RNA–Protein interactions for RNA: ENST00000480382.1

CCM2-212, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-212ENST00000480382 PRPF38BQ5VTL8 546 aaKnown RBP13.74□□□□□ -0.21
CCM2-212ENST00000480382 KRT25Q7Z3Z0 450 aa13.74□□□□□ -0.21
CCM2-212ENST00000480382 PLA2G4DQ86XP0 818 aa13.74□□□□□ -0.21
CCM2-212ENST00000480382 TBCKQ8TEA7 893 aa13.74□□□□□ -0.21
CCM2-212ENST00000480382 PPP1R13LQ8WUF5 828 aa13.74□□□□□ -0.21
CCM2-212ENST00000480382 SENP7Q9BQF6 1050 aa13.74□□□□□ -0.21
CCM2-212ENST00000480382 MROH7Q68CQ1 1323 aa13.73□□□□□ -0.21
CCM2-212ENST00000480382 MAFGO15525 162 aa13.73□□□□□ -0.21
CCM2-212ENST00000480382 EDIL3O43854 480 aa13.73□□□□□ -0.21
CCM2-212ENST00000480382 KPNA6O60684 536 aa13.73□□□□□ -0.21
CCM2-212ENST00000480382 MMP1P03956 469 aa13.73□□□□□ -0.21
CCM2-212ENST00000480382 HOXD8P13378 290 aaPredicted RBP13.73□□□□□ -0.21
CCM2-212ENST00000480382 KRT2P35908 639 aa13.73□□□□□ -0.21
CCM2-212ENST00000480382 CDK7P50613 346 aa13.73□□□□□ -0.21
CCM2-212ENST00000480382 CHMP4BP1P59074 171 aa13.73□□□□□ -0.21
CCM2-212ENST00000480382 SETQ01105 290 aaPredicted RBP13.73□□□□□ -0.21
CCM2-212ENST00000480382 GUCY1B3Q02153 619 aa13.73□□□□□ -0.21
CCM2-212ENST00000480382 NR5A1Q13285 461 aa13.73□□□□□ -0.21
CCM2-212ENST00000480382 ITGB3BPQ13352 177 aaPredicted RBP13.73□□□□□ -0.21
CCM2-212ENST00000480382 NONOQ15233 471 aaKnown RBP eCLIP13.73□□□□□ -0.21
CCM2-212ENST00000480382 INF2Q27J81 1249 aa13.73□□□□□ -0.21
CCM2-212ENST00000480382 KRT40Q6A162 431 aa13.73□□□□□ -0.21
CCM2-212ENST00000480382 NIPA1Q7RTP0 329 aa13.73□□□□□ -0.21
CCM2-212ENST00000480382 ANKRD33Q7Z3H0 272 aa13.73□□□□□ -0.21
CCM2-212ENST00000480382 FAM184AQ8NB25 1140 aa13.73□□□□□ -0.21
CCM2-212ENST00000480382 SLC43A3Q8NBI5 491 aa13.73□□□□□ -0.21
CCM2-212ENST00000480382 GIMAP8Q8ND71 665 aaPredicted RBP13.73□□□□□ -0.21
CCM2-212ENST00000480382 KAT2BQ92831 832 aa13.73□□□□□ -0.21
CCM2-212ENST00000480382 UIMC1Q96RL1 719 aa13.73□□□□□ -0.21
CCM2-212ENST00000480382 GPR20Q99678 358 aa13.73□□□□□ -0.21
CCM2-212ENST00000480382 AGO4Q9HCK5 861 aaKnown RBP13.73□□□□□ -0.21
CCM2-212ENST00000480382 BRMS1Q9HCU9 246 aa13.73□□□□□ -0.21
CCM2-212ENST00000480382 PRDM5Q9NQX1 630 aaPredicted RBP13.73□□□□□ -0.21
CCM2-212ENST00000480382 PDLIM7Q9NR12 457 aa13.73□□□□□ -0.21
CCM2-212ENST00000480382 CCDC194A0A1B0GVG4 234 aa13.72□□□□□ -0.21
CCM2-212ENST00000480382 FAM205CA6NFA0 338 aa13.72□□□□□ -0.21
CCM2-212ENST00000480382 TDP2O95551 362 aa13.72□□□□□ -0.21
CCM2-212ENST00000480382 F2P00734 622 aa13.72□□□□□ -0.21
CCM2-212ENST00000480382 CLTBP09497 229 aa13.72□□□□□ -0.21
CCM2-212ENST00000480382 CIITAP33076 1130 aa13.72□□□□□ -0.21
CCM2-212ENST00000480382 NBPF20Q3BBV1 942 aa13.72□□□□□ -0.21
CCM2-212ENST00000480382 PRR16Q569H4 304 aa13.72□□□□□ -0.21
CCM2-212ENST00000480382 EARS2Q5JPH6 523 aaKnown RBP13.72□□□□□ -0.21
CCM2-212ENST00000480382 PIK3AP1Q6ZUJ8 805 aa13.72□□□□□ -0.21
CCM2-212ENST00000480382 SH3RF1Q7Z6J0 888 aa13.72□□□□□ -0.21
CCM2-212ENST00000480382 FAM126BQ8IXS8 530 aa13.72□□□□□ -0.21
CCM2-212ENST00000480382 DIS3L2Q8IYB7 885 aaKnown RBP13.72□□□□□ -0.21
CCM2-212ENST00000480382 LENG9Q96B70 501 aa13.72□□□□□ -0.21
CCM2-212ENST00000480382 C8orf76Q96K31 380 aa13.72□□□□□ -0.21
CCM2-212ENST00000480382 SDF4Q9BRK5 362 aa13.72□□□□□ -0.21
CCM2-212ENST00000480382 JPH1Q9HDC5 661 aaPredicted RBP13.72□□□□□ -0.21
CCM2-212ENST00000480382 WDR81Q562E7 1941 aa13.72□□□□□ -0.21
CCM2-212ENST00000480382 NFASCO94856 1347 aa13.71□□□□□ -0.21
CCM2-212ENST00000480382 DCDC2CA8MYV0 355 aa13.71□□□□□ -0.21
CCM2-212ENST00000480382 BTBD18B2RXH4 712 aa13.71□□□□□ -0.21
CCM2-212ENST00000480382 DDX39AO00148 427 aaKnown RBP13.71□□□□□ -0.21
CCM2-212ENST00000480382 PPFIA4O75335 1185 aa13.71□□□□□ -0.21
CCM2-212ENST00000480382 LGALS2P05162 132 aa13.71□□□□□ -0.21
CCM2-212ENST00000480382 PSEN2P49810 448 aa13.71□□□□□ -0.21
CCM2-212ENST00000480382 USP11P51784 963 aa13.71□□□□□ -0.21
CCM2-212ENST00000480382 FAAP100Q0VG06 881 aa13.71□□□□□ -0.21
CCM2-212ENST00000480382 FAM47CQ5HY64 1035 aa13.71□□□□□ -0.21
CCM2-212ENST00000480382 TRIM50Q86XT4 487 aa13.71□□□□□ -0.21
CCM2-212ENST00000480382 TNFRSF25Q93038 417 aa13.71□□□□□ -0.21
CCM2-212ENST00000480382 TOX2Q96NM4 488 aa13.71□□□□□ -0.21
CCM2-212ENST00000480382 ZNF577Q9BSK1 485 aa13.71□□□□□ -0.21
CCM2-212ENST00000480382 C16orf70Q9BSU1 422 aa13.71□□□□□ -0.21
CCM2-212ENST00000480382 KATNAL1Q9BW62 490 aa13.71□□□□□ -0.21
CCM2-212ENST00000480382 SLC9A2Q9UBY0 812 aa13.71□□□□□ -0.21
CCM2-212ENST00000480382 TANC1Q9C0D5 1861 aa13.71□□□□□ -0.21
CCM2-212ENST00000480382 TRIM43BA6NCK2 446 aa13.7□□□□□ -0.22
CCM2-212ENST00000480382 IPO5O00410 1097 aaKnown RBP13.7□□□□□ -0.22
CCM2-212ENST00000480382 TLR3O15455 904 aaKnown RBP13.7□□□□□ -0.22
CCM2-212ENST00000480382 B4GALT4O60513 344 aa13.7□□□□□ -0.22
CCM2-212ENST00000480382 TCF7P36402 384 aaPredicted RBP13.7□□□□□ -0.22
CCM2-212ENST00000480382 MFSD10Q14728 455 aa13.7□□□□□ -0.22
CCM2-212ENST00000480382 KIAA0753Q2KHM9 967 aa13.7□□□□□ -0.22
CCM2-212ENST00000480382 LETM2Q2VYF4 491 aa13.7□□□□□ -0.22
CCM2-212ENST00000480382 UTP14CQ5TAP6 766 aaKnown RBP13.7□□□□□ -0.22
CCM2-212ENST00000480382 NEK8Q86SG6 692 aa13.7□□□□□ -0.22
CCM2-212ENST00000480382 TRIM43Q96BQ3 446 aaPredicted RBP13.7□□□□□ -0.22
CCM2-212ENST00000480382 SEZ6LQ9BYH1 1024 aa13.7□□□□□ -0.22
CCM2-212ENST00000480382 TRPV6Q9H1D0 765 aa13.7□□□□□ -0.22
CCM2-212ENST00000480382 TRMT13Q9NUP7 481 aaKnown RBP13.7□□□□□ -0.22
CCM2-212ENST00000480382 PRKAG2Q9UGJ0 569 aa13.7□□□□□ -0.22
CCM2-212ENST00000480382 RANBP2P49792 3224 aaKnown RBP13.7□□□□□ -0.22
CCM2-212ENST00000480382 TRIP12Q14669 1992 aaPredicted RBP13.69□□□□□ -0.22
CCM2-212ENST00000480382 GSTTP1A0A1W2PQM5 241 aa13.69□□□□□ -0.22
CCM2-212ENST00000480382 HAS3O00219 553 aa13.69□□□□□ -0.22
CCM2-212ENST00000480382 MSH4O15457 936 aa13.69□□□□□ -0.22
CCM2-212ENST00000480382 CD4P01730 458 aa13.69□□□□□ -0.22
CCM2-212ENST00000480382 GJB2P29033 226 aa13.69□□□□□ -0.22
CCM2-212ENST00000480382 ACTR2P61160 394 aa13.69□□□□□ -0.22
CCM2-212ENST00000480382 Q4G0T1 1027 aa13.69□□□□□ -0.22
CCM2-212ENST00000480382 NFRKBQ6P4R8 1299 aa13.69□□□□□ -0.22
CCM2-212ENST00000480382 MOXD1Q6UVY6 613 aa13.69□□□□□ -0.22
CCM2-212ENST00000480382 FBXO18Q8NFZ0 1043 aa13.69□□□□□ -0.22
CCM2-212ENST00000480382 SEPT1Q8WYJ6 367 aa13.69□□□□□ -0.22
CCM2-212ENST00000480382 TMEM39AQ9NV64 488 aa13.69□□□□□ -0.22
CCM2-212ENST00000480382 EMSYQ7Z589 1322 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms