RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 ATXN7L3BQ96GX2 97 aa12.49□□□□□ -0.41
TRIM27-205ENST00000481474 CNOT7Q9UIV1 285 aaKnown RBP12.49□□□□□ -0.41
TRIM27-205ENST00000481474 CAMKK1Q8N5S9 505 aa12.49□□□□□ -0.41
TRIM27-205ENST00000481474 ANKRD50Q9ULJ7 1429 aa12.49□□□□□ -0.41
TRIM27-205ENST00000481474 TMEM62Q0P6H9 643 aa12.49□□□□□ -0.41
TRIM27-205ENST00000481474 PAK1Q13153 545 aa12.49□□□□□ -0.41
TRIM27-205ENST00000481474 FBXO18Q8NFZ0 1043 aa12.49□□□□□ -0.41
TRIM27-205ENST00000481474 AGR3Q8TD06 166 aa12.49□□□□□ -0.41
TRIM27-205ENST00000481474 VPS8Q8N3P4 1428 aa12.49□□□□□ -0.41
TRIM27-205ENST00000481474 CCDC78A2IDD5 438 aa12.49□□□□□ -0.41
TRIM27-205ENST00000481474 CCND2P30279 289 aa12.49□□□□□ -0.41
TRIM27-205ENST00000481474 BTDP43251 543 aa12.49□□□□□ -0.41
TRIM27-205ENST00000481474 MFSD14CQ5VZR4 134 aa12.49□□□□□ -0.41
TRIM27-205ENST00000481474 TEX12Q9BXU0 123 aa12.49□□□□□ -0.41
TRIM27-205ENST00000481474 NEMFO60524 1076 aa12.49□□□□□ -0.41
TRIM27-205ENST00000481474 XRCC5P13010 732 aaKnown RBP12.49□□□□□ -0.41
TRIM27-205ENST00000481474 PDXDC2PQ6P474 469 aa12.49□□□□□ -0.41
TRIM27-205ENST00000481474 WDR75Q8IWA0 830 aaKnown RBP12.49□□□□□ -0.41
TRIM27-205ENST00000481474 REXO1Q8N1G1 1221 aaKnown RBP12.49□□□□□ -0.41
TRIM27-205ENST00000481474 SLC7A3Q8WY07 619 aa12.49□□□□□ -0.41
TRIM27-205ENST00000481474 CHCHD3Q9NX63 227 aaKnown RBP12.49□□□□□ -0.41
TRIM27-205ENST00000481474 RAPGEF2Q9Y4G8 1499 aa12.49□□□□□ -0.41
TRIM27-205ENST00000481474 ATP6V1C1P21283 382 aa12.49□□□□□ -0.41
TRIM27-205ENST00000481474 NFKBIAP25963 317 aa12.49□□□□□ -0.41
TRIM27-205ENST00000481474 AKT1P31749 480 aa12.49□□□□□ -0.41
TRIM27-205ENST00000481474 MAGEA1P43355 309 aa12.49□□□□□ -0.41
TRIM27-205ENST00000481474 COMMD2Q86X83 199 aa12.49□□□□□ -0.41
TRIM27-205ENST00000481474 THNSL1Q8IYQ7 743 aa12.49□□□□□ -0.41
TRIM27-205ENST00000481474 UBE2Q2Q8WVN8 375 aa12.49□□□□□ -0.41
TRIM27-205ENST00000481474 SLC25A13Q9UJS0 675 aa12.49□□□□□ -0.41
TRIM27-205ENST00000481474 SYCE1LA8MT33 242 aa12.48□□□□□ -0.41
TRIM27-205ENST00000481474 DFFAO00273 331 aa12.48□□□□□ -0.41
TRIM27-205ENST00000481474 ATF2P15336 505 aa12.48□□□□□ -0.41
TRIM27-205ENST00000481474 STAT1P42224 750 aa12.48□□□□□ -0.41
TRIM27-205ENST00000481474 SPDYAQ5MJ70 313 aa12.48□□□□□ -0.41
TRIM27-205ENST00000481474 SECISBP2LQ93073 1101 aaKnown RBP12.48□□□□□ -0.41
TRIM27-205ENST00000481474 RMDN1Q96DB5 314 aa12.48□□□□□ -0.41
TRIM27-205ENST00000481474 RERGLQ9H628 205 aa12.48□□□□□ -0.41
TRIM27-205ENST00000481474 SLC39A2Q9NP94 309 aa12.48□□□□□ -0.41
TRIM27-205ENST00000481474 PRG4Q92954 1404 aaPredicted RBP12.48□□□□□ -0.41
TRIM27-205ENST00000481474 SNUPNO95149 360 aaKnown RBP12.48□□□□□ -0.41
TRIM27-205ENST00000481474 GRIK1P39086 918 aa12.48□□□□□ -0.41
TRIM27-205ENST00000481474 IFNAR2P48551 515 aa12.48□□□□□ -0.41
TRIM27-205ENST00000481474 PDCLQ13371 301 aa12.48□□□□□ -0.41
TRIM27-205ENST00000481474 SYTL3Q4VX76 610 aa12.48□□□□□ -0.41
TRIM27-205ENST00000481474 BTBD8Q5XKL5 378 aa12.48□□□□□ -0.41
TRIM27-205ENST00000481474 PATL1Q86TB9 770 aaKnown RBP12.48□□□□□ -0.41
TRIM27-205ENST00000481474 MIS12Q9H081 205 aa12.48□□□□□ -0.41
TRIM27-205ENST00000481474 RIPOR2Q9Y4F9 1068 aa12.48□□□□□ -0.41
TRIM27-205ENST00000481474 KRIT1O00522 736 aa12.48□□□□□ -0.41
TRIM27-205ENST00000481474 PBLDP30039 288 aaPredicted RBP12.48□□□□□ -0.41
TRIM27-205ENST00000481474 ARSJQ5FYB0 599 aaPredicted RBP12.48□□□□□ -0.41
TRIM27-205ENST00000481474 NOSTRINQ8IVI9 506 aa12.48□□□□□ -0.41
TRIM27-205ENST00000481474 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.48□□□□□ -0.414e-12■■■■□ 24.1
TRIM27-205ENST00000481474 TRIM4Q9C037 500 aa12.48□□□□□ -0.41
TRIM27-205ENST00000481474 SMARCAD1Q9H4L7 1026 aa12.48□□□□□ -0.41
TRIM27-205ENST00000481474 PALMDQ9NP74 551 aa12.48□□□□□ -0.41
TRIM27-205ENST00000481474 DDX56Q9NY93 547 aaKnown RBP12.48□□□□□ -0.41
TRIM27-205ENST00000481474 KRT7P08729 469 aa12.48□□□□□ -0.41
TRIM27-205ENST00000481474 ZSCAN23Q3MJ62 389 aa12.48□□□□□ -0.41
TRIM27-205ENST00000481474 RGL4Q8IZJ4 473 aa12.48□□□□□ -0.41
TRIM27-205ENST00000481474 PNKPQ96T60 521 aa12.48□□□□□ -0.41
TRIM27-205ENST00000481474 ENTPD7Q9NQZ7 604 aa12.48□□□□□ -0.41
TRIM27-205ENST00000481474 DONSONQ9NYP3 566 aa12.48□□□□□ -0.41
TRIM27-205ENST00000481474 GTSE1Q9NYZ3 720 aa12.48□□□□□ -0.41
TRIM27-205ENST00000481474 NBPF26B4DH59 902 aa12.48□□□□□ -0.41
TRIM27-205ENST00000481474 PDE8AO60658 829 aa12.48□□□□□ -0.41
TRIM27-205ENST00000481474 SASH1O94885 1247 aa12.48□□□□□ -0.41
TRIM27-205ENST00000481474 MYO1EQ12965 1108 aa12.48□□□□□ -0.41
TRIM27-205ENST00000481474 GTF2H3Q13889 308 aa12.48□□□□□ -0.41
TRIM27-205ENST00000481474 RUFY4Q6ZNE9 571 aa12.48□□□□□ -0.41
TRIM27-205ENST00000481474 ALKBH4Q9NXW9 302 aa12.48□□□□□ -0.41
TRIM27-205ENST00000481474 TIPRLO75663 272 aa12.47□□□□□ -0.41
TRIM27-205ENST00000481474 TMCC1O94876 653 aa12.47□□□□□ -0.41
TRIM27-205ENST00000481474 ALDH1A1P00352 501 aa12.47□□□□□ -0.41
TRIM27-205ENST00000481474 INPP5BP32019 993 aa12.47□□□□□ -0.41
TRIM27-205ENST00000481474 ZKSCAN8Q15776 578 aaPredicted RBP12.47□□□□□ -0.41
TRIM27-205ENST00000481474 SLC27A3Q5K4L6 730 aa12.47□□□□□ -0.41
TRIM27-205ENST00000481474 PAPOLBQ9NRJ5 636 aaKnown RBP12.47□□□□□ -0.41
TRIM27-205ENST00000481474 SDSP20132 328 aa12.47□□□□□ -0.41
TRIM27-205ENST00000481474 CREB3L3Q68CJ9 461 aa12.47□□□□□ -0.41
TRIM27-205ENST00000481474 RPAINQ86UA6 219 aa12.47□□□□□ -0.41
TRIM27-205ENST00000481474 PASD1Q8IV76 773 aa12.47□□□□□ -0.41
TRIM27-205ENST00000481474 NAF1Q96HR8 494 aaKnown RBP12.47□□□□□ -0.41
TRIM27-205ENST00000481474 PLCH2O75038 1416 aa12.47□□□□□ -0.41
TRIM27-205ENST00000481474 GPAA1O43292 621 aa12.47□□□□□ -0.41
TRIM27-205ENST00000481474 ALDH1A2O94788 518 aa12.47□□□□□ -0.41
TRIM27-205ENST00000481474 CACNB3P54284 484 aa12.47□□□□□ -0.41
TRIM27-205ENST00000481474 ANKRD40Q6AI12 368 aa12.47□□□□□ -0.41
TRIM27-205ENST00000481474 SH3TC1Q8TE82 1336 aa12.47□□□□□ -0.41
TRIM27-205ENST00000481474 EGFRP00533 1210 aa12.47□□□□□ -0.41
TRIM27-205ENST00000481474 HNRNPCP07910 306 aaKnown RBP eCLIP12.47□□□□□ -0.417e-7■■■■□ 21.6
TRIM27-205ENST00000481474 EIF2AK2P19525 551 aaKnown RBP12.47□□□□□ -0.41
TRIM27-205ENST00000481474 POLR2FP61218 127 aaKnown RBP12.47□□□□□ -0.41
TRIM27-205ENST00000481474 SLFN13Q68D06 897 aa12.47□□□□□ -0.41
TRIM27-205ENST00000481474 IFT20Q8IY31 132 aa12.47□□□□□ -0.41
TRIM27-205ENST00000481474 IWS1Q96ST2 819 aa12.47□□□□□ -0.41
TRIM27-205ENST00000481474 BABAM1Q9NWV8 329 aa12.47□□□□□ -0.41
TRIM27-205ENST00000481474 HOXA13P31271 388 aaPredicted RBP12.47□□□□□ -0.41
TRIM27-205ENST00000481474 DCUN1D1Q96GG9 259 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms