RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 Q7L0L9 218 aa10.41□□□□□ -0.74
CMTM1-208ENST00000479381 DEFB128Q7Z7B8 93 aa10.41□□□□□ -0.74
CMTM1-208ENST00000479381 RPUSD2Q8IZ73 545 aaKnown RBP10.41□□□□□ -0.74
CMTM1-208ENST00000479381 CCDC12Q8WUD4 166 aaPredicted RBP10.41□□□□□ -0.74
CMTM1-208ENST00000479381 FTOQ9C0B1 505 aaKnown RBP eCLIP10.41□□□□□ -0.74
CMTM1-208ENST00000479381 TBX21Q9UL17 535 aa10.41□□□□□ -0.74
CMTM1-208ENST00000479381 BRPF3Q9ULD4 1205 aa10.41□□□□□ -0.74
CMTM1-208ENST00000479381 CYP46A1Q9Y6A2 500 aa10.41□□□□□ -0.74
CMTM1-208ENST00000479381 V9GY48 417 aaPredicted RBP10.41□□□□□ -0.74
CMTM1-208ENST00000479381 SMCO2A6NFE2 343 aa10.4□□□□□ -0.74
CMTM1-208ENST00000479381 A6NJR5 290 aa10.4□□□□□ -0.74
CMTM1-208ENST00000479381 EIF5BO60841 1220 aaKnown RBP10.4□□□□□ -0.74
CMTM1-208ENST00000479381 PPFIA3O75145 1194 aa10.4□□□□□ -0.74
CMTM1-208ENST00000479381 NUDT7P0C024 238 aa10.4□□□□□ -0.74
CMTM1-208ENST00000479381 ACTN1P12814 892 aa10.4□□□□□ -0.74
CMTM1-208ENST00000479381 NKX3-2P78367 333 aa10.4□□□□□ -0.74
CMTM1-208ENST00000479381 EXOSC10Q01780 885 aaKnown RBP10.4□□□□□ -0.74
CMTM1-208ENST00000479381 STK3Q13188 491 aa10.4□□□□□ -0.74
CMTM1-208ENST00000479381 BFSP2Q13515 415 aa10.4□□□□□ -0.74
CMTM1-208ENST00000479381 COL9A3Q14050 684 aaPredicted RBP10.4□□□□□ -0.74
CMTM1-208ENST00000479381 MFSD10Q14728 455 aa10.4□□□□□ -0.74
CMTM1-208ENST00000479381 KIAA0753Q2KHM9 967 aa10.4□□□□□ -0.74
CMTM1-208ENST00000479381 TSGA10IPQ3SY00 556 aa10.4□□□□□ -0.74
CMTM1-208ENST00000479381 CELF3Q5SZQ8 465 aaKnown RBP10.4□□□□□ -0.74
CMTM1-208ENST00000479381 WWC2Q6AWC2 1192 aa10.4□□□□□ -0.74
CMTM1-208ENST00000479381 NFRKBQ6P4R8 1299 aa10.4□□□□□ -0.74
CMTM1-208ENST00000479381 CCDC62Q6P9F0 684 aa10.4□□□□□ -0.74
CMTM1-208ENST00000479381 CYFIP1Q7L576 1253 aa10.4□□□□□ -0.74
CMTM1-208ENST00000479381 VSIG10LQ86VR7 867 aa10.4□□□□□ -0.74
CMTM1-208ENST00000479381 TRIM22Q8IYM9 498 aa10.4□□□□□ -0.74
CMTM1-208ENST00000479381 PPTC7Q8NI37 304 aa10.4□□□□□ -0.74
CMTM1-208ENST00000479381 KHSRPQ92945 711 aaKnown RBP eCLIP10.4□□□□□ -0.74
CMTM1-208ENST00000479381 SCLYQ96I15 445 aa10.4□□□□□ -0.74
CMTM1-208ENST00000479381 CDHR1Q96JP9 859 aa10.4□□□□□ -0.74
CMTM1-208ENST00000479381 PGBD1Q96JS3 809 aa10.4□□□□□ -0.74
CMTM1-208ENST00000479381 SLC26A6Q9BXS9 759 aa10.4□□□□□ -0.74
CMTM1-208ENST00000479381 ZNF215Q9UL58 517 aaPredicted RBP10.4□□□□□ -0.74
CMTM1-208ENST00000479381 PCDHA6Q9UN73 950 aa10.4□□□□□ -0.74
CMTM1-208ENST00000479381 PCDHA8Q9Y5H6 950 aa10.4□□□□□ -0.74
CMTM1-208ENST00000479381 UMODL1Q5DID0 1318 aa10.39□□□□□ -0.75
CMTM1-208ENST00000479381 hCG_1984214I3L0E3 225 aa10.39□□□□□ -0.75
CMTM1-208ENST00000479381 CD4P01730 458 aa10.39□□□□□ -0.75
CMTM1-208ENST00000479381 FGBP02675 491 aa10.39□□□□□ -0.75
CMTM1-208ENST00000479381 TGFB3P10600 412 aa10.39□□□□□ -0.75
CMTM1-208ENST00000479381 ADD1P35611 737 aaKnown RBP10.39□□□□□ -0.75
CMTM1-208ENST00000479381 PTPN11Q06124 597 aaPredicted RBP10.39□□□□□ -0.75
CMTM1-208ENST00000479381 MTMR1Q13613 665 aa10.39□□□□□ -0.75
CMTM1-208ENST00000479381 VARS2Q5ST30 1063 aaKnown RBP10.39□□□□□ -0.75
CMTM1-208ENST00000479381 JAKMIP3Q5VZ66 844 aa10.39□□□□□ -0.75
CMTM1-208ENST00000479381 PCNX4Q63HM2 1172 aa10.39□□□□□ -0.75
CMTM1-208ENST00000479381 PPP1R18Q6NYC8 613 aa10.39□□□□□ -0.75
CMTM1-208ENST00000479381 OTOP2Q7RTS6 562 aa10.39□□□□□ -0.75
CMTM1-208ENST00000479381 ZNF713Q8N859 430 aaPredicted RBP10.39□□□□□ -0.75
CMTM1-208ENST00000479381 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.39□□□□□ -0.75
CMTM1-208ENST00000479381 UPF3BQ9BZI7 483 aaKnown RBP10.39□□□□□ -0.75
CMTM1-208ENST00000479381 GLT8D2Q9H1C3 349 aa10.39□□□□□ -0.75
CMTM1-208ENST00000479381 C6orf50Q9HD87 102 aa10.39□□□□□ -0.75
CMTM1-208ENST00000479381 IL23AQ9NPF7 189 aa10.39□□□□□ -0.75
CMTM1-208ENST00000479381 PDRG1Q9NUG6 133 aa10.39□□□□□ -0.75
CMTM1-208ENST00000479381 DOCK5Q9H7D0 1870 aa10.38□□□□□ -0.75
CMTM1-208ENST00000479381 GRIN2DO15399 1336 aa10.38□□□□□ -0.75
CMTM1-208ENST00000479381 C17orf102A2RUQ5 167 aa10.38□□□□□ -0.75
CMTM1-208ENST00000479381 PIK3CDO00329 1044 aa10.38□□□□□ -0.75
CMTM1-208ENST00000479381 MEIS2O14770 477 aa10.38□□□□□ -0.75
CMTM1-208ENST00000479381 SCG2P13521 617 aa10.38□□□□□ -0.75
CMTM1-208ENST00000479381 CDC27P30260 824 aa10.38□□□□□ -0.75
CMTM1-208ENST00000479381 RCAN1P53805 252 aa10.38□□□□□ -0.75
CMTM1-208ENST00000479381 EPHB4P54760 987 aa10.38□□□□□ -0.75
CMTM1-208ENST00000479381 GHRHRQ02643 423 aa10.38□□□□□ -0.75
CMTM1-208ENST00000479381 HSDL1Q3SXM5 330 aa10.38□□□□□ -0.75
CMTM1-208ENST00000479381 MYSM1Q5VVJ2 828 aa10.38□□□□□ -0.75
CMTM1-208ENST00000479381 XRRA1Q6P2D8 792 aa10.38□□□□□ -0.75
CMTM1-208ENST00000479381 ZNF365Q70YC5 407 aa10.38□□□□□ -0.75
CMTM1-208ENST00000479381 RUFY3Q7L099 469 aa10.38□□□□□ -0.75
CMTM1-208ENST00000479381 SLC43A3Q8NBI5 491 aa10.38□□□□□ -0.75
CMTM1-208ENST00000479381 GIMAP8Q8ND71 665 aaPredicted RBP10.38□□□□□ -0.75
CMTM1-208ENST00000479381 CCDC148Q8NFR7 591 aa10.38□□□□□ -0.75
CMTM1-208ENST00000479381 PTCD2Q8WV60 388 aaKnown RBP10.38□□□□□ -0.75
CMTM1-208ENST00000479381 PHKBQ93100 1093 aa10.38□□□□□ -0.75
CMTM1-208ENST00000479381 SDF4Q9BRK5 362 aa10.38□□□□□ -0.75
CMTM1-208ENST00000479381 NOC4LQ9BVI4 516 aaKnown RBP10.38□□□□□ -0.75
CMTM1-208ENST00000479381 ANO3Q9BYT9 981 aa10.38□□□□□ -0.75
CMTM1-208ENST00000479381 HDAC6Q9UBN7 1215 aa10.38□□□□□ -0.75
CMTM1-208ENST00000479381 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.37□□□□□ -0.75
CMTM1-208ENST00000479381 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.37□□□□□ -0.75
CMTM1-208ENST00000479381 DDX39AO00148 427 aaKnown RBP10.37□□□□□ -0.75
CMTM1-208ENST00000479381 STXBP3O00186 592 aa10.37□□□□□ -0.75
CMTM1-208ENST00000479381 PPFIA4O75335 1185 aa10.37□□□□□ -0.75
CMTM1-208ENST00000479381 FOSP01100 380 aaPredicted RBP10.37□□□□□ -0.75
CMTM1-208ENST00000479381 LGALS2P05162 132 aa10.37□□□□□ -0.75
CMTM1-208ENST00000479381 MARK3P27448 753 aa10.37□□□□□ -0.75
CMTM1-208ENST00000479381 GNA11P29992 359 aa10.37□□□□□ -0.75
CMTM1-208ENST00000479381 KCNJ6P48051 423 aa10.37□□□□□ -0.75
CMTM1-208ENST00000479381 NLRP5P59047 1200 aa10.37□□□□□ -0.75
CMTM1-208ENST00000479381 MRPS9P82933 396 aaKnown RBP10.37□□□□□ -0.75
CMTM1-208ENST00000479381 SSRP1Q08945 709 aaKnown RBP10.37□□□□□ -0.75
CMTM1-208ENST00000479381 GDF6Q6KF10 455 aaPredicted RBP10.37□□□□□ -0.75
CMTM1-208ENST00000479381 METTL7BQ6UX53 244 aa10.37□□□□□ -0.75
CMTM1-208ENST00000479381 BICD2Q8TD16 824 aa10.37□□□□□ -0.75
CMTM1-208ENST00000479381 GLG1Q92896 1179 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms