RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 SAMD11Q96NU1 681 aa8.2□□□□□ -1.1
COL17A1-205ENST00000480127 IWS1Q96ST2 819 aa8.2□□□□□ -1.1
COL17A1-205ENST00000480127 KATNAL1Q9BW62 490 aa8.2□□□□□ -1.1
COL17A1-205ENST00000480127 OSBPL7Q9BZF2 842 aa8.2□□□□□ -1.1
COL17A1-205ENST00000480127 KCNH6Q9H252 994 aa8.2□□□□□ -1.1
COL17A1-205ENST00000480127 OSBPL3Q9H4L5 887 aa8.2□□□□□ -1.1
COL17A1-205ENST00000480127 ZSWIM5Q9P217 1185 aa8.2□□□□□ -1.1
COL17A1-205ENST00000480127 NAP1L2Q9ULW6 460 aaPredicted RBP8.2□□□□□ -1.1
COL17A1-205ENST00000480127 PCDHA1Q9Y5I3 950 aa8.2□□□□□ -1.1
COL17A1-205ENST00000480127 CCDC69A6NI79 296 aa8.19□□□□□ -1.1
COL17A1-205ENST00000480127 RSPH10B2B2RC85 870 aa8.19□□□□□ -1.1
COL17A1-205ENST00000480127 GCOM1H8Y6P7 765 aaPredicted RBP8.19□□□□□ -1.1
COL17A1-205ENST00000480127 PPFIA4O75335 1185 aa8.19□□□□□ -1.1
COL17A1-205ENST00000480127 EIF3JO75822 258 aaKnown RBP8.19□□□□□ -1.1
COL17A1-205ENST00000480127 RGS20O76081 388 aa8.19□□□□□ -1.1
COL17A1-205ENST00000480127 NR3C2P08235 984 aa8.19□□□□□ -1.1
COL17A1-205ENST00000480127 RSPH10BP0C881 870 aa8.19□□□□□ -1.1
COL17A1-205ENST00000480127 POLR2MP0CAP2 368 aa8.19□□□□□ -1.1
COL17A1-205ENST00000480127 CCND2P30279 289 aa8.19□□□□□ -1.1
COL17A1-205ENST00000480127 KIF5BP33176 963 aa8.19□□□□□ -1.1
COL17A1-205ENST00000480127 IRS1P35568 1242 aa8.19□□□□□ -1.1
COL17A1-205ENST00000480127 LTBRP36941 435 aa8.19□□□□□ -1.1
COL17A1-205ENST00000480127 THPOP40225 353 aa8.19□□□□□ -1.1
COL17A1-205ENST00000480127 GPM6BQ13491 265 aa8.19□□□□□ -1.1
COL17A1-205ENST00000480127 LAMC2Q13753 1193 aa8.19□□□□□ -1.1
COL17A1-205ENST00000480127 GNPTABQ3T906 1256 aa8.19□□□□□ -1.1
COL17A1-205ENST00000480127 TIGD5Q53EQ6 642 aa8.19□□□□□ -1.1
COL17A1-205ENST00000480127 SYNE3Q6ZMZ3 975 aa8.19□□□□□ -1.1
COL17A1-205ENST00000480127 HFE2Q6ZVN8 426 aa8.19□□□□□ -1.1
COL17A1-205ENST00000480127 SERINC5Q86VE9 423 aa8.19□□□□□ -1.1
COL17A1-205ENST00000480127 ADHFE1Q8IWW8 467 aa8.19□□□□□ -1.1
COL17A1-205ENST00000480127 TOP1MTQ969P6 601 aa8.19□□□□□ -1.1
COL17A1-205ENST00000480127 MLXIPQ9HAP2 919 aa8.19□□□□□ -1.1
COL17A1-205ENST00000480127 PRKAG3Q9UGI9 489 aa8.19□□□□□ -1.1
COL17A1-205ENST00000480127 EMSYQ7Z589 1322 aa8.19□□□□□ -1.1
COL17A1-205ENST00000480127 COL4A6Q14031 1691 aa8.18□□□□□ -1.1
COL17A1-205ENST00000480127 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.18□□□□□ -1.1
COL17A1-205ENST00000480127 OPLAHO14841 1288 aa8.18□□□□□ -1.1
COL17A1-205ENST00000480127 ZBTB5O15062 677 aa8.18□□□□□ -1.1
COL17A1-205ENST00000480127 LINC00271P0C7V0 271 aa8.18□□□□□ -1.1
COL17A1-205ENST00000480127 HOXA13P31271 388 aaPredicted RBP8.18□□□□□ -1.1
COL17A1-205ENST00000480127 HOXC8P31273 242 aa8.18□□□□□ -1.1
COL17A1-205ENST00000480127 CTC1Q2NKJ3 1217 aa8.18□□□□□ -1.1
COL17A1-205ENST00000480127 HSDL1Q3SXM5 330 aa8.18□□□□□ -1.1
COL17A1-205ENST00000480127 MYSM1Q5VVJ2 828 aa8.18□□□□□ -1.1
COL17A1-205ENST00000480127 TMEM192Q8IY95 271 aa8.18□□□□□ -1.1
COL17A1-205ENST00000480127 SMARCC2Q8TAQ2 1214 aa8.18□□□□□ -1.1
COL17A1-205ENST00000480127 RRP36Q96EU6 259 aaKnown RBP8.18□□□□□ -1.1
COL17A1-205ENST00000480127 SPATA33Q96N06 139 aa8.18□□□□□ -1.1
COL17A1-205ENST00000480127 YME1L1Q96TA2 773 aa8.18□□□□□ -1.1
COL17A1-205ENST00000480127 C16orf70Q9BSU1 422 aa8.18□□□□□ -1.1
COL17A1-205ENST00000480127 NSUN3Q9H649 340 aaKnown RBP8.18□□□□□ -1.1
COL17A1-205ENST00000480127 JMJD4Q9H9V9 463 aa8.18□□□□□ -1.1
COL17A1-205ENST00000480127 PXMP2Q9NR77 195 aa8.18□□□□□ -1.1
COL17A1-205ENST00000480127 KIAA1217Q5T5P2 1943 aa8.17□□□□□ -1.1
COL17A1-205ENST00000480127 TREHO43280 583 aa8.17□□□□□ -1.1
COL17A1-205ENST00000480127 UPP2O95045 317 aa8.17□□□□□ -1.1
COL17A1-205ENST00000480127 CHMLP26374 656 aa8.17□□□□□ -1.1
COL17A1-205ENST00000480127 HSD17B4P51659 736 aa8.17□□□□□ -1.1
COL17A1-205ENST00000480127 SP2Q02086 613 aa8.17□□□□□ -1.1
COL17A1-205ENST00000480127 SP4Q02446 784 aa8.17□□□□□ -1.1
COL17A1-205ENST00000480127 GHRHRQ02643 423 aa8.17□□□□□ -1.1
COL17A1-205ENST00000480127 DLX2Q07687 328 aaPredicted RBP8.17□□□□□ -1.1
COL17A1-205ENST00000480127 SMAD2Q15796 467 aaKnown RBP8.17□□□□□ -1.1
COL17A1-205ENST00000480127 CELF3Q5SZQ8 465 aaKnown RBP8.17□□□□□ -1.1
COL17A1-205ENST00000480127 RNF20Q5VTR2 975 aa8.17□□□□□ -1.1
COL17A1-205ENST00000480127 KCNV1Q6PIU1 500 aa8.17□□□□□ -1.1
COL17A1-205ENST00000480127 EP400NLQ6ZTU2 488 aa8.17□□□□□ -1.1
COL17A1-205ENST00000480127 RPAINQ86UA6 219 aa8.17□□□□□ -1.1
COL17A1-205ENST00000480127 STAG2Q8N3U4 1231 aa8.17□□□□□ -1.1
COL17A1-205ENST00000480127 SEPT8Q92599 483 aa8.17□□□□□ -1.1
COL17A1-205ENST00000480127 ATP6V0A1Q93050 837 aa8.17□□□□□ -1.1
COL17A1-205ENST00000480127 PHOX2BQ99453 314 aa8.17□□□□□ -1.1
COL17A1-205ENST00000480127 PDCD2LQ9BRP1 358 aa8.17□□□□□ -1.1
COL17A1-205ENST00000480127 ANO2Q9NQ90 1003 aa8.17□□□□□ -1.1
COL17A1-205ENST00000480127 CLDND1Q9NY35 253 aa8.17□□□□□ -1.1
COL17A1-205ENST00000480127 FAM50BQ9Y247 325 aa8.17□□□□□ -1.1
COL17A1-205ENST00000480127 MICAL3Q7RTP6 2002 aa8.17□□□□□ -1.1
COL17A1-205ENST00000480127 C17orf102A2RUQ5 167 aa8.16□□□□□ -1.1
COL17A1-205ENST00000480127 E7EWF7 191 aa8.16□□□□□ -1.1
COL17A1-205ENST00000480127 C5orf67F2Z3F1 127 aa8.16□□□□□ -1.1
COL17A1-205ENST00000480127 MBTPS2O43462 519 aa8.16□□□□□ -1.1
COL17A1-205ENST00000480127 GGPS1O95749 300 aa8.16□□□□□ -1.1
COL17A1-205ENST00000480127 SMIM10L2AP0DMW4 78 aa8.16□□□□□ -1.1
COL17A1-205ENST00000480127 SMIM10L2BP0DMW5 78 aa8.16□□□□□ -1.1
COL17A1-205ENST00000480127 UBA1P22314 1058 aaKnown RBP8.16□□□□□ -1.1
COL17A1-205ENST00000480127 MCM5P33992 734 aa8.16□□□□□ -1.1
COL17A1-205ENST00000480127 GNAQP50148 359 aa8.16□□□□□ -1.1
COL17A1-205ENST00000480127 HYAL1Q12794 435 aa8.16□□□□□ -1.1
COL17A1-205ENST00000480127 HERC4Q5GLZ8 1057 aaPredicted RBP8.16□□□□□ -1.1
COL17A1-205ENST00000480127 STOX1Q6ZVD7 989 aa8.16□□□□□ -1.1
COL17A1-205ENST00000480127 CYB5R4Q7L1T6 521 aa8.16□□□□□ -1.1
COL17A1-205ENST00000480127 VSIG10LQ86VR7 867 aa8.16□□□□□ -1.1
COL17A1-205ENST00000480127 IL31RAQ8NI17 732 aa8.16□□□□□ -1.1
COL17A1-205ENST00000480127 GPKOWQ92917 476 aaPredicted RBP eCLIP8.16□□□□□ -1.1
COL17A1-205ENST00000480127 SNX27Q96L92 541 aa8.16□□□□□ -1.1
COL17A1-205ENST00000480127 MFSD14AQ96MC6 490 aa8.16□□□□□ -1.1
COL17A1-205ENST00000480127 PIGSQ96S52 555 aa8.16□□□□□ -1.1
COL17A1-205ENST00000480127 UPF3BQ9BZI7 483 aaKnown RBP8.16□□□□□ -1.1
COL17A1-205ENST00000480127 RNPEPQ9H4A4 650 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms