RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 CIITAP33076 1130 aa23.14■■□□□ 1.29
CTSA-206ENST00000480961 USP11P51784 963 aa23.14■■□□□ 1.29
CTSA-206ENST00000480961 PURAQ00577 322 aaKnown RBP23.14■■□□□ 1.29
CTSA-206ENST00000480961 ITGB3BPQ13352 177 aaPredicted RBP23.14■■□□□ 1.29
CTSA-206ENST00000480961 SAFBQ15424 915 aaKnown RBP eCLIP23.14■■□□□ 1.29
CTSA-206ENST00000480961 METTL7BQ6UX53 244 aa23.14■■□□□ 1.29
CTSA-206ENST00000480961 SENP7Q9BQF6 1050 aa23.14■■□□□ 1.29
CTSA-206ENST00000480961 MTG1Q9BT17 334 aaPredicted RBP23.14■■□□□ 1.29
CTSA-206ENST00000480961 POLR3EQ9NVU0 708 aa23.14■■□□□ 1.29
CTSA-206ENST00000480961 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.14■■□□□ 1.29
CTSA-206ENST00000480961 MAFGO15525 162 aa23.13■■□□□ 1.29
CTSA-206ENST00000480961 RTP1P59025 263 aa23.13■■□□□ 1.29
CTSA-206ENST00000480961 LETM2Q2VYF4 491 aa23.13■■□□□ 1.29
CTSA-206ENST00000480961 TRIM60Q495X7 471 aa23.13■■□□□ 1.29
CTSA-206ENST00000480961 NIPA1Q7RTP0 329 aa23.13■■□□□ 1.29
CTSA-206ENST00000480961 C7orf61Q8IZ16 206 aa23.13■■□□□ 1.29
CTSA-206ENST00000480961 SNX21Q969T3 373 aa23.13■■□□□ 1.29
CTSA-206ENST00000480961 LENG9Q96B70 501 aa23.13■■□□□ 1.29
CTSA-206ENST00000480961 GRIN2DO15399 1336 aa23.12■■□□□ 1.29
CTSA-206ENST00000480961 DDX39AO00148 427 aaKnown RBP23.12■■□□□ 1.29
CTSA-206ENST00000480961 NOP56O00567 594 aaKnown RBP23.12■■□□□ 1.29
CTSA-206ENST00000480961 EVI5O60447 810 aa23.12■■□□□ 1.29
CTSA-206ENST00000480961 ZNF286BP0CG31 522 aa23.12■■□□□ 1.29
CTSA-206ENST00000480961 DGKDQ16760 1214 aa23.12■■□□□ 1.29
CTSA-206ENST00000480961 GIMAP8Q8ND71 665 aaPredicted RBP23.12■■□□□ 1.29
CTSA-206ENST00000480961 GJA10Q969M2 543 aa23.12■■□□□ 1.29
CTSA-206ENST00000480961 GPR20Q99678 358 aa23.12■■□□□ 1.29
CTSA-206ENST00000480961 ZNF577Q9BSK1 485 aa23.12■■□□□ 1.29
CTSA-206ENST00000480961 ELP1O95163 1332 aa23.11■■□□□ 1.29
CTSA-206ENST00000480961 KPNA6O60684 536 aa23.11■■□□□ 1.29
CTSA-206ENST00000480961 PQBP1O60828 265 aaKnown RBP23.11■■□□□ 1.29
CTSA-206ENST00000480961 CABYRO75952 493 aa23.11■■□□□ 1.29
CTSA-206ENST00000480961 TLE2Q04725 743 aa23.11■■□□□ 1.29
CTSA-206ENST00000480961 ITGA7Q13683 1181 aa23.11■■□□□ 1.29
CTSA-206ENST00000480961 UTP14CQ5TAP6 766 aaKnown RBP23.11■■□□□ 1.29
CTSA-206ENST00000480961 NEK8Q86SG6 692 aa23.11■■□□□ 1.29
CTSA-206ENST00000480961 SDF4Q9BRK5 362 aa23.11■■□□□ 1.29
CTSA-206ENST00000480961 A0A0U1RQG5 324 aaPredicted RBP23.1■■□□□ 1.29
CTSA-206ENST00000480961 KIF28PB7ZC32 967 aa23.1■■□□□ 1.29
CTSA-206ENST00000480961 IPO5O00410 1097 aaKnown RBP23.1■■□□□ 1.29
CTSA-206ENST00000480961 MSH4O15457 936 aa23.1■■□□□ 1.29
CTSA-206ENST00000480961 PPFIA4O75335 1185 aa23.1■■□□□ 1.29
CTSA-206ENST00000480961 ATP2B1P20020 1258 aa23.1■■□□□ 1.29
CTSA-206ENST00000480961 HSCBQ8IWL3 235 aa23.1■■□□□ 1.29
CTSA-206ENST00000480961 KAT2BQ92831 832 aa23.1■■□□□ 1.29
CTSA-206ENST00000480961 JPH1Q9HDC5 661 aaPredicted RBP23.1■■□□□ 1.29
CTSA-206ENST00000480961 KIF3AQ9Y496 699 aa23.1■■□□□ 1.29
CTSA-206ENST00000480961 CYP3A7-CYP3A51PA0A087WV96 503 aa23.09■■□□□ 1.29
CTSA-206ENST00000480961 GSTTP1A0A1W2PQM5 241 aa23.09■■□□□ 1.29
CTSA-206ENST00000480961 ARVCFO00192 962 aa23.09■■□□□ 1.29
CTSA-206ENST00000480961 SLC37A4O43826 429 aa23.09■■□□□ 1.29
CTSA-206ENST00000480961 CCNT1O60563 726 aaKnown RBP23.09■■□□□ 1.29
CTSA-206ENST00000480961 CYP3A7P24462 503 aa23.09■■□□□ 1.29
CTSA-206ENST00000480961 SETQ01105 290 aaPredicted RBP23.09■■□□□ 1.29
CTSA-206ENST00000480961 GNL2Q13823 731 aaKnown RBP23.09■■□□□ 1.29
CTSA-206ENST00000480961 SNX17Q15036 470 aa23.09■■□□□ 1.29
CTSA-206ENST00000480961 NBPF20Q3BBV1 942 aa23.09■■□□□ 1.29
CTSA-206ENST00000480961 DDX25Q9UHL0 483 aaKnown RBP23.09■■□□□ 1.29
CTSA-206ENST00000480961 KIAA1217Q5T5P2 1943 aa23.09■■□□□ 1.29
CTSA-206ENST00000480961 H3BQV1 296 aa23.08■■□□□ 1.29
CTSA-206ENST00000480961 WNT7AO00755 349 aa23.08■■□□□ 1.29
CTSA-206ENST00000480961 DHX15O43143 795 aaKnown RBP23.08■■□□□ 1.29
CTSA-206ENST00000480961 HOXD8P13378 290 aaPredicted RBP23.08■■□□□ 1.29
CTSA-206ENST00000480961 CDK7P50613 346 aa23.08■■□□□ 1.29
CTSA-206ENST00000480961 Q4G0T1 1027 aa23.08■■□□□ 1.29
CTSA-206ENST00000480961 LARP1BQ659C4 914 aaKnown RBP23.08■■□□□ 1.29
CTSA-206ENST00000480961 TRIM50Q86XT4 487 aa23.08■■□□□ 1.29
CTSA-206ENST00000480961 SLC9A2Q9UBY0 812 aa23.08■■□□□ 1.29
CTSA-206ENST00000480961 ZMYND8Q9ULU4 1186 aaPredicted RBP23.08■■□□□ 1.29
CTSA-206ENST00000480961 NFASCO94856 1347 aa23.08■■□□□ 1.28
CTSA-206ENST00000480961 CCNE2O96020 404 aa23.07■■□□□ 1.28
CTSA-206ENST00000480961 LGALS2P05162 132 aa23.07■■□□□ 1.28
CTSA-206ENST00000480961 TCF7P36402 384 aaPredicted RBP23.07■■□□□ 1.28
CTSA-206ENST00000480961 PSEN2P49810 448 aa23.07■■□□□ 1.28
CTSA-206ENST00000480961 ACTR2P61160 394 aa23.07■■□□□ 1.28
CTSA-206ENST00000480961 FAM47CQ5HY64 1035 aa23.07■■□□□ 1.28
CTSA-206ENST00000480961 MCTP1Q6DN14 999 aa23.07■■□□□ 1.28
CTSA-206ENST00000480961 SEPT1Q8WYJ6 367 aa23.07■■□□□ 1.28
CTSA-206ENST00000480961 MBOAT7Q96N66 472 aa23.07■■□□□ 1.28
CTSA-206ENST00000480961 C16orf70Q9BSU1 422 aa23.07■■□□□ 1.28
CTSA-206ENST00000480961 FOXP1Q9H334 677 aaPredicted RBP23.07■■□□□ 1.28
CTSA-206ENST00000480961 SYN1P17600 705 aa23.06■■□□□ 1.28
CTSA-206ENST00000480961 MFSD10Q14728 455 aa23.06■■□□□ 1.28
CTSA-206ENST00000480961 C1orf53Q5VUE5 145 aa23.06■■□□□ 1.28
CTSA-206ENST00000480961 SLC43A3Q8NBI5 491 aa23.06■■□□□ 1.28
CTSA-206ENST00000480961 SPRYD3Q8NCJ5 442 aa23.06■■□□□ 1.28
CTSA-206ENST00000480961 TRPV6Q9H1D0 765 aa23.06■■□□□ 1.28
CTSA-206ENST00000480961 H0YGN5 161 aa23.05■■□□□ 1.28
CTSA-206ENST00000480961 KIAA0753Q2KHM9 967 aa23.05■■□□□ 1.28
CTSA-206ENST00000480961 PPP4R3AQ6IN85 833 aa23.05■■□□□ 1.28
CTSA-206ENST00000480961 MOXD1Q6UVY6 613 aa23.05■■□□□ 1.28
CTSA-206ENST00000480961 NOSTRINQ8IVI9 506 aa23.05■■□□□ 1.28
CTSA-206ENST00000480961 SLC5A5Q92911 643 aa23.05■■□□□ 1.28
CTSA-206ENST00000480961 PRDM5Q9NQX1 630 aaPredicted RBP23.05■■□□□ 1.28
CTSA-206ENST00000480961 TBC1D22BQ9NU19 505 aa23.05■■□□□ 1.28
CTSA-206ENST00000480961 NR2E3Q9Y5X4 410 aa23.05■■□□□ 1.28
CTSA-206ENST00000480961 F2P00734 622 aa23.04■■□□□ 1.28
CTSA-206ENST00000480961 LRCH2Q5VUJ6 765 aa23.04■■□□□ 1.28
CTSA-206ENST00000480961 ANKRD33Q7Z3H0 272 aa23.04■■□□□ 1.28
CTSA-206ENST00000480961 SH3RF1Q7Z6J0 888 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms