RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 BRDTQ58F21 947 aaPredicted RBP7.74□□□□□ -1.17
VCP-205ENST00000479300 SEPT14Q6ZU15 432 aa7.74□□□□□ -1.17
VCP-205ENST00000479300 CHST3Q7LGC8 479 aa7.74□□□□□ -1.17
VCP-205ENST00000479300 CCDC155Q8N6L0 562 aa7.74□□□□□ -1.17
VCP-205ENST00000479300 DBF4BQ8NFT6 615 aa7.74□□□□□ -1.17
VCP-205ENST00000479300 DNERQ8NFT8 737 aa7.74□□□□□ -1.17
VCP-205ENST00000479300 KCNV2Q8TDN2 545 aa7.74□□□□□ -1.17
VCP-205ENST00000479300 SYTL5Q8TDW5 730 aaPredicted RBP7.74□□□□□ -1.17
VCP-205ENST00000479300 KIF12Q96FN5 646 aa7.74□□□□□ -1.17
VCP-205ENST00000479300 SNX27Q96L92 541 aa7.74□□□□□ -1.17
VCP-205ENST00000479300 ALG1Q9BT22 464 aa7.74□□□□□ -1.17
VCP-205ENST00000479300 KRT23Q9C075 422 aa7.74□□□□□ -1.17
VCP-205ENST00000479300 KAT14Q9H8E8 782 aa7.74□□□□□ -1.17
VCP-205ENST00000479300 CNNM2Q9H8M5 875 aa7.74□□□□□ -1.17
VCP-205ENST00000479300 ALG13Q9NP73 1137 aaKnown RBP7.74□□□□□ -1.17
VCP-205ENST00000479300 DDX41Q9UJV9 622 aaKnown RBP7.74□□□□□ -1.17
VCP-205ENST00000479300 NLRC5Q86WI3 1866 aa7.73□□□□□ -1.17
VCP-205ENST00000479300 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.73□□□□□ -1.17
VCP-205ENST00000479300 H3BNC9 293 aa7.73□□□□□ -1.17
VCP-205ENST00000479300 OPLAHO14841 1288 aa7.73□□□□□ -1.17
VCP-205ENST00000479300 RGS20O76081 388 aa7.73□□□□□ -1.17
VCP-205ENST00000479300 GOLGA8HP0CJ92 632 aa7.73□□□□□ -1.17
VCP-205ENST00000479300 PTK7Q13308 1070 aa7.73□□□□□ -1.17
VCP-205ENST00000479300 IKBKEQ14164 716 aa7.73□□□□□ -1.17
VCP-205ENST00000479300 MFSD10Q14728 455 aa7.73□□□□□ -1.17
VCP-205ENST00000479300 KIAA0753Q2KHM9 967 aa7.73□□□□□ -1.17
VCP-205ENST00000479300 USH1GQ495M9 461 aa7.73□□□□□ -1.17
VCP-205ENST00000479300 GPATCH4Q5T3I0 446 aaKnown RBP7.73□□□□□ -1.17
VCP-205ENST00000479300 L1TD1Q5T7N2 865 aaKnown RBP7.73□□□□□ -1.17
VCP-205ENST00000479300 ZNF589Q86UQ0 364 aaPredicted RBP7.73□□□□□ -1.17
VCP-205ENST00000479300 MYOCDQ8IZQ8 938 aa7.73□□□□□ -1.17
VCP-205ENST00000479300 BANK1Q8NDB2 785 aa7.73□□□□□ -1.17
VCP-205ENST00000479300 RGS22Q8NE09 1264 aa7.73□□□□□ -1.17
VCP-205ENST00000479300 PRSS33Q8NF86 280 aa7.73□□□□□ -1.17
VCP-205ENST00000479300 PABPC5Q96DU9 382 aaKnown RBP7.73□□□□□ -1.17
VCP-205ENST00000479300 UBAC1Q9BSL1 405 aa7.73□□□□□ -1.17
VCP-205ENST00000479300 DSCC1Q9BVC3 393 aa7.73□□□□□ -1.17
VCP-205ENST00000479300 UBA5Q9GZZ9 404 aa7.73□□□□□ -1.17
VCP-205ENST00000479300 BCAS3Q9H6U6 928 aa7.73□□□□□ -1.17
VCP-205ENST00000479300 INSL6Q9Y581 213 aa7.73□□□□□ -1.17
VCP-205ENST00000479300 ZFHX2Q9C0A1 2572 aaPredicted RBP7.72□□□□□ -1.17
VCP-205ENST00000479300 ERICH2A1L162 156 aa7.72□□□□□ -1.17
VCP-205ENST00000479300 SORBS3O60504 671 aa7.72□□□□□ -1.17
VCP-205ENST00000479300 KDM4AO75164 1064 aa7.72□□□□□ -1.17
VCP-205ENST00000479300 PARNO95453 639 aaKnown RBP7.72□□□□□ -1.17
VCP-205ENST00000479300 CASTP20810 708 aaKnown RBP7.72□□□□□ -1.17
VCP-205ENST00000479300 HOXC8P31273 242 aa7.72□□□□□ -1.17
VCP-205ENST00000479300 GTF2F1P35269 517 aaKnown RBP eCLIP7.72□□□□□ -1.17
VCP-205ENST00000479300 SP2Q02086 613 aa7.72□□□□□ -1.17
VCP-205ENST00000479300 GPM6BQ13491 265 aa7.72□□□□□ -1.17
VCP-205ENST00000479300 HSP90AA2PQ14568 343 aaPredicted RBP7.72□□□□□ -1.17
VCP-205ENST00000479300 CLUL1Q15846 466 aa7.72□□□□□ -1.17
VCP-205ENST00000479300 DGKDQ16760 1214 aa7.72□□□□□ -1.17
VCP-205ENST00000479300 CTC1Q2NKJ3 1217 aa7.72□□□□□ -1.17
VCP-205ENST00000479300 PLEKHG4Q58EX7 1191 aa7.72□□□□□ -1.17
VCP-205ENST00000479300 IER5LQ5T953 404 aa7.72□□□□□ -1.17
VCP-205ENST00000479300 SERINC5Q86VE9 423 aa7.72□□□□□ -1.17
VCP-205ENST00000479300 DGKHQ86XP1 1220 aa7.72□□□□□ -1.17
VCP-205ENST00000479300 TBC1D10CQ8IV04 446 aa7.72□□□□□ -1.17
VCP-205ENST00000479300 ADHFE1Q8IWW8 467 aa7.72□□□□□ -1.17
VCP-205ENST00000479300 TMEM192Q8IY95 271 aa7.72□□□□□ -1.17
VCP-205ENST00000479300 EFCAB3Q8N7B9 438 aa7.72□□□□□ -1.17
VCP-205ENST00000479300 C7orf31Q8N865 590 aa7.72□□□□□ -1.17
VCP-205ENST00000479300 IL31RAQ8NI17 732 aa7.72□□□□□ -1.17
VCP-205ENST00000479300 GPKOWQ92917 476 aaPredicted RBP eCLIP7.72□□□□□ -1.17
VCP-205ENST00000479300 EMID1Q96A84 441 aaPredicted RBP7.72□□□□□ -1.17
VCP-205ENST00000479300 ZKSCAN3Q9BRR0 538 aa7.72□□□□□ -1.17
VCP-205ENST00000479300 MUTYHQ9UIF7 546 aa7.72□□□□□ -1.17
VCP-205ENST00000479300 LAMA4Q16363 1823 aa7.72□□□□□ -1.17
VCP-205ENST00000479300 RALGAPA2Q2PPJ7 1873 aa7.71□□□□□ -1.18
VCP-205ENST00000479300 GRM6O15303 877 aa7.71□□□□□ -1.18
VCP-205ENST00000479300 LINC01565O15544 149 aa7.71□□□□□ -1.18
VCP-205ENST00000479300 EFCAB14O75071 495 aa7.71□□□□□ -1.18
VCP-205ENST00000479300 TBX10O75333 385 aa7.71□□□□□ -1.18
VCP-205ENST00000479300 EIF2AK2P19525 551 aaKnown RBP7.71□□□□□ -1.18
VCP-205ENST00000479300 THPOP40225 353 aa7.71□□□□□ -1.18
VCP-205ENST00000479300 HYAL1Q12794 435 aa7.71□□□□□ -1.18
VCP-205ENST00000479300 TRAF1Q13077 416 aa7.71□□□□□ -1.18
VCP-205ENST00000479300 CAMK1Q14012 370 aa7.71□□□□□ -1.18
VCP-205ENST00000479300 SART3Q15020 963 aaKnown RBP7.71□□□□□ -1.18
VCP-205ENST00000479300 SMAD2Q15796 467 aaKnown RBP7.71□□□□□ -1.18
VCP-205ENST00000479300 CSPP1Q1MSJ5 1256 aa7.71□□□□□ -1.18
VCP-205ENST00000479300 PUS10Q3MIT2 529 aaKnown RBP7.71□□□□□ -1.18
VCP-205ENST00000479300 HSDL1Q3SXM5 330 aa7.71□□□□□ -1.18
VCP-205ENST00000479300 TIGD5Q53EQ6 642 aa7.71□□□□□ -1.18
VCP-205ENST00000479300 HERC4Q5GLZ8 1057 aaPredicted RBP7.71□□□□□ -1.18
VCP-205ENST00000479300 TTC22Q5TAA0 569 aa7.71□□□□□ -1.18
VCP-205ENST00000479300 RALYLQ86SE5 291 aaKnown RBP7.71□□□□□ -1.18
VCP-205ENST00000479300 RPAINQ86UA6 219 aa7.71□□□□□ -1.18
VCP-205ENST00000479300 FBXO11Q86XK2 927 aa7.71□□□□□ -1.18
VCP-205ENST00000479300 PNMA1Q8ND90 353 aa7.71□□□□□ -1.18
VCP-205ENST00000479300 PPTC7Q8NI37 304 aa7.71□□□□□ -1.18
VCP-205ENST00000479300 NSUN6Q8TEA1 469 aaKnown RBP7.71□□□□□ -1.18
VCP-205ENST00000479300 TOP1MTQ969P6 601 aa7.71□□□□□ -1.18
VCP-205ENST00000479300 ZSCAN10Q96SZ4 725 aaPredicted RBP7.71□□□□□ -1.18
VCP-205ENST00000479300 RMDN3Q96TC7 470 aa7.71□□□□□ -1.18
VCP-205ENST00000479300 C16orf70Q9BSU1 422 aa7.71□□□□□ -1.18
VCP-205ENST00000479300 KCNH6Q9H252 994 aa7.71□□□□□ -1.18
VCP-205ENST00000479300 NSUN3Q9H649 340 aaKnown RBP7.71□□□□□ -1.18
VCP-205ENST00000479300 CLDND1Q9NY35 253 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms