RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 PLEKHG4Q58EX7 1191 aa16.84■□□□□ 0.29
USP11-207ENST00000478596 MCTP2Q6DN12 878 aa16.84■□□□□ 0.29
USP11-207ENST00000478596 USP26Q9BXU7 913 aa16.84■□□□□ 0.29
USP11-207ENST00000478596 CNNM2Q9H8M5 875 aa16.84■□□□□ 0.29
USP11-207ENST00000478596 CCPG1Q9ULG6 757 aa16.84■□□□□ 0.29
USP11-207ENST00000478596 MYO7AQ13402 2215 aa16.84■□□□□ 0.29
USP11-207ENST00000478596 ICAM1P05362 532 aa16.83■□□□□ 0.28
USP11-207ENST00000478596 MMP3P08254 477 aa16.83■□□□□ 0.28
USP11-207ENST00000478596 CYP21A2P08686 494 aa16.83■□□□□ 0.28
USP11-207ENST00000478596 HSPA4P34932 840 aa16.83■□□□□ 0.28
USP11-207ENST00000478596 CTNNB1P35222 781 aa16.83■□□□□ 0.28
USP11-207ENST00000478596 SLC1A4P43007 532 aa16.83■□□□□ 0.28
USP11-207ENST00000478596 NDUFV1P49821 464 aa16.83■□□□□ 0.28
USP11-207ENST00000478596 PDE4DQ08499 809 aa16.83■□□□□ 0.28
USP11-207ENST00000478596 KRT32Q14532 448 aa16.83■□□□□ 0.28
USP11-207ENST00000478596 WDR87Q6ZQQ6 2873 aa16.83■□□□□ 0.28
USP11-207ENST00000478596 MICAL3Q7RTP6 2002 aa16.83■□□□□ 0.28
USP11-207ENST00000478596 C7orf31Q8N865 590 aa16.83■□□□□ 0.28
USP11-207ENST00000478596 AFG1LQ8WV93 481 aa16.83■□□□□ 0.28
USP11-207ENST00000478596 WNT8BQ93098 351 aa16.83■□□□□ 0.28
USP11-207ENST00000478596 RIPOR3Q96MK2 946 aa16.83■□□□□ 0.28
USP11-207ENST00000478596 PHF7Q9BWX1 381 aaPredicted RBP16.83■□□□□ 0.28
USP11-207ENST00000478596 C22orf23Q9BZE7 217 aa16.83■□□□□ 0.28
USP11-207ENST00000478596 IGFLR1Q9H665 355 aa16.83■□□□□ 0.28
USP11-207ENST00000478596 CLEC1BQ9P126 229 aa16.83■□□□□ 0.28
USP11-207ENST00000478596 HDAC6Q9UBN7 1215 aa16.83■□□□□ 0.28
USP11-207ENST00000478596 RWDD3Q9Y3V2 267 aa16.83■□□□□ 0.28
USP11-207ENST00000478596 MYH4Q9Y623 1939 aa16.82■□□□□ 0.28
USP11-207ENST00000478596 NEDD4P46934 1319 aa16.82■□□□□ 0.28
USP11-207ENST00000478596 TSPY2A6NKD2 308 aa16.82■□□□□ 0.28
USP11-207ENST00000478596 RBAK-RBAKDNI3L0D1 243 aa16.82■□□□□ 0.28
USP11-207ENST00000478596 RANBP6O60518 1105 aaKnown RBP16.82■□□□□ 0.28
USP11-207ENST00000478596 LINC00271P0C7V0 271 aa16.82■□□□□ 0.28
USP11-207ENST00000478596 CASTP20810 708 aaKnown RBP16.82■□□□□ 0.28
USP11-207ENST00000478596 BMPR1AP36894 532 aa16.82■□□□□ 0.28
USP11-207ENST00000478596 PTPN21Q16825 1174 aa16.82■□□□□ 0.28
USP11-207ENST00000478596 MPHOSPH6Q99547 160 aaKnown RBP16.82■□□□□ 0.28
USP11-207ENST00000478596 KRT23Q9C075 422 aa16.82■□□□□ 0.28
USP11-207ENST00000478596 ANAPC4Q9UJX5 808 aa16.82■□□□□ 0.28
USP11-207ENST00000478596 PRR12Q9ULL5 1215 aa16.82■□□□□ 0.28
USP11-207ENST00000478596 ISY1Q9ULR0 285 aaKnown RBP16.82■□□□□ 0.28
USP11-207ENST00000478596 DMXL1Q9Y485 3027 aa16.82■□□□□ 0.28
USP11-207ENST00000478596 PLIN4Q96Q06 1357 aa16.81■□□□□ 0.28
USP11-207ENST00000478596 ARIH2O95376 493 aa16.81■□□□□ 0.28
USP11-207ENST00000478596 MMP1P03956 469 aa16.81■□□□□ 0.28
USP11-207ENST00000478596 TSPY3P0CV98 308 aa16.81■□□□□ 0.28
USP11-207ENST00000478596 TSPY8P0CW00 308 aa16.81■□□□□ 0.28
USP11-207ENST00000478596 PCP11498 1178 aaKnown RBP16.81■□□□□ 0.28
USP11-207ENST00000478596 SNAP25P60880 206 aa16.81■□□□□ 0.28
USP11-207ENST00000478596 NECTIN1Q15223 517 aa16.81■□□□□ 0.28
USP11-207ENST00000478596 CCDC62Q6P9F0 684 aa16.81■□□□□ 0.28
USP11-207ENST00000478596 FRMD5Q7Z6J6 570 aa16.81■□□□□ 0.28
USP11-207ENST00000478596 ZNF444Q8N0Y2 327 aaPredicted RBP16.81■□□□□ 0.28
USP11-207ENST00000478596 FIBCD1Q8N539 461 aa16.81■□□□□ 0.28
USP11-207ENST00000478596 NCOA7Q8NI08 942 aa16.81■□□□□ 0.28
USP11-207ENST00000478596 ESR2Q92731 530 aa16.81■□□□□ 0.28
USP11-207ENST00000478596 IL17RAQ96F46 866 aa16.81■□□□□ 0.28
USP11-207ENST00000478596 JAKMIP1Q96N16 626 aaKnown RBP16.81■□□□□ 0.28
USP11-207ENST00000478596 INCENPQ9NQS7 918 aa16.81■□□□□ 0.28
USP11-207ENST00000478596 USP15Q9Y4E8 981 aaPredicted RBP16.81■□□□□ 0.28
USP11-207ENST00000478596 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.8■□□□□ 0.28
USP11-207ENST00000478596 RSPH10B2B2RC85 870 aa16.8■□□□□ 0.28
USP11-207ENST00000478596 E7EWF7 191 aa16.8■□□□□ 0.28
USP11-207ENST00000478596 NFIBO00712 420 aa16.8■□□□□ 0.28
USP11-207ENST00000478596 UPP2O95045 317 aa16.8■□□□□ 0.28
USP11-207ENST00000478596 PDGFBP01127 241 aaPredicted RBP16.8■□□□□ 0.28
USP11-207ENST00000478596 RSPH10BP0C881 870 aa16.8■□□□□ 0.28
USP11-207ENST00000478596 FGD1P98174 961 aa16.8■□□□□ 0.28
USP11-207ENST00000478596 DGLUCYQ7Z3D6 616 aa16.8■□□□□ 0.28
USP11-207ENST00000478596 EFHBQ8N7U6 833 aa16.8■□□□□ 0.28
USP11-207ENST00000478596 DNERQ8NFT8 737 aa16.8■□□□□ 0.28
USP11-207ENST00000478596 SEPT8Q92599 483 aa16.8■□□□□ 0.28
USP11-207ENST00000478596 PPP2R3CQ969Q6 453 aa16.8■□□□□ 0.28
USP11-207ENST00000478596 KATNAL1Q9BW62 490 aa16.8■□□□□ 0.28
USP11-207ENST00000478596 IFIH1Q9BYX4 1025 aaKnown RBP16.8■□□□□ 0.28
USP11-207ENST00000478596 SNX14Q9Y5W7 946 aa16.8■□□□□ 0.28
USP11-207ENST00000478596 RALGAPA2Q2PPJ7 1873 aa16.8■□□□□ 0.28
USP11-207ENST00000478596 PTPDC1A2A3K4 754 aa16.79■□□□□ 0.28
USP11-207ENST00000478596 B4E1Z4 1266 aa16.79■□□□□ 0.28
USP11-207ENST00000478596 HAS3O00219 553 aa16.79■□□□□ 0.28
USP11-207ENST00000478596 ATF7P17544 494 aaPredicted RBP16.79■□□□□ 0.28
USP11-207ENST00000478596 PSMA5P28066 241 aa16.79■□□□□ 0.28
USP11-207ENST00000478596 ARHGAP1Q07960 439 aa16.79■□□□□ 0.28
USP11-207ENST00000478596 CAMK1Q14012 370 aa16.79■□□□□ 0.28
USP11-207ENST00000478596 DGKDQ16760 1214 aa16.79■□□□□ 0.28
USP11-207ENST00000478596 RCSD1Q6JBY9 416 aa16.79■□□□□ 0.28
USP11-207ENST00000478596 SLC30A10Q6XR72 485 aa16.79■□□□□ 0.28
USP11-207ENST00000478596 NEDD1Q8NHV4 660 aa16.79■□□□□ 0.28
USP11-207ENST00000478596 CLP1Q92989 425 aaKnown RBP16.79■□□□□ 0.28
USP11-207ENST00000478596 RMDN1Q96DB5 314 aa16.79■□□□□ 0.28
USP11-207ENST00000478596 RPGRIP1Q96KN7 1286 aa16.79■□□□□ 0.28
USP11-207ENST00000478596 UBAC1Q9BSL1 405 aa16.79■□□□□ 0.28
USP11-207ENST00000478596 ATG2AQ2TAZ0 1938 aa16.78■□□□□ 0.28
USP11-207ENST00000478596 CACNA1GO43497 2377 aa16.78■□□□□ 0.28
USP11-207ENST00000478596 ORC4O43929 436 aa16.78■□□□□ 0.28
USP11-207ENST00000478596 F2P00734 622 aa16.78■□□□□ 0.28
USP11-207ENST00000478596 GH1P01241 217 aa16.78■□□□□ 0.28
USP11-207ENST00000478596 PSEN2P49810 448 aa16.78■□□□□ 0.28
USP11-207ENST00000478596 SART3Q15020 963 aaKnown RBP16.78■□□□□ 0.28
USP11-207ENST00000478596 BLOC1S2Q6QNY1 142 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms