSF4-212ENST00000482251 BARHL2Q9NY43 387 aa11.99□□□□□ -0.49
CPSF4-212ENST00000482251 ZNF215Q9UL58 517 aaPredicted RBP11.99□□□□□ -0.49
CPSF4-212ENST00000482251 PCDHA11Q9Y5I1 949 aa11.99□□□□□ -0.49
CPSF4-212ENST00000482251 UBIAD1Q9Y5Z9 338 aa11.99□□□□□ -0.49
CPSF4-212ENST00000482251 CHD9Q3L8U1 2897 aa11.99□□□□□ -0.49
CPSF4-212ENST00000482251 CHD7Q9P2D1 2997 aa11.98□□□□□ -0.49
CPSF4-212ENST00000482251 ADAMTS3O15072 1205 aa11.98□□□□□ -0.49
CPSF4-212ENST00000482251 IGFBP4P22692 258 aa11.98□□□□□ -0.49
CPSF4-212ENST00000482251 KCNJ6P48051 423 aa11.98□□□□□ -0.49
CPSF4-212ENST00000482251 WDR5P61964 334 aaKnown RBP11.98□□□□□ -0.49
CPSF4-212ENST00000482251 CCT2P78371 535 aaKnown RBP11.98□□□□□ -0.49
CPSF4-212ENST00000482251 ARHGAP4P98171 946 aa11.98□□□□□ -0.49
CPSF4-212ENST00000482251 ADGRE1Q14246 886 aa11.98□□□□□ -0.49
CPSF4-212ENST00000482251 JAKMIP3Q5VZ66 844 aa11.98□□□□□ -0.49
CPSF4-212ENST00000482251 CNKSR3Q6P9H4 555 aa11.98□□□□□ -0.49
CPSF4-212ENST00000482251 SPRED2Q7Z698 418 aa11.98□□□□□ -0.49
CPSF4-212ENST00000482251 SERINC5Q86VE9 423 aa11.98□□□□□ -0.49
CPSF4-212ENST00000482251 HERC6Q8IVU3 1022 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms