RNA–Protein interactions for RNA: ENST00000480563.1

TTC28-206, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 407 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-206ENST00000480563 DLX2Q07687 328 aaPredicted RBP13.16□□□□□ -0.3
TTC28-206ENST00000480563 NMIQ13287 307 aaPredicted RBP13.16□□□□□ -0.3
TTC28-206ENST00000480563 SMAD2Q15796 467 aaKnown RBP13.16□□□□□ -0.3
TTC28-206ENST00000480563 CTC1Q2NKJ3 1217 aa13.16□□□□□ -0.3
TTC28-206ENST00000480563 HERC4Q5GLZ8 1057 aaPredicted RBP13.16□□□□□ -0.3
TTC28-206ENST00000480563 STOX1Q6ZVD7 989 aa13.16□□□□□ -0.3
TTC28-206ENST00000480563 IQCA1Q86XH1 822 aa13.16□□□□□ -0.3
TTC28-206ENST00000480563 ZFP91Q96JP5 570 aaPredicted RBP13.16□□□□□ -0.3
TTC28-206ENST00000480563 POP1Q99575 1024 aaKnown RBP13.16□□□□□ -0.3
TTC28-206ENST00000480563 AMNQ9BXJ7 453 aa13.16□□□□□ -0.3
TTC28-206ENST00000480563 ZBTB47Q9UFB7 747 aaPredicted RBP13.16□□□□□ -0.3
TTC28-206ENST00000480563 MUTYHQ9UIF7 546 aa13.16□□□□□ -0.3
TTC28-206ENST00000480563 NEDD4P46934 1319 aa13.15□□□□□ -0.3
TTC28-206ENST00000480563 CCDC171Q6TFL3 1326 aa13.15□□□□□ -0.3
TTC28-206ENST00000480563 C5orf67F2Z3F1 127 aa13.15□□□□□ -0.3
TTC28-206ENST00000480563 GRM6O15303 877 aa13.15□□□□□ -0.3
TTC28-206ENST00000480563 MBTPS2O43462 519 aa13.15□□□□□ -0.3
TTC28-206ENST00000480563 KDM4AO75164 1064 aa13.15□□□□□ -0.3
TTC28-206ENST00000480563 PARP1P09874 1014 aaKnown RBP13.15□□□□□ -0.3
TTC28-206ENST00000480563 UBA1P22314 1058 aaKnown RBP13.15□□□□□ -0.3
TTC28-206ENST00000480563 BMPR1AP36894 532 aa13.15□□□□□ -0.3
TTC28-206ENST00000480563 GHRHRQ02643 423 aa13.15□□□□□ -0.3
TTC28-206ENST00000480563 HYAL1Q12794 435 aa13.15□□□□□ -0.3
TTC28-206ENST00000480563 PGM5Q15124 567 aa13.15□□□□□ -0.3
TTC28-206ENST00000480563 ANKRD45Q5TZF3 282 aa13.15□□□□□ -0.3
TTC28-206ENST00000480563 TICAM2Q86XR7 235 aa13.15□□□□□ -0.3
TTC28-206ENST00000480563 RNF135Q8IUD6 432 aa13.15□□□□□ -0.3
TTC28-206ENST00000480563 APBB2Q92870 758 aa13.15□□□□□ -0.3
TTC28-206ENST00000480563 GPKOWQ92917 476 aaPredicted RBP eCLIP13.15□□□□□ -0.3
TTC28-206ENST00000480563 SNX27Q96L92 541 aa13.15□□□□□ -0.3
TTC28-206ENST00000480563 ZSCAN10Q96SZ4 725 aaPredicted RBP13.15□□□□□ -0.3
TTC28-206ENST00000480563 LMAN2LQ9H0V9 348 aa13.15□□□□□ -0.3
TTC28-206ENST00000480563 BCAS3Q9H6U6 928 aa13.15□□□□□ -0.3
TTC28-206ENST00000480563 SETD4Q9NVD3 440 aa13.15□□□□□ -0.3
TTC28-206ENST00000480563 MAP3K20Q9NYL2 800 aaKnown RBP13.15□□□□□ -0.3
TTC28-206ENST00000480563 KIAA1217Q5T5P2 1943 aa13.15□□□□□ -0.3
TTC28-206ENST00000480563 MICAL3Q7RTP6 2002 aa13.15□□□□□ -0.3
TTC28-206ENST00000480563 STXBP3O00186 592 aa13.14□□□□□ -0.31
TTC28-206ENST00000480563 LGALS2P05162 132 aa13.14□□□□□ -0.31
TTC28-206ENST00000480563 GNAT1P11488 350 aa13.14□□□□□ -0.31
TTC28-206ENST00000480563 HOXA13P31271 388 aaPredicted RBP13.14□□□□□ -0.31
TTC28-206ENST00000480563 NT5C2P49902 561 aa13.14□□□□□ -0.31
TTC28-206ENST00000480563 PDE1AP54750 535 aa13.14□□□□□ -0.31
TTC28-206ENST00000480563 ENAHQ8N8S7 591 aaPredicted RBP13.14□□□□□ -0.31
TTC28-206ENST00000480563 IL31RAQ8NI17 732 aa13.14□□□□□ -0.31
TTC28-206ENST00000480563 EDAQ92838 391 aa13.14□□□□□ -0.31
TTC28-206ENST00000480563 PHOX2BQ99453 314 aa13.14□□□□□ -0.31
TTC28-206ENST00000480563 C11orf84Q9BUA3 381 aaPredicted RBP13.14□□□□□ -0.31
TTC28-206ENST00000480563 USP26Q9BXU7 913 aa13.14□□□□□ -0.31
TTC28-206ENST00000480563 IGFLR1Q9H665 355 aa13.14□□□□□ -0.31
TTC28-206ENST00000480563 MYO7AQ13402 2215 aa13.14□□□□□ -0.31
TTC28-206ENST00000480563 TRIM6-TRIM34B2RNG4 842 aa13.13□□□□□ -0.31
TTC28-206ENST00000480563 NOP56O00567 594 aaKnown RBP13.13□□□□□ -0.31
TTC28-206ENST00000480563 PPP1R11O60927 126 aaPredicted RBP13.13□□□□□ -0.31
TTC28-206ENST00000480563 LINC00271P0C7V0 271 aa13.13□□□□□ -0.31
TTC28-206ENST00000480563 CCND2P30279 289 aa13.13□□□□□ -0.31
TTC28-206ENST00000480563 GTF2F1P35269 517 aaKnown RBP eCLIP13.13□□□□□ -0.31
TTC28-206ENST00000480563 SMAD4Q13485 552 aaKnown RBP13.13□□□□□ -0.31
TTC28-206ENST00000480563 FAM26DQ5JW98 314 aa13.13□□□□□ -0.31
TTC28-206ENST00000480563 BMP8AQ7Z5Y6 402 aa13.13□□□□□ -0.31
TTC28-206ENST00000480563 STAG2Q8N3U4 1231 aa13.13□□□□□ -0.31
TTC28-206ENST00000480563 SAMD3Q8N6K7 520 aa13.13□□□□□ -0.31
TTC28-206ENST00000480563 ZSWIM5Q9P217 1185 aa13.13□□□□□ -0.31
TTC28-206ENST00000480563 CD207Q9UJ71 328 aa13.13□□□□□ -0.31
TTC28-206ENST00000480563 RWDD3Q9Y3V2 267 aa13.13□□□□□ -0.31
TTC28-206ENST00000480563 PCDHA1Q9Y5I3 950 aa13.13□□□□□ -0.31
TTC28-206ENST00000480563 ZNF318Q5VUA4 2279 aa13.13□□□□□ -0.31
TTC28-206ENST00000480563 COL4A6Q14031 1691 aa13.12□□□□□ -0.31
TTC28-206ENST00000480563 B4E1Z4 1266 aa13.12□□□□□ -0.31
TTC28-206ENST00000480563 KLRF2D3W0D1 207 aa13.12□□□□□ -0.31
TTC28-206ENST00000480563 LINC01565O15544 149 aa13.12□□□□□ -0.31
TTC28-206ENST00000480563 TBX10O75333 385 aa13.12□□□□□ -0.31
TTC28-206ENST00000480563 MFAP1P55081 439 aaKnown RBP13.12□□□□□ -0.31
TTC28-206ENST00000480563 ADAM15Q13444 863 aa13.12□□□□□ -0.31
TTC28-206ENST00000480563 IER5LQ5T953 404 aa13.12□□□□□ -0.31
TTC28-206ENST00000480563 FCHSD1Q86WN1 690 aa13.12□□□□□ -0.31
TTC28-206ENST00000480563 PRSS33Q8NF86 280 aa13.12□□□□□ -0.31
TTC28-206ENST00000480563 MYH7BA7E2Y1 1941 aa13.11□□□□□ -0.31
TTC28-206ENST00000480563 GCOM1H8Y6P7 765 aaPredicted RBP13.11□□□□□ -0.31
TTC28-206ENST00000480563 ENPP3O14638 875 aa13.11□□□□□ -0.31
TTC28-206ENST00000480563 ZBTB5O15062 677 aa13.11□□□□□ -0.31
TTC28-206ENST00000480563 CSPG5O95196 566 aa13.11□□□□□ -0.31
TTC28-206ENST00000480563 CHRNA1P02708 482 aa13.11□□□□□ -0.31
TTC28-206ENST00000480563 POLR2MP0CAP2 368 aa13.11□□□□□ -0.31
TTC28-206ENST00000480563 PTPN5P54829 565 aa13.11□□□□□ -0.31
TTC28-206ENST00000480563 ADAM17P78536 824 aa13.11□□□□□ -0.31
TTC28-206ENST00000480563 ARHGAP4P98171 946 aa13.11□□□□□ -0.31
TTC28-206ENST00000480563 BTG3Q14201 252 aaPredicted RBP13.11□□□□□ -0.31
TTC28-206ENST00000480563 TRIM67Q6ZTA4 783 aa13.11□□□□□ -0.31
TTC28-206ENST00000480563 CYFIP1Q7L576 1253 aa13.11□□□□□ -0.31
TTC28-206ENST00000480563 CLP1Q92989 425 aaKnown RBP13.11□□□□□ -0.31
TTC28-206ENST00000480563 RILPL2Q969X0 211 aa13.11□□□□□ -0.31
TTC28-206ENST00000480563 PBXIP1Q96AQ6 731 aa13.11□□□□□ -0.31
TTC28-206ENST00000480563 MTMR8Q96EF0 704 aa13.11□□□□□ -0.31
TTC28-206ENST00000480563 GPR20Q99678 358 aa13.11□□□□□ -0.31
TTC28-206ENST00000480563 ALG13Q9NP73 1137 aaKnown RBP13.11□□□□□ -0.31
TTC28-206ENST00000480563 ADGRA3Q8IWK6 1321 aa13.11□□□□□ -0.31
TTC28-206ENST00000480563 WDFY4Q6ZS81 3184 aa13.1□□□□□ -0.31
TTC28-206ENST00000480563 TMEM221A6NGB7 291 aa13.1□□□□□ -0.31
TTC28-206ENST00000480563 SPATA31C2B4DYI2 1134 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms