RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 NRLP54845 237 aa5.79□□□□□ -1.48
PTCD3-213ENST00000480102 HMGCS2P54868 508 aa5.79□□□□□ -1.48
PTCD3-213ENST00000480102 HERVK_113P62684 666 aa5.79□□□□□ -1.48
PTCD3-213ENST00000480102 ICA1Q05084 483 aa5.79□□□□□ -1.48
PTCD3-213ENST00000480102 PPARAQ07869 468 aa5.79□□□□□ -1.48
PTCD3-213ENST00000480102 KCNA1Q09470 495 aa5.79□□□□□ -1.48
PTCD3-213ENST00000480102 COG2Q14746 738 aa5.79□□□□□ -1.48
PTCD3-213ENST00000480102 PWP2Q15269 919 aaKnown RBP5.79□□□□□ -1.48
PTCD3-213ENST00000480102 DGKHQ86XP1 1220 aa5.79□□□□□ -1.48
PTCD3-213ENST00000480102 NUDT8Q8WV74 236 aa5.79□□□□□ -1.48
PTCD3-213ENST00000480102 STAG1Q8WVM7 1258 aa5.79□□□□□ -1.48
PTCD3-213ENST00000480102 USP6NLQ92738 828 aa5.79□□□□□ -1.48
PTCD3-213ENST00000480102 SPOCK3Q9BQ16 436 aa5.79□□□□□ -1.48
PTCD3-213ENST00000480102 LPIN3Q9BQK8 851 aa5.79□□□□□ -1.48
PTCD3-213ENST00000480102 R3HDMLQ9H3Y0 253 aa5.79□□□□□ -1.48
PTCD3-213ENST00000480102 FRRS1LQ9P0K9 344 aa5.79□□□□□ -1.48
PTCD3-213ENST00000480102 DIS3Q9Y2L1 958 aaKnown RBP5.79□□□□□ -1.48
PTCD3-213ENST00000480102 A0A0D9SFI3 127 aa5.78□□□□□ -1.48
PTCD3-213ENST00000480102 A0A1W2PRG0 241 aa5.78□□□□□ -1.48
PTCD3-213ENST00000480102 M0R2C6 588 aa5.78□□□□□ -1.48
PTCD3-213ENST00000480102 MSTNO14793 375 aa5.78□□□□□ -1.48
PTCD3-213ENST00000480102 SGSM2O43147 1006 aa5.78□□□□□ -1.48
PTCD3-213ENST00000480102 MMP20O60882 483 aa5.78□□□□□ -1.48
PTCD3-213ENST00000480102 RGS9O75916 674 aaPredicted RBP5.78□□□□□ -1.48
PTCD3-213ENST00000480102 SLC25A27O95847 323 aa5.78□□□□□ -1.48
PTCD3-213ENST00000480102 SNHG28P0DPA3 235 aa5.78□□□□□ -1.48
PTCD3-213ENST00000480102 HOXD8P13378 290 aaPredicted RBP5.78□□□□□ -1.48
PTCD3-213ENST00000480102 GSPT1P15170 499 aaKnown RBP5.78□□□□□ -1.48
PTCD3-213ENST00000480102 SOX18P35713 384 aa5.78□□□□□ -1.48
PTCD3-213ENST00000480102 TDO2P48775 406 aa5.78□□□□□ -1.48
PTCD3-213ENST00000480102 AFF1P51825 1210 aaKnown RBP5.78□□□□□ -1.48
PTCD3-213ENST00000480102 IRX3P78415 501 aaPredicted RBP5.78□□□□□ -1.48
PTCD3-213ENST00000480102 MLLT1Q03111 559 aaPredicted RBP5.78□□□□□ -1.48
PTCD3-213ENST00000480102 PLAURQ03405 335 aa5.78□□□□□ -1.48
PTCD3-213ENST00000480102 TREML2Q5T2D2 321 aa5.78□□□□□ -1.48
PTCD3-213ENST00000480102 TSHZ3Q63HK5 1081 aa5.78□□□□□ -1.48
PTCD3-213ENST00000480102 B4GALNT3Q6L9W6 998 aa5.78□□□□□ -1.48
PTCD3-213ENST00000480102 PHLDB3Q6NSJ2 640 aa5.78□□□□□ -1.48
PTCD3-213ENST00000480102 ZNF444Q8N0Y2 327 aaPredicted RBP5.78□□□□□ -1.48
PTCD3-213ENST00000480102 MSL3Q8N5Y2 521 aaKnown RBP5.78□□□□□ -1.48
PTCD3-213ENST00000480102 GPRC5AQ8NFJ5 357 aa5.78□□□□□ -1.48
PTCD3-213ENST00000480102 GPR152Q8TDT2 470 aa5.78□□□□□ -1.48
PTCD3-213ENST00000480102 COA7Q96BR5 231 aa5.78□□□□□ -1.48
PTCD3-213ENST00000480102 ZNF333Q96JL9 665 aa5.78□□□□□ -1.48
PTCD3-213ENST00000480102 MROH8Q9H579 483 aa5.78□□□□□ -1.48
PTCD3-213ENST00000480102 CNNM2Q9H8M5 875 aa5.78□□□□□ -1.48
PTCD3-213ENST00000480102 MKNK2Q9HBH9 465 aa5.78□□□□□ -1.48
PTCD3-213ENST00000480102 DIAPH3Q9NSV4 1193 aa5.78□□□□□ -1.48
PTCD3-213ENST00000480102 RBPJLQ9UBG7 517 aa5.78□□□□□ -1.48
PTCD3-213ENST00000480102 SAP30BPQ9UHR5 308 aaKnown RBP5.78□□□□□ -1.48
PTCD3-213ENST00000480102 F5H6K3 240 aa5.77□□□□□ -1.49
PTCD3-213ENST00000480102 CHGBP05060 677 aa5.77□□□□□ -1.49
PTCD3-213ENST00000480102 APPP05067 770 aa5.77□□□□□ -1.49
PTCD3-213ENST00000480102 CENPBP07199 599 aaPredicted RBP5.77□□□□□ -1.49
PTCD3-213ENST00000480102 PSAPP07602 524 aa5.77□□□□□ -1.49
PTCD3-213ENST00000480102 TSPY3P0CV98 308 aa5.77□□□□□ -1.49
PTCD3-213ENST00000480102 TSPY8P0CW00 308 aa5.77□□□□□ -1.49
PTCD3-213ENST00000480102 CYP2C8P10632 490 aa5.77□□□□□ -1.49
PTCD3-213ENST00000480102 EEF2P13639 858 aaKnown RBP5.77□□□□□ -1.49
PTCD3-213ENST00000480102 AKR1B1P15121 316 aa5.77□□□□□ -1.49
PTCD3-213ENST00000480102 CHMLP26374 656 aa5.77□□□□□ -1.49
PTCD3-213ENST00000480102 CHRNA4P43681 627 aa5.77□□□□□ -1.49
PTCD3-213ENST00000480102 PSMC4P43686 418 aa5.77□□□□□ -1.49
PTCD3-213ENST00000480102 ERVK-24P63145 666 aa5.77□□□□□ -1.49
PTCD3-213ENST00000480102 KLRC3Q07444 240 aa5.77□□□□□ -1.49
PTCD3-213ENST00000480102 NMIQ13287 307 aaPredicted RBP5.77□□□□□ -1.49
PTCD3-213ENST00000480102 SEPT2Q15019 361 aa5.77□□□□□ -1.49
PTCD3-213ENST00000480102 RAB3GAP1Q15042 981 aa5.77□□□□□ -1.49
PTCD3-213ENST00000480102 IMMTQ16891 758 aaKnown RBP5.77□□□□□ -1.49
PTCD3-213ENST00000480102 PRRT3Q5FWE3 981 aa5.77□□□□□ -1.49
PTCD3-213ENST00000480102 PERM1Q5SV97 790 aa5.77□□□□□ -1.49
PTCD3-213ENST00000480102 AKNAD1Q5T1N1 836 aa5.77□□□□□ -1.49
PTCD3-213ENST00000480102 MAP3K21Q5TCX8 1036 aa5.77□□□□□ -1.49
PTCD3-213ENST00000480102 BTNL9Q6UXG8 535 aa5.77□□□□□ -1.49
PTCD3-213ENST00000480102 GADL1Q6ZQY3 521 aa5.77□□□□□ -1.49
PTCD3-213ENST00000480102 CD163Q86VB7 1156 aa5.77□□□□□ -1.49
PTCD3-213ENST00000480102 ATCAYQ86WG3 371 aa5.77□□□□□ -1.49
PTCD3-213ENST00000480102 PRPF38AQ8NAV1 312 aaKnown RBP5.77□□□□□ -1.49
PTCD3-213ENST00000480102 ESR2Q92731 530 aa5.77□□□□□ -1.49
PTCD3-213ENST00000480102 MAP4K1Q92918 833 aa5.77□□□□□ -1.49
PTCD3-213ENST00000480102 DYNLL2Q96FJ2 89 aa5.77□□□□□ -1.49
PTCD3-213ENST00000480102 FAM227BQ96M60 508 aa5.77□□□□□ -1.49
PTCD3-213ENST00000480102 SEC62Q99442 399 aaKnown RBP5.77□□□□□ -1.49
PTCD3-213ENST00000480102 MAP3K14Q99558 947 aa5.77□□□□□ -1.49
PTCD3-213ENST00000480102 P2RX7Q99572 595 aaKnown RBP5.77□□□□□ -1.49
PTCD3-213ENST00000480102 FEZ1Q99689 392 aa5.77□□□□□ -1.49
PTCD3-213ENST00000480102 KRT23Q9C075 422 aa5.77□□□□□ -1.49
PTCD3-213ENST00000480102 GJD2Q9UKL4 321 aa5.77□□□□□ -1.49
PTCD3-213ENST00000480102 PPP1R9AQ9ULJ8 1098 aa5.77□□□□□ -1.49
PTCD3-213ENST00000480102 FNDC3AQ9Y2H6 1198 aaKnown RBP5.77□□□□□ -1.49
PTCD3-213ENST00000480102 TRIM17Q9Y577 477 aa5.77□□□□□ -1.49
PTCD3-213ENST00000480102 BRCA2P51587 3418 aa5.77□□□□□ -1.49
PTCD3-213ENST00000480102 SLC15A5A6NIM6 579 aa5.76□□□□□ -1.49
PTCD3-213ENST00000480102 C1QTNF9BB2RNN3 333 aa5.76□□□□□ -1.49
PTCD3-213ENST00000480102 FAM229AH3BQW9 127 aa5.76□□□□□ -1.49
PTCD3-213ENST00000480102 ZNF213O14771 459 aa5.76□□□□□ -1.49
PTCD3-213ENST00000480102 MSCO60682 206 aa5.76□□□□□ -1.49
PTCD3-213ENST00000480102 GJB1P08034 283 aa5.76□□□□□ -1.49
PTCD3-213ENST00000480102 CYP2D6P10635 497 aa5.76□□□□□ -1.49
PTCD3-213ENST00000480102 TOP1P11387 765 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms