RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 ZCCHC11Q5TAX3 1644 aaKnown RBP5.55□□□□□ -1.52
GPNMB-210ENST00000478451 MADDQ8WXG6 1647 aa5.55□□□□□ -1.52
GPNMB-210ENST00000478451 PARD3Q8TEW0 1356 aa5.55□□□□□ -1.52
GPNMB-210ENST00000478451 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.54□□□□□ -1.52
GPNMB-210ENST00000478451 TCERG1O14776 1098 aaKnown RBP5.54□□□□□ -1.52
GPNMB-210ENST00000478451 KLF4O43474 513 aa5.54□□□□□ -1.52
GPNMB-210ENST00000478451 PPP1R11O60927 126 aaPredicted RBP5.54□□□□□ -1.52
GPNMB-210ENST00000478451 STK10O94804 968 aaKnown RBP5.54□□□□□ -1.52
GPNMB-210ENST00000478451 PRR5P85299 388 aa5.54□□□□□ -1.52
GPNMB-210ENST00000478451 DDR2Q16832 855 aa5.54□□□□□ -1.52
GPNMB-210ENST00000478451 SLC10A6Q3KNW5 377 aa5.54□□□□□ -1.52
GPNMB-210ENST00000478451 TMEFF1Q8IYR6 380 aa5.54□□□□□ -1.52
GPNMB-210ENST00000478451 NETO2Q8NC67 525 aa5.54□□□□□ -1.52
GPNMB-210ENST00000478451 PMFBP1Q8TBY8 1022 aa5.54□□□□□ -1.52
GPNMB-210ENST00000478451 PANK1Q8TE04 598 aa5.54□□□□□ -1.52
GPNMB-210ENST00000478451 UBXN4Q92575 508 aa5.54□□□□□ -1.52
GPNMB-210ENST00000478451 RXFP1Q9HBX9 757 aa5.54□□□□□ -1.52
GPNMB-210ENST00000478451 ST7Q9NRC1 585 aa5.54□□□□□ -1.52
GPNMB-210ENST00000478451 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.54□□□□□ -1.52
GPNMB-210ENST00000478451 NUDT5Q9UKK9 219 aa5.54□□□□□ -1.52
GPNMB-210ENST00000478451 BLMP54132 1417 aaPredicted RBP5.54□□□□□ -1.52
GPNMB-210ENST00000478451 IFT172Q9UG01 1749 aa5.54□□□□□ -1.52
GPNMB-210ENST00000478451 TRPM2O94759 1503 aa5.53□□□□□ -1.52
GPNMB-210ENST00000478451 ABCC1P33527 1531 aa5.53□□□□□ -1.52
GPNMB-210ENST00000478451 MYOM1P52179 1685 aa5.53□□□□□ -1.52
GPNMB-210ENST00000478451 IRS2Q9Y4H2 1338 aa5.53□□□□□ -1.52
GPNMB-210ENST00000478451 AGRPO00253 132 aa5.53□□□□□ -1.52
GPNMB-210ENST00000478451 BUB1BO60566 1050 aaPredicted RBP5.53□□□□□ -1.52
GPNMB-210ENST00000478451 SCG5P05408 212 aa5.53□□□□□ -1.52
GPNMB-210ENST00000478451 PFKLP17858 780 aa5.53□□□□□ -1.52
GPNMB-210ENST00000478451 FBLN1P23142 703 aa5.53□□□□□ -1.52
GPNMB-210ENST00000478451 HOXC12P31275 282 aa5.53□□□□□ -1.52
GPNMB-210ENST00000478451 ECI1P42126 302 aa5.53□□□□□ -1.52
GPNMB-210ENST00000478451 INF2Q27J81 1249 aa5.53□□□□□ -1.52
GPNMB-210ENST00000478451 TCERG1LQ5VWI1 586 aa5.53□□□□□ -1.52
GPNMB-210ENST00000478451 E4F1Q66K89 784 aaPredicted RBP5.53□□□□□ -1.52
GPNMB-210ENST00000478451 WWC2Q6AWC2 1192 aa5.53□□□□□ -1.52
GPNMB-210ENST00000478451 TMEM151BQ8IW70 566 aa5.53□□□□□ -1.52
GPNMB-210ENST00000478451 USP33Q8TEY7 942 aa5.53□□□□□ -1.52
GPNMB-210ENST00000478451 IPO9Q96P70 1041 aaKnown RBP5.53□□□□□ -1.52
GPNMB-210ENST00000478451 EPB41L4AQ9HCS5 686 aaPredicted RBP5.53□□□□□ -1.52
GPNMB-210ENST00000478451 MARCH2Q9P0N8 246 aa5.53□□□□□ -1.52
GPNMB-210ENST00000478451 PLA2G2DQ9UNK4 145 aa5.53□□□□□ -1.52
GPNMB-210ENST00000478451 A2MP01023 1474 aa5.52□□□□□ -1.53
GPNMB-210ENST00000478451 ST20-MTHFSA0A0A6YYL1 179 aa5.52□□□□□ -1.53
GPNMB-210ENST00000478451 MEFVO15553 781 aaPredicted RBP5.52□□□□□ -1.53
GPNMB-210ENST00000478451 CPP00450 1065 aa5.52□□□□□ -1.53
GPNMB-210ENST00000478451 FUCA1P04066 466 aa5.52□□□□□ -1.53
GPNMB-210ENST00000478451 SYN1P17600 705 aa5.52□□□□□ -1.53
GPNMB-210ENST00000478451 IGFBP6P24592 240 aaPredicted RBP5.52□□□□□ -1.53
GPNMB-210ENST00000478451 KCNJ6P48051 423 aa5.52□□□□□ -1.53
GPNMB-210ENST00000478451 AFF3P51826 1226 aaKnown RBP5.52□□□□□ -1.53
GPNMB-210ENST00000478451 GFRA1P56159 465 aa5.52□□□□□ -1.53
GPNMB-210ENST00000478451 RRP1P56182 461 aaKnown RBP5.52□□□□□ -1.53
GPNMB-210ENST00000478451 KCNAB2Q13303 367 aa5.52□□□□□ -1.53
GPNMB-210ENST00000478451 TARBP2Q15633 366 aaKnown RBP5.52□□□□□ -1.53
GPNMB-210ENST00000478451 SF1Q15637 639 aaKnown RBP5.52□□□□□ -1.53
GPNMB-210ENST00000478451 PRSS53Q2L4Q9 553 aa5.52□□□□□ -1.53
GPNMB-210ENST00000478451 IQCEQ6IPM2 695 aa5.52□□□□□ -1.53
GPNMB-210ENST00000478451 CNKSR3Q6P9H4 555 aa5.52□□□□□ -1.53
GPNMB-210ENST00000478451 GGNQ86UU5 652 aa5.52□□□□□ -1.53
GPNMB-210ENST00000478451 FAM129CQ86XR2 697 aa5.52□□□□□ -1.53
GPNMB-210ENST00000478451 ALG3Q92685 438 aa5.52□□□□□ -1.53
GPNMB-210ENST00000478451 DPF3Q92784 378 aa5.52□□□□□ -1.53
GPNMB-210ENST00000478451 DIO2Q92813 273 aa5.52□□□□□ -1.53
GPNMB-210ENST00000478451 DACT3Q96B18 629 aaPredicted RBP5.52□□□□□ -1.53
GPNMB-210ENST00000478451 TSPAN17Q96FV3 270 aa5.52□□□□□ -1.53
GPNMB-210ENST00000478451 PEX11GQ96HA9 241 aa5.52□□□□□ -1.53
GPNMB-210ENST00000478451 BTG4Q9NY30 223 aa5.52□□□□□ -1.53
GPNMB-210ENST00000478451 TMEFF2Q9UIK5 374 aaPredicted RBP5.52□□□□□ -1.53
GPNMB-210ENST00000478451 EIF3AQ14152 1382 aaKnown RBP5.52□□□□□ -1.53
GPNMB-210ENST00000478451 MYO3AQ8NEV4 1616 aa5.52□□□□□ -1.53
GPNMB-210ENST00000478451 CFAP74Q9C0B2 1584 aa5.51□□□□□ -1.53
GPNMB-210ENST00000478451 SCAPERQ9BY12 1400 aa5.51□□□□□ -1.53
GPNMB-210ENST00000478451 NTRK1P04629 796 aa5.51□□□□□ -1.53
GPNMB-210ENST00000478451 KRTAP10-2P60368 255 aa5.51□□□□□ -1.53
GPNMB-210ENST00000478451 TMF1P82094 1093 aa5.51□□□□□ -1.53
GPNMB-210ENST00000478451 RBL2Q08999 1139 aa5.51□□□□□ -1.53
GPNMB-210ENST00000478451 RAB33AQ14088 237 aa5.51□□□□□ -1.53
GPNMB-210ENST00000478451 ACBD5Q5T8D3 534 aaPredicted RBP5.51□□□□□ -1.53
GPNMB-210ENST00000478451 CCDC103Q8IW40 242 aa5.51□□□□□ -1.53
GPNMB-210ENST00000478451 TEX2Q8IWB9 1127 aa5.51□□□□□ -1.53
GPNMB-210ENST00000478451 PPIL6Q8IXY8 311 aa5.51□□□□□ -1.53
GPNMB-210ENST00000478451 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.51□□□□□ -1.53
GPNMB-210ENST00000478451 KREMEN2Q8NCW0 462 aa5.51□□□□□ -1.53
GPNMB-210ENST00000478451 PLEKHO2Q8TD55 490 aa5.51□□□□□ -1.53
GPNMB-210ENST00000478451 ARMC5Q96C12 935 aa5.51□□□□□ -1.53
GPNMB-210ENST00000478451 CCDC140Q96MF4 163 aa5.51□□□□□ -1.53
GPNMB-210ENST00000478451 LNPKQ9C0E8 428 aa5.51□□□□□ -1.53
GPNMB-210ENST00000478451 RNF38Q9H0F5 515 aa5.51□□□□□ -1.53
GPNMB-210ENST00000478451 PARD6AQ9NPB6 346 aa5.51□□□□□ -1.53
GPNMB-210ENST00000478451 RCAN3Q9UKA8 241 aa5.51□□□□□ -1.53
GPNMB-210ENST00000478451 WDR7Q9Y4E6 1490 aa5.51□□□□□ -1.53
GPNMB-210ENST00000478451 INO80Q9ULG1 1556 aaPredicted RBP5.5□□□□□ -1.53
GPNMB-210ENST00000478451 ASXL1Q8IXJ9 1541 aa5.5□□□□□ -1.53
GPNMB-210ENST00000478451 A0A1W2PQU0 124 aa5.5□□□□□ -1.53
GPNMB-210ENST00000478451 LIMS1P48059 325 aa5.5□□□□□ -1.53
GPNMB-210ENST00000478451 RPL11P62913 178 aaKnown RBP5.5□□□□□ -1.53
GPNMB-210ENST00000478451 PPP2R2AP63151 447 aa5.5□□□□□ -1.53
GPNMB-210ENST00000478451 SLC9A5Q14940 896 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms