RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 LGALS2P05162 132 aa13.59□□□□□ -0.23
HMGN1-213ENST00000482192 PFKMP08237 780 aa13.59□□□□□ -0.23
HMGN1-213ENST00000482192 ACRP10323 421 aa13.59□□□□□ -0.23
HMGN1-213ENST00000482192 CLK2P49760 499 aaKnown RBP13.59□□□□□ -0.23
HMGN1-213ENST00000482192 SMAD3P84022 425 aaKnown RBP13.59□□□□□ -0.23
HMGN1-213ENST00000482192 PKN1Q16512 942 aa13.59□□□□□ -0.23
HMGN1-213ENST00000482192 TMEM240Q5SV17 173 aa13.59□□□□□ -0.23
HMGN1-213ENST00000482192 GDF6Q6KF10 455 aaPredicted RBP13.59□□□□□ -0.23
HMGN1-213ENST00000482192 ZNF365Q70YC5 407 aa13.59□□□□□ -0.23
HMGN1-213ENST00000482192 TRIM22Q8IYM9 498 aa13.59□□□□□ -0.23
HMGN1-213ENST00000482192 RPUSD2Q8IZ73 545 aaKnown RBP13.59□□□□□ -0.23
HMGN1-213ENST00000482192 RETREG2Q8NC44 543 aa13.59□□□□□ -0.23
HMGN1-213ENST00000482192 CCDC148Q8NFR7 591 aa13.59□□□□□ -0.23
HMGN1-213ENST00000482192 PGBD1Q96JS3 809 aa13.59□□□□□ -0.23
HMGN1-213ENST00000482192 GPR20Q99678 358 aa13.59□□□□□ -0.23
HMGN1-213ENST00000482192 SLC26A6Q9BXS9 759 aa13.59□□□□□ -0.23
HMGN1-213ENST00000482192 ZMYND12Q9H0C1 365 aa13.59□□□□□ -0.23
HMGN1-213ENST00000482192 MTIF3Q9H2K0 278 aaKnown RBP13.59□□□□□ -0.23
HMGN1-213ENST00000482192 TUT1Q9H6E5 874 aaKnown RBP13.59□□□□□ -0.23
HMGN1-213ENST00000482192 JADE2Q9NQC1 790 aa13.59□□□□□ -0.23
HMGN1-213ENST00000482192 TMEM260Q9NX78 707 aa13.59□□□□□ -0.23
HMGN1-213ENST00000482192 HDAC6Q9UBN7 1215 aa13.59□□□□□ -0.23
HMGN1-213ENST00000482192 DNAH12Q6ZR08 3092 aa13.58□□□□□ -0.23
HMGN1-213ENST00000482192 CPLX1O14810 134 aa13.58□□□□□ -0.24
HMGN1-213ENST00000482192 KCNA2P16389 499 aa13.58□□□□□ -0.24
HMGN1-213ENST00000482192 GNA11P29992 359 aa13.58□□□□□ -0.24
HMGN1-213ENST00000482192 RFC2P35250 354 aa13.58□□□□□ -0.24
HMGN1-213ENST00000482192 SREBF1P36956 1147 aa13.58□□□□□ -0.24
HMGN1-213ENST00000482192 SP4Q02446 784 aa13.58□□□□□ -0.24
HMGN1-213ENST00000482192 FAM109BQ6ICB4 259 aaPredicted RBP13.58□□□□□ -0.24
HMGN1-213ENST00000482192 CPLX2Q6PUV4 134 aaKnown RBP13.58□□□□□ -0.24
HMGN1-213ENST00000482192 REXO1Q8N1G1 1221 aaKnown RBP13.58□□□□□ -0.24
HMGN1-213ENST00000482192 DEFB123Q8N688 67 aa13.58□□□□□ -0.24
HMGN1-213ENST00000482192 CAGE1Q8TC20 777 aa13.58□□□□□ -0.24
HMGN1-213ENST00000482192 SCLYQ96I15 445 aa13.58□□□□□ -0.24
HMGN1-213ENST00000482192 CTAGE1Q96RT6 745 aa13.58□□□□□ -0.24
HMGN1-213ENST00000482192 MXRA8Q9BRK3 442 aa13.58□□□□□ -0.24
HMGN1-213ENST00000482192 ZNF215Q9UL58 517 aaPredicted RBP13.58□□□□□ -0.24
HMGN1-213ENST00000482192 ATP9AO75110 1047 aa13.57□□□□□ -0.24
HMGN1-213ENST00000482192 PPFIA3O75145 1194 aa13.57□□□□□ -0.24
HMGN1-213ENST00000482192 FGBP02675 491 aa13.57□□□□□ -0.24
HMGN1-213ENST00000482192 IQCF3P0C7M6 154 aa13.57□□□□□ -0.24
HMGN1-213ENST00000482192 ARHGAP4P98171 946 aa13.57□□□□□ -0.24
HMGN1-213ENST00000482192 CEP55Q53EZ4 464 aa13.57□□□□□ -0.24
HMGN1-213ENST00000482192 RASIP1Q5U651 963 aa13.57□□□□□ -0.24
HMGN1-213ENST00000482192 JAKMIP3Q5VZ66 844 aa13.57□□□□□ -0.24
HMGN1-213ENST00000482192 BICD2Q8TD16 824 aa13.57□□□□□ -0.24
HMGN1-213ENST00000482192 AFAP1L1Q8TED9 768 aa13.57□□□□□ -0.24
HMGN1-213ENST00000482192 HERVK_113Q902F9 699 aa13.57□□□□□ -0.24
HMGN1-213ENST00000482192 IL17RAQ96F46 866 aa13.57□□□□□ -0.24
HMGN1-213ENST00000482192 LARP6Q9BRS8 491 aaKnown RBP13.57□□□□□ -0.24
HMGN1-213ENST00000482192 KCNH7Q9NS40 1196 aa13.57□□□□□ -0.24
HMGN1-213ENST00000482192 PKD2L1Q9P0L9 805 aa13.57□□□□□ -0.24
HMGN1-213ENST00000482192 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.56□□□□□ -0.24
HMGN1-213ENST00000482192 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.56□□□□□ -0.24
HMGN1-213ENST00000482192 CDKL5O76039 1030 aa13.56□□□□□ -0.24
HMGN1-213ENST00000482192 TCF7P36402 384 aaPredicted RBP13.56□□□□□ -0.24
HMGN1-213ENST00000482192 ZNF76P36508 570 aa13.56□□□□□ -0.24
HMGN1-213ENST00000482192 SSRP1Q08945 709 aaKnown RBP13.56□□□□□ -0.24
HMGN1-213ENST00000482192 RBL2Q08999 1139 aa13.56□□□□□ -0.24
HMGN1-213ENST00000482192 STK3Q13188 491 aa13.56□□□□□ -0.24
HMGN1-213ENST00000482192 PTK7Q13308 1070 aa13.56□□□□□ -0.24
HMGN1-213ENST00000482192 ANKRD1Q15327 319 aa13.56□□□□□ -0.24
HMGN1-213ENST00000482192 UTP14CQ5TAP6 766 aaKnown RBP13.56□□□□□ -0.24
HMGN1-213ENST00000482192 ZNF697Q5TEC3 545 aa13.56□□□□□ -0.24
HMGN1-213ENST00000482192 Q7L0L9 218 aa13.56□□□□□ -0.24
HMGN1-213ENST00000482192 TRIM50Q86XT4 487 aa13.56□□□□□ -0.24
HMGN1-213ENST00000482192 JPH1Q9HDC5 661 aaPredicted RBP13.56□□□□□ -0.24
HMGN1-213ENST00000482192 SH3GLB2Q9NR46 395 aa13.56□□□□□ -0.24
HMGN1-213ENST00000482192 VPS54Q9P1Q0 977 aa13.56□□□□□ -0.24
HMGN1-213ENST00000482192 C17orf102A2RUQ5 167 aa13.55□□□□□ -0.24
HMGN1-213ENST00000482192 MEIS1O00470 390 aa13.55□□□□□ -0.24
HMGN1-213ENST00000482192 DEXIO95424 95 aa13.55□□□□□ -0.24
HMGN1-213ENST00000482192 PARNO95453 639 aaKnown RBP13.55□□□□□ -0.24
HMGN1-213ENST00000482192 CYP3A4P08684 503 aa13.55□□□□□ -0.24
HMGN1-213ENST00000482192 SMIM10L2AP0DMW4 78 aa13.55□□□□□ -0.24
HMGN1-213ENST00000482192 SMIM10L2BP0DMW5 78 aa13.55□□□□□ -0.24
HMGN1-213ENST00000482192 SELPP16109 830 aa13.55□□□□□ -0.24
HMGN1-213ENST00000482192 LRRC8DQ7L1W4 858 aa13.55□□□□□ -0.24
HMGN1-213ENST00000482192 NIPA1Q7RTP0 329 aa13.55□□□□□ -0.24
HMGN1-213ENST00000482192 OTOP2Q7RTS6 562 aa13.55□□□□□ -0.24
HMGN1-213ENST00000482192 DEFB128Q7Z7B8 93 aa13.55□□□□□ -0.24
HMGN1-213ENST00000482192 CYP2W1Q8TAV3 490 aa13.55□□□□□ -0.24
HMGN1-213ENST00000482192 CRYGNQ8WXF5 182 aa13.55□□□□□ -0.24
HMGN1-213ENST00000482192 SEPT1Q8WYJ6 367 aa13.55□□□□□ -0.24
HMGN1-213ENST00000482192 DHX38Q92620 1227 aaKnown RBP13.55□□□□□ -0.24
HMGN1-213ENST00000482192 SDF4Q9BRK5 362 aa13.55□□□□□ -0.24
HMGN1-213ENST00000482192 SLKQ9H2G2 1235 aaPredicted RBP13.55□□□□□ -0.24
HMGN1-213ENST00000482192 AGO4Q9HCK5 861 aaKnown RBP13.55□□□□□ -0.24
HMGN1-213ENST00000482192 MTMR10Q9NXD2 777 aa13.55□□□□□ -0.24
HMGN1-213ENST00000482192 TELO2Q9Y4R8 837 aa13.55□□□□□ -0.24
HMGN1-213ENST00000482192 NFASCO94856 1347 aa13.55□□□□□ -0.24
HMGN1-213ENST00000482192 TMEM265A0A087WTH1 108 aa13.54□□□□□ -0.24
HMGN1-213ENST00000482192 GSTTP1A0A1W2PQM5 241 aa13.54□□□□□ -0.24
HMGN1-213ENST00000482192 ARP10275 920 aa13.54□□□□□ -0.24
HMGN1-213ENST00000482192 GNAT1P11488 350 aa13.54□□□□□ -0.24
HMGN1-213ENST00000482192 CKBP12277 381 aa13.54□□□□□ -0.24
HMGN1-213ENST00000482192 ACTN1P12814 892 aa13.54□□□□□ -0.24
HMGN1-213ENST00000482192 HOXC8P31273 242 aa13.54□□□□□ -0.24
HMGN1-213ENST00000482192 NLRP5P59047 1200 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms