RNA–Protein interactions for RNA: ENST00000480737.1

FN1-221, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 384 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-221ENST00000480737 LBX2Q6XYB7 198 aa4.94□□□□□ -1.62
FN1-221ENST00000480737 OTOP3Q7RTS5 596 aa4.94□□□□□ -1.62
FN1-221ENST00000480737 STK32CQ86UX6 486 aa4.94□□□□□ -1.62
FN1-221ENST00000480737 UHMK1Q8TAS1 419 aaKnown RBP4.94□□□□□ -1.62
FN1-221ENST00000480737 ZNF428Q96B54 188 aa4.94□□□□□ -1.62
FN1-221ENST00000480737 LCORQ96JN0 433 aaPredicted RBP4.94□□□□□ -1.62
FN1-221ENST00000480737 PHF20Q9BVI0 1012 aa4.94□□□□□ -1.62
FN1-221ENST00000480737 INVSQ9Y283 1065 aa4.94□□□□□ -1.62
FN1-221ENST00000480737 KRIT1O00522 736 aa4.93□□□□□ -1.62
FN1-221ENST00000480737 DDX3XO00571 662 aaKnown RBP eCLIP4.93□□□□□ -1.62
FN1-221ENST00000480737 CHGBP05060 677 aa4.93□□□□□ -1.62
FN1-221ENST00000480737 EPHA5P54756 1037 aa4.93□□□□□ -1.62
FN1-221ENST00000480737 MLLT6P55198 1093 aaPredicted RBP4.93□□□□□ -1.62
FN1-221ENST00000480737 SURF1Q15526 300 aa4.93□□□□□ -1.62
FN1-221ENST00000480737 KIZQ2M2Z5 673 aa4.93□□□□□ -1.62
FN1-221ENST00000480737 MCTP2Q6DN12 878 aa4.93□□□□□ -1.62
FN1-221ENST00000480737 FAM124AQ86V42 546 aa4.93□□□□□ -1.62
FN1-221ENST00000480737 TRIM48Q8IWZ4 208 aa4.93□□□□□ -1.62
FN1-221ENST00000480737 DTX3Q8N9I9 347 aa4.93□□□□□ -1.62
FN1-221ENST00000480737 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.93□□□□□ -1.62
FN1-221ENST00000480737 CLIC6Q96NY7 704 aa4.93□□□□□ -1.62
FN1-221ENST00000480737 PPARGC1AQ9UBK2 798 aaKnown RBP4.93□□□□□ -1.62
FN1-221ENST00000480737 WNT9AO14904 365 aa4.92□□□□□ -1.62
FN1-221ENST00000480737 PABPC1P11940 636 aaKnown RBP4.92□□□□□ -1.62
FN1-221ENST00000480737 GRK2P25098 689 aa4.92□□□□□ -1.62
FN1-221ENST00000480737 IL13P35225 146 aa4.92□□□□□ -1.62
FN1-221ENST00000480737 GRK3P35626 688 aa4.92□□□□□ -1.62
FN1-221ENST00000480737 GPR85P60893 370 aa4.92□□□□□ -1.62
FN1-221ENST00000480737 ZXDCQ2QGD7 858 aaPredicted RBP4.92□□□□□ -1.62
FN1-221ENST00000480737 PLEKHH3Q7Z736 793 aa4.92□□□□□ -1.62
FN1-221ENST00000480737 LRRC47Q8N1G4 583 aaKnown RBP4.92□□□□□ -1.62
FN1-221ENST00000480737 PIP4K2CQ8TBX8 421 aa4.92□□□□□ -1.62
FN1-221ENST00000480737 YIPF4Q9BSR8 244 aa4.92□□□□□ -1.62
FN1-221ENST00000480737 DLL4Q9NR61 685 aa4.92□□□□□ -1.62
FN1-221ENST00000480737 ST7Q9NRC1 585 aa4.92□□□□□ -1.62
FN1-221ENST00000480737 SMPD4Q9NXE4 827 aa4.92□□□□□ -1.62
FN1-221ENST00000480737 R3HCC1Q9Y3T6 440 aaKnown RBP4.92□□□□□ -1.62
FN1-221ENST00000480737 EPHB4P54760 987 aa4.91□□□□□ -1.62
FN1-221ENST00000480737 CPZQ66K79 652 aa4.91□□□□□ -1.62
FN1-221ENST00000480737 USP53Q70EK8 1073 aa4.91□□□□□ -1.62
FN1-221ENST00000480737 KLHL36Q8N4N3 616 aa4.91□□□□□ -1.62
FN1-221ENST00000480737 CLEC4DQ8WXI8 215 aa4.91□□□□□ -1.62
FN1-221ENST00000480737 CHAMP1Q96JM3 812 aa4.91□□□□□ -1.62
FN1-221ENST00000480737 JAM3Q9BX67 310 aa4.91□□□□□ -1.62
FN1-221ENST00000480737 TELO2Q9Y4R8 837 aa4.91□□□□□ -1.62
FN1-221ENST00000480737 TRAV20A0A0B4J274 112 aa4.9□□□□□ -1.63
FN1-221ENST00000480737 PRODHO43272 600 aa4.9□□□□□ -1.63
FN1-221ENST00000480737 LAMTOR5O43504 91 aa4.9□□□□□ -1.63
FN1-221ENST00000480737 ADCY3O60266 1144 aa4.9□□□□□ -1.63
FN1-221ENST00000480737 KLHL18O94889 574 aa4.9□□□□□ -1.63
FN1-221ENST00000480737 FAHP16930 419 aa4.9□□□□□ -1.63
FN1-221ENST00000480737 ZNF20P17024 532 aa4.9□□□□□ -1.63
FN1-221ENST00000480737 TNFRSF1AP19438 455 aa4.9□□□□□ -1.63
FN1-221ENST00000480737 NBPF6Q5VWK0 638 aa4.9□□□□□ -1.63
FN1-221ENST00000480737 PRAMEF18Q5VWM3 479 aa4.9□□□□□ -1.63
FN1-221ENST00000480737 KCNT2Q6UVM3 1135 aa4.9□□□□□ -1.63
FN1-221ENST00000480737 IFNL3Q8IZI9 196 aa4.9□□□□□ -1.63
FN1-221ENST00000480737 DNERQ8NFT8 737 aa4.9□□□□□ -1.63
FN1-221ENST00000480737 NBPF4Q96M43 638 aa4.9□□□□□ -1.63
FN1-221ENST00000480737 ZSWIM3Q96MP5 696 aa4.9□□□□□ -1.63
FN1-221ENST00000480737 TMEM168Q9H0V1 697 aa4.9□□□□□ -1.63
FN1-221ENST00000480737 L2HGDHQ9H9P8 463 aa4.9□□□□□ -1.63
FN1-221ENST00000480737 PPP4R1LQ9P1A2 415 aa4.9□□□□□ -1.63
FN1-221ENST00000480737 ADAM29Q9UKF5 820 aa4.9□□□□□ -1.63
FN1-221ENST00000480737 SLC27A2O14975 620 aa4.89□□□□□ -1.63
FN1-221ENST00000480737 RASGRF1Q13972 1273 aa4.89□□□□□ -1.63
FN1-221ENST00000480737 PAN2Q504Q3 1202 aaKnown RBP4.89□□□□□ -1.63
FN1-221ENST00000480737 YOD1Q5VVQ6 348 aaPredicted RBP4.89□□□□□ -1.63
FN1-221ENST00000480737 NSMFQ6X4W1 530 aa4.89□□□□□ -1.63
FN1-221ENST00000480737 DPH6Q7L8W6 267 aa4.89□□□□□ -1.63
FN1-221ENST00000480737 CD248Q9HCU0 757 aa4.89□□□□□ -1.63
FN1-221ENST00000480737 KCND1Q9NSA2 647 aa4.89□□□□□ -1.63
FN1-221ENST00000480737 RBPJLQ9UBG7 517 aa4.89□□□□□ -1.63
FN1-221ENST00000480737 NUB1Q9Y5A7 615 aa4.89□□□□□ -1.63
FN1-221ENST00000480737 ASXL2Q76L83 1435 aa4.89□□□□□ -1.63
FN1-221ENST00000480737 NKRFO15226 690 aaKnown RBP eCLIP4.88□□□□□ -1.63
FN1-221ENST00000480737 MATN3O15232 486 aa4.88□□□□□ -1.63
FN1-221ENST00000480737 KNG1P01042 644 aa4.88□□□□□ -1.63
FN1-221ENST00000480737 SOD2P04179 222 aa4.88□□□□□ -1.63
FN1-221ENST00000480737 ZC3H6P61129 1189 aaKnown RBP4.88□□□□□ -1.63
FN1-221ENST00000480737 SPIRE1Q08AE8 756 aa4.88□□□□□ -1.63
FN1-221ENST00000480737 NFATC3Q12968 1075 aa4.88□□□□□ -1.63
FN1-221ENST00000480737 TUSC3Q13454 348 aa4.88□□□□□ -1.63
FN1-221ENST00000480737 CD276Q5ZPR3 534 aa4.88□□□□□ -1.63
FN1-221ENST00000480737 VASNQ6EMK4 673 aa4.88□□□□□ -1.63
FN1-221ENST00000480737 TMC5Q6UXY8 1006 aa4.88□□□□□ -1.63
FN1-221ENST00000480737 MAMDC2Q7Z304 686 aaPredicted RBP4.88□□□□□ -1.63
FN1-221ENST00000480737 AJUBAQ96IF1 538 aa4.88□□□□□ -1.63
FN1-221ENST00000480737 C8orf49Q96NF6 230 aa4.88□□□□□ -1.63
FN1-221ENST00000480737 SPATA9Q9BWV2 254 aa4.88□□□□□ -1.63
FN1-221ENST00000480737 CCDC113Q9H0I3 377 aa4.88□□□□□ -1.63
FN1-221ENST00000480737 MEGF9Q9H1U4 602 aa4.88□□□□□ -1.63
FN1-221ENST00000480737 FTSJ1Q9UET6 329 aa4.88□□□□□ -1.63
FN1-221ENST00000480737 ZNF839A8K0R7 811 aa4.87□□□□□ -1.63
FN1-221ENST00000480737 FAM47E-STBD1D6RA91 191 aa4.87□□□□□ -1.63
FN1-221ENST00000480737 GPR42O15529 346 aa4.87□□□□□ -1.63
FN1-221ENST00000480737 CYP1A1P04798 512 aaPredicted RBP4.87□□□□□ -1.63
FN1-221ENST00000480737 C6orf222P0C671 652 aaPredicted RBP4.87□□□□□ -1.63
FN1-221ENST00000480737 GNAT1P11488 350 aa4.87□□□□□ -1.63
FN1-221ENST00000480737 INSRRP14616 1297 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms