RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 GUCD1Q96NT3 240 aa17.56■□□□□ 0.4
CDK9-203ENST00000480353 SENP7Q9BQF6 1050 aa17.56■□□□□ 0.4
CDK9-203ENST00000480353 RIC8AQ9NPQ8 531 aa17.56■□□□□ 0.4
CDK9-203ENST00000480353 PKD2L1Q9P0L9 805 aa17.56■□□□□ 0.4
CDK9-203ENST00000480353 C17orf102A2RUQ5 167 aa17.55■□□□□ 0.4
CDK9-203ENST00000480353 GRXCR1A8MXD5 290 aa17.55■□□□□ 0.4
CDK9-203ENST00000480353 EPB41L2O43491 1005 aaKnown RBP17.55■□□□□ 0.4
CDK9-203ENST00000480353 PARNO95453 639 aaKnown RBP17.55■□□□□ 0.4
CDK9-203ENST00000480353 GNAT1P11488 350 aa17.55■□□□□ 0.4
CDK9-203ENST00000480353 SELPP16109 830 aa17.55■□□□□ 0.4
CDK9-203ENST00000480353 CDC27P30260 824 aa17.55■□□□□ 0.4
CDK9-203ENST00000480353 ADD1P35611 737 aaKnown RBP17.55■□□□□ 0.4
CDK9-203ENST00000480353 ZNF76P36508 570 aa17.55■□□□□ 0.4
CDK9-203ENST00000480353 PTK7Q13308 1070 aa17.55■□□□□ 0.4
CDK9-203ENST00000480353 TEX2Q8IWB9 1127 aa17.55■□□□□ 0.4
CDK9-203ENST00000480353 CDX2Q99626 313 aaPredicted RBP17.55■□□□□ 0.4
CDK9-203ENST00000480353 BARHL2Q9NY43 387 aa17.55■□□□□ 0.4
CDK9-203ENST00000480353 CXXC1Q9P0U4 656 aaPredicted RBP17.55■□□□□ 0.4
CDK9-203ENST00000480353 CYP46A1Q9Y6A2 500 aa17.55■□□□□ 0.4
CDK9-203ENST00000480353 GBF1Q92538 1859 aa17.54■□□□□ 0.4
CDK9-203ENST00000480353 STXBP3O00186 592 aa17.54■□□□□ 0.4
CDK9-203ENST00000480353 HAS3O00219 553 aa17.54■□□□□ 0.4
CDK9-203ENST00000480353 HOXD8P13378 290 aaPredicted RBP17.54■□□□□ 0.4
CDK9-203ENST00000480353 FOSL2P15408 326 aa17.54■□□□□ 0.4
CDK9-203ENST00000480353 ATP2A2P16615 1042 aaKnown RBP17.54■□□□□ 0.4
CDK9-203ENST00000480353 KCNJ6P48051 423 aa17.54■□□□□ 0.4
CDK9-203ENST00000480353 SEMA3FQ13275 785 aa17.54■□□□□ 0.4
CDK9-203ENST00000480353 RASIP1Q5U651 963 aa17.54■□□□□ 0.4
CDK9-203ENST00000480353 LRRC8DQ7L1W4 858 aa17.54■□□□□ 0.4
CDK9-203ENST00000480353 ATP6V0A1Q93050 837 aa17.54■□□□□ 0.4
CDK9-203ENST00000480353 GPR20Q99678 358 aa17.54■□□□□ 0.4
CDK9-203ENST00000480353 PBX4Q9BYU1 374 aa17.54■□□□□ 0.4
CDK9-203ENST00000480353 ZNF576Q9H609 170 aa17.54■□□□□ 0.4
CDK9-203ENST00000480353 MAFGO15525 162 aa17.53■□□□□ 0.4
CDK9-203ENST00000480353 SMIM10L2AP0DMW4 78 aa17.53■□□□□ 0.4
CDK9-203ENST00000480353 SMIM10L2BP0DMW5 78 aa17.53■□□□□ 0.4
CDK9-203ENST00000480353 SCG2P13521 617 aa17.53■□□□□ 0.4
CDK9-203ENST00000480353 AP3B2Q13367 1082 aa17.53■□□□□ 0.4
CDK9-203ENST00000480353 PFKFB3Q16875 520 aaPredicted RBP17.53■□□□□ 0.4
CDK9-203ENST00000480353 RUFY3Q7L099 469 aa17.53■□□□□ 0.4
CDK9-203ENST00000480353 MYLIPQ8WY64 445 aa17.53■□□□□ 0.4
CDK9-203ENST00000480353 PGBD1Q96JS3 809 aa17.53■□□□□ 0.4
CDK9-203ENST00000480353 SDF4Q9BRK5 362 aa17.53■□□□□ 0.4
CDK9-203ENST00000480353 C16orf70Q9BSU1 422 aa17.53■□□□□ 0.4
CDK9-203ENST00000480353 ANO3Q9BYT9 981 aa17.53■□□□□ 0.4
CDK9-203ENST00000480353 TTYH1Q9H313 450 aaPredicted RBP17.53■□□□□ 0.4
CDK9-203ENST00000480353 BCAS3Q9H6U6 928 aa17.53■□□□□ 0.4
CDK9-203ENST00000480353 SLC28A3Q9HAS3 691 aa17.53■□□□□ 0.4
CDK9-203ENST00000480353 C6orf50Q9HD87 102 aa17.53■□□□□ 0.4
CDK9-203ENST00000480353 CPLX1O14810 134 aa17.52■□□□□ 0.4
CDK9-203ENST00000480353 CKBP12277 381 aa17.52■□□□□ 0.4
CDK9-203ENST00000480353 THPOP40225 353 aa17.52■□□□□ 0.4
CDK9-203ENST00000480353 PBX2P40425 430 aa17.52■□□□□ 0.4
CDK9-203ENST00000480353 CCT2P78371 535 aaKnown RBP17.52■□□□□ 0.4
CDK9-203ENST00000480353 ZNF200P98182 395 aaPredicted RBP17.52■□□□□ 0.4
CDK9-203ENST00000480353 SEPT1Q8WYJ6 367 aa17.52■□□□□ 0.4
CDK9-203ENST00000480353 GLG1Q92896 1179 aa17.52■□□□□ 0.4
CDK9-203ENST00000480353 GAS2L1Q99501 681 aaPredicted RBP17.52■□□□□ 0.4
CDK9-203ENST00000480353 JADE2Q9NQC1 790 aa17.52■□□□□ 0.4
CDK9-203ENST00000480353 FAM217BQ9NTX9 383 aaPredicted RBP17.52■□□□□ 0.4
CDK9-203ENST00000480353 UBIAD1Q9Y5Z9 338 aa17.52■□□□□ 0.4
CDK9-203ENST00000480353 KIF28PB7ZC32 967 aa17.51■□□□□ 0.39
CDK9-203ENST00000480353 BAIAP3O94812 1187 aa17.51■□□□□ 0.39
CDK9-203ENST00000480353 ITGB5P18084 799 aa17.51■□□□□ 0.39
CDK9-203ENST00000480353 GNA11P29992 359 aa17.51■□□□□ 0.39
CDK9-203ENST00000480353 TCF7P36402 384 aaPredicted RBP17.51■□□□□ 0.39
CDK9-203ENST00000480353 FUT2Q10981 343 aa17.51■□□□□ 0.39
CDK9-203ENST00000480353 JAKMIP3Q5VZ66 844 aa17.51■□□□□ 0.39
CDK9-203ENST00000480353 MCTP2Q6DN12 878 aa17.51■□□□□ 0.39
CDK9-203ENST00000480353 TYW1BQ6NUM6 668 aa17.51■□□□□ 0.39
CDK9-203ENST00000480353 CPLX2Q6PUV4 134 aaKnown RBP17.51■□□□□ 0.39
CDK9-203ENST00000480353 TRIM22Q8IYM9 498 aa17.51■□□□□ 0.39
CDK9-203ENST00000480353 FBXL16Q8N461 479 aa17.51■□□□□ 0.39
CDK9-203ENST00000480353 CCDC148Q8NFR7 591 aa17.51■□□□□ 0.39
CDK9-203ENST00000480353 BICD2Q8TD16 824 aa17.51■□□□□ 0.39
CDK9-203ENST00000480353 PHKBQ93100 1093 aa17.51■□□□□ 0.39
CDK9-203ENST00000480353 SLC9A7Q96T83 725 aa17.51■□□□□ 0.39
CDK9-203ENST00000480353 MXRA8Q9BRK3 442 aa17.51■□□□□ 0.39
CDK9-203ENST00000480353 SLC26A6Q9BXS9 759 aa17.51■□□□□ 0.39
CDK9-203ENST00000480353 NKX2-4Q9H2Z4 354 aa17.51■□□□□ 0.39
CDK9-203ENST00000480353 AZI2Q9H6S1 392 aa17.51■□□□□ 0.39
CDK9-203ENST00000480353 PRPF3O43395 683 aaKnown RBP17.5■□□□□ 0.39
CDK9-203ENST00000480353 EIF5BO60841 1220 aaKnown RBP17.5■□□□□ 0.39
CDK9-203ENST00000480353 KCNA2P16389 499 aa17.5■□□□□ 0.39
CDK9-203ENST00000480353 RABGGTBP53611 331 aa17.5■□□□□ 0.39
CDK9-203ENST00000480353 ARHGAP4P98171 946 aa17.5■□□□□ 0.39
CDK9-203ENST00000480353 PPP2R2DQ66LE6 453 aa17.5■□□□□ 0.39
CDK9-203ENST00000480353 TRIM50Q86XT4 487 aa17.5■□□□□ 0.39
CDK9-203ENST00000480353 DHX38Q92620 1227 aaKnown RBP17.5■□□□□ 0.39
CDK9-203ENST00000480353 ZSWIM6Q9HCJ5 1215 aa17.5■□□□□ 0.39
CDK9-203ENST00000480353 JPH1Q9HDC5 661 aaPredicted RBP17.5■□□□□ 0.39
CDK9-203ENST00000480353 TMEM260Q9NX78 707 aa17.5■□□□□ 0.39
CDK9-203ENST00000480353 TCEAL9Q9UHQ7 104 aa17.5■□□□□ 0.39
CDK9-203ENST00000480353 LAMA2P24043 3122 aaKnown RBP17.5■□□□□ 0.39
CDK9-203ENST00000480353 EMSYQ7Z589 1322 aa17.49■□□□□ 0.39
CDK9-203ENST00000480353 ATP9AO75110 1047 aa17.49■□□□□ 0.39
CDK9-203ENST00000480353 MARK3P27448 753 aa17.49■□□□□ 0.39
CDK9-203ENST00000480353 SSRP1Q08945 709 aaKnown RBP17.49■□□□□ 0.39
CDK9-203ENST00000480353 RBL2Q08999 1139 aa17.49■□□□□ 0.39
CDK9-203ENST00000480353 GRIN2CQ14957 1233 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms