RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 LAMC2Q13753 1193 aa30.46■■■□□ 2.47
CCM2-211ENST00000478582 CELF3Q5SZQ8 465 aaKnown RBP30.46■■■□□ 2.47
CCM2-211ENST00000478582 MYSM1Q5VVJ2 828 aa30.46■■■□□ 2.47
CCM2-211ENST00000478582 GIMAP8Q8ND71 665 aaPredicted RBP30.46■■■□□ 2.47
CCM2-211ENST00000478582 KCNH7Q9NS40 1196 aa30.46■■■□□ 2.47
CCM2-211ENST00000478582 CYP3A7-CYP3A51PA0A087WV96 503 aa30.45■■■□□ 2.47
CCM2-211ENST00000478582 CYP3A7P24462 503 aa30.45■■■□□ 2.47
CCM2-211ENST00000478582 CPT1AP50416 773 aa30.45■■■□□ 2.47
CCM2-211ENST00000478582 MDM2Q00987 491 aaPredicted RBP30.45■■■□□ 2.47
CCM2-211ENST00000478582 INF2Q27J81 1249 aa30.45■■■□□ 2.47
CCM2-211ENST00000478582 MOXD1Q6UVY6 613 aa30.45■■■□□ 2.47
CCM2-211ENST00000478582 PIK3AP1Q6ZUJ8 805 aa30.45■■■□□ 2.47
CCM2-211ENST00000478582 DHX37Q8IY37 1157 aaKnown RBP30.45■■■□□ 2.47
CCM2-211ENST00000478582 LBHD1Q9BQE6 289 aaPredicted RBP30.45■■■□□ 2.47
CCM2-211ENST00000478582 FOXP1Q9H334 677 aaPredicted RBP30.45■■■□□ 2.47
CCM2-211ENST00000478582 MYH7BA7E2Y1 1941 aa30.45■■■□□ 2.46
CCM2-211ENST00000478582 GGPS1O95749 300 aa30.44■■■□□ 2.46
CCM2-211ENST00000478582 KCNA2P16389 499 aa30.44■■■□□ 2.46
CCM2-211ENST00000478582 EARS2Q5JPH6 523 aaKnown RBP30.44■■■□□ 2.46
CCM2-211ENST00000478582 UBE2OQ9C0C9 1292 aaKnown RBP30.44■■■□□ 2.46
CCM2-211ENST00000478582 PDLIM7Q9NR12 457 aa30.44■■■□□ 2.46
CCM2-211ENST00000478582 ZEB2O60315 1214 aa30.43■■■□□ 2.46
CCM2-211ENST00000478582 ATP9AO75110 1047 aa30.43■■■□□ 2.46
CCM2-211ENST00000478582 ARP10275 920 aa30.43■■■□□ 2.46
CCM2-211ENST00000478582 SETQ01105 290 aaPredicted RBP30.43■■■□□ 2.46
CCM2-211ENST00000478582 BRDTQ58F21 947 aaPredicted RBP30.43■■■□□ 2.46
CCM2-211ENST00000478582 ANKRD33Q7Z3H0 272 aa30.43■■■□□ 2.46
CCM2-211ENST00000478582 PLA2G4DQ86XP0 818 aa30.43■■■□□ 2.46
CCM2-211ENST00000478582 VTI1AQ96AJ9 217 aa30.43■■■□□ 2.46
CCM2-211ENST00000478582 MBOAT7Q96N66 472 aa30.43■■■□□ 2.46
CCM2-211ENST00000478582 TOX2Q96NM4 488 aa30.43■■■□□ 2.46
CCM2-211ENST00000478582 PRDM5Q9NQX1 630 aaPredicted RBP30.43■■■□□ 2.46
CCM2-211ENST00000478582 METTL7BQ6UX53 244 aa30.42■■■□□ 2.46
CCM2-211ENST00000478582 NEK8Q86SG6 692 aa30.42■■■□□ 2.46
CCM2-211ENST00000478582 PPTC7Q8NI37 304 aa30.42■■■□□ 2.46
CCM2-211ENST00000478582 LENG9Q96B70 501 aa30.42■■■□□ 2.46
CCM2-211ENST00000478582 MLXIPQ9HAP2 919 aa30.42■■■□□ 2.46
CCM2-211ENST00000478582 AGO4Q9HCK5 861 aaKnown RBP30.42■■■□□ 2.46
CCM2-211ENST00000478582 RANBP2P49792 3224 aaKnown RBP30.41■■■□□ 2.46
CCM2-211ENST00000478582 PQBP1O60828 265 aaKnown RBP30.41■■■□□ 2.46
CCM2-211ENST00000478582 CABYRO75952 493 aa30.41■■■□□ 2.46
CCM2-211ENST00000478582 CLTBP09497 229 aa30.41■■■□□ 2.46
CCM2-211ENST00000478582 CDK7P50613 346 aa30.41■■■□□ 2.46
CCM2-211ENST00000478582 Q4G0T1 1027 aa30.41■■■□□ 2.46
CCM2-211ENST00000478582 LARP1BQ659C4 914 aaKnown RBP30.41■■■□□ 2.46
CCM2-211ENST00000478582 SH3RF1Q7Z6J0 888 aa30.41■■■□□ 2.46
CCM2-211ENST00000478582 AFG1LQ8WV93 481 aa30.41■■■□□ 2.46
CCM2-211ENST00000478582 NAP1L4Q99733 375 aaKnown RBP30.41■■■□□ 2.46
CCM2-211ENST00000478582 BCAS3Q9H6U6 928 aa30.41■■■□□ 2.46
CCM2-211ENST00000478582 A0A0U1RQG5 324 aaPredicted RBP30.4■■■□□ 2.46
CCM2-211ENST00000478582 TRIM43BA6NCK2 446 aa30.4■■■□□ 2.46
CCM2-211ENST00000478582 DCDC2CA8MYV0 355 aa30.4■■■□□ 2.46
CCM2-211ENST00000478582 KPNA6O60684 536 aa30.4■■■□□ 2.46
CCM2-211ENST00000478582 U2AF2P26368 475 aaKnown RBP eCLIP30.4■■■□□ 2.46
CCM2-211ENST00000478582 PRR16Q569H4 304 aa30.4■■■□□ 2.46
CCM2-211ENST00000478582 PPP4R3AQ6IN85 833 aa30.4■■■□□ 2.46
CCM2-211ENST00000478582 CYFIP1Q7L576 1253 aa30.4■■■□□ 2.46
CCM2-211ENST00000478582 TRIM43Q96BQ3 446 aaPredicted RBP30.4■■■□□ 2.46
CCM2-211ENST00000478582 POLR3EQ9NVU0 708 aa30.4■■■□□ 2.46
CCM2-211ENST00000478582 NFASCO94856 1347 aa30.4■■■□□ 2.46
CCM2-211ENST00000478582 FAM205CA6NFA0 338 aa30.39■■■□□ 2.46
CCM2-211ENST00000478582 ARVCFO00192 962 aa30.39■■■□□ 2.46
CCM2-211ENST00000478582 MMP3P08254 477 aa30.39■■■□□ 2.46
CCM2-211ENST00000478582 HOXD8P13378 290 aaPredicted RBP30.39■■■□□ 2.46
CCM2-211ENST00000478582 GCFC2P16383 781 aaKnown RBP30.39■■■□□ 2.46
CCM2-211ENST00000478582 PDCP20941 246 aa30.39■■■□□ 2.46
CCM2-211ENST00000478582 CXCL17Q6UXB2 119 aa30.39■■■□□ 2.46
CCM2-211ENST00000478582 TDHQ8IZJ6 230 aa30.39■■■□□ 2.46
CCM2-211ENST00000478582 SPATA33Q96N06 139 aa30.39■■■□□ 2.46
CCM2-211ENST00000478582 MROH7Q68CQ1 1323 aa30.39■■■□□ 2.46
CCM2-211ENST00000478582 FAAP100Q0VG06 881 aa30.38■■■□□ 2.45
CCM2-211ENST00000478582 LETM2Q2VYF4 491 aa30.38■■■□□ 2.45
CCM2-211ENST00000478582 HSDL1Q3SXM5 330 aa30.38■■■□□ 2.45
CCM2-211ENST00000478582 LTBP2Q14767 1821 aa30.38■■■□□ 2.45
CCM2-211ENST00000478582 H3BQV1 296 aa30.37■■■□□ 2.45
CCM2-211ENST00000478582 KIAA0355O15063 1070 aa30.37■■■□□ 2.45
CCM2-211ENST00000478582 PPFIA4O75335 1185 aa30.37■■■□□ 2.45
CCM2-211ENST00000478582 TDP2O95551 362 aa30.37■■■□□ 2.45
CCM2-211ENST00000478582 PURAQ00577 322 aaKnown RBP30.37■■■□□ 2.45
CCM2-211ENST00000478582 ITGB3BPQ13352 177 aaPredicted RBP30.37■■■□□ 2.45
CCM2-211ENST00000478582 DGKDQ16760 1214 aa30.37■■■□□ 2.45
CCM2-211ENST00000478582 NOSTRINQ8IVI9 506 aa30.37■■■□□ 2.45
CCM2-211ENST00000478582 TMEM39AQ9NV64 488 aa30.37■■■□□ 2.45
CCM2-211ENST00000478582 KIF28PB7ZC32 967 aa30.36■■■□□ 2.45
CCM2-211ENST00000478582 IPO5O00410 1097 aaKnown RBP30.36■■■□□ 2.45
CCM2-211ENST00000478582 GNL2Q13823 731 aaKnown RBP30.36■■■□□ 2.45
CCM2-211ENST00000478582 BADQ92934 168 aa30.36■■■□□ 2.45
CCM2-211ENST00000478582 SDF4Q9BRK5 362 aa30.36■■■□□ 2.45
CCM2-211ENST00000478582 ZNF577Q9BSK1 485 aa30.36■■■□□ 2.45
CCM2-211ENST00000478582 TBC1D22BQ9NU19 505 aa30.36■■■□□ 2.45
CCM2-211ENST00000478582 PKD2L1Q9P0L9 805 aa30.36■■■□□ 2.45
CCM2-211ENST00000478582 DHX15O43143 795 aaKnown RBP30.35■■■□□ 2.45
CCM2-211ENST00000478582 SORBS3O60504 671 aa30.35■■■□□ 2.45
CCM2-211ENST00000478582 SLC43A3Q8NBI5 491 aa30.35■■■□□ 2.45
CCM2-211ENST00000478582 GPR20Q99678 358 aa30.35■■■□□ 2.45
CCM2-211ENST00000478582 FOXD4L1Q9NU39 408 aa30.35■■■□□ 2.45
CCM2-211ENST00000478582 DDX25Q9UHL0 483 aaKnown RBP30.35■■■□□ 2.45
CCM2-211ENST00000478582 MSH4O15457 936 aa30.34■■■□□ 2.45
CCM2-211ENST00000478582 CCNT1O60563 726 aaKnown RBP30.34■■■□□ 2.45
CCM2-211ENST00000478582 MYL3P08590 195 aa30.34■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms