RNA–Protein interactions for RNA: ENST00000478424.5

ARF1-209, Transcript of ADP ribosylation factor 1, humanhuman

TSL 2

Gene ARF1, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-209ENST00000478424 MTA3Q9BTC8 594 aa28.64■■■□□ 2.18
ARF1-209ENST00000478424 TUT1Q9H6E5 874 aaKnown RBP28.64■■■□□ 2.18
ARF1-209ENST00000478424 GTPBP6O43824 516 aaPredicted RBP28.63■■■□□ 2.17
ARF1-209ENST00000478424 SMIM10L2AP0DMW4 78 aa28.63■■■□□ 2.17
ARF1-209ENST00000478424 SMIM10L2BP0DMW5 78 aa28.63■■■□□ 2.17
ARF1-209ENST00000478424 CALM1P0DP23 149 aa28.63■■■□□ 2.17
ARF1-209ENST00000478424 CALM2P0DP24 149 aa28.63■■■□□ 2.17
ARF1-209ENST00000478424 CALM3P0DP25 149 aa28.63■■■□□ 2.17
ARF1-209ENST00000478424 SEMA3FQ13275 785 aa28.63■■■□□ 2.17
ARF1-209ENST00000478424 TRIM71Q2Q1W2 868 aaKnown RBP28.63■■■□□ 2.17
ARF1-209ENST00000478424 FAM117BQ6P1L5 589 aa28.63■■■□□ 2.17
ARF1-209ENST00000478424 TRIM50Q86XT4 487 aa28.63■■■□□ 2.17
ARF1-209ENST00000478424 IL27Q8NEV9 243 aa28.63■■■□□ 2.17
ARF1-209ENST00000478424 VCANP13611 3396 aa28.63■■■□□ 2.17
ARF1-209ENST00000478424 DOCK5Q9H7D0 1870 aa28.63■■■□□ 2.17
ARF1-209ENST00000478424 EPOPA6NHQ4 379 aa28.62■■■□□ 2.17
ARF1-209ENST00000478424 SPATA31C2B4DYI2 1134 aa28.62■■■□□ 2.17
ARF1-209ENST00000478424 TAP1Q03518 808 aa28.62■■■□□ 2.17
ARF1-209ENST00000478424 TCTN1Q2MV58 587 aa28.62■■■□□ 2.17
ARF1-209ENST00000478424 METTL7BQ6UX53 244 aa28.62■■■□□ 2.17
ARF1-209ENST00000478424 PRRC2BQ5JSZ5 2229 aaKnown RBP28.61■■■□□ 2.17
ARF1-209ENST00000478424 CXCL10P02778 98 aa28.61■■■□□ 2.17
ARF1-209ENST00000478424 ICAM3P32942 547 aa28.61■■■□□ 2.17
ARF1-209ENST00000478424 UBE2SQ16763 222 aa28.61■■■□□ 2.17
ARF1-209ENST00000478424 PCNX4Q63HM2 1172 aa28.61■■■□□ 2.17
ARF1-209ENST00000478424 HEATR3Q7Z4Q2 680 aa28.61■■■□□ 2.17
ARF1-209ENST00000478424 NLRX1Q86UT6 975 aa28.61■■■□□ 2.17
ARF1-209ENST00000478424 TSPYL2Q9H2G4 693 aaPredicted RBP28.61■■■□□ 2.17
ARF1-209ENST00000478424 PSTPIP2Q9H939 334 aa28.61■■■□□ 2.17
ARF1-209ENST00000478424 PKD2L1Q9P0L9 805 aa28.61■■■□□ 2.17
ARF1-209ENST00000478424 LCHNA4D1U4 455 aa28.6■■■□□ 2.17
ARF1-209ENST00000478424 MEIS2O14770 477 aa28.6■■■□□ 2.17
ARF1-209ENST00000478424 CTSHP09668 335 aa28.6■■■□□ 2.17
ARF1-209ENST00000478424 SMARCA1P28370 1054 aa28.6■■■□□ 2.17
ARF1-209ENST00000478424 LIFRP42702 1097 aa28.6■■■□□ 2.17
ARF1-209ENST00000478424 IKBKEQ14164 716 aa28.6■■■□□ 2.17
ARF1-209ENST00000478424 RNF20Q5VTR2 975 aa28.6■■■□□ 2.17
ARF1-209ENST00000478424 SYNE3Q6ZMZ3 975 aa28.6■■■□□ 2.17
ARF1-209ENST00000478424 SPRED2Q7Z698 418 aa28.6■■■□□ 2.17
ARF1-209ENST00000478424 SERINC5Q86VE9 423 aa28.6■■■□□ 2.17
ARF1-209ENST00000478424 ATXN2LQ8WWM7 1075 aaKnown RBP28.6■■■□□ 2.17
ARF1-209ENST00000478424 GPR20Q99678 358 aa28.6■■■□□ 2.17
ARF1-209ENST00000478424 ZNF215Q9UL58 517 aaPredicted RBP28.6■■■□□ 2.17
ARF1-209ENST00000478424 PTPRSQ13332 1948 aa28.59■■■□□ 2.17
ARF1-209ENST00000478424 RSPH10B2B2RC85 870 aa28.59■■■□□ 2.17
ARF1-209ENST00000478424 PIK3CDO00329 1044 aa28.59■■■□□ 2.17
ARF1-209ENST00000478424 RSPH10BP0C881 870 aa28.59■■■□□ 2.17
ARF1-209ENST00000478424 MBTPS1Q14703 1052 aa28.59■■■□□ 2.17
ARF1-209ENST00000478424 NECTIN1Q15223 517 aa28.59■■■□□ 2.17
ARF1-209ENST00000478424 TMTC3Q6ZXV5 915 aa28.59■■■□□ 2.17
ARF1-209ENST00000478424 TCEANC2Q96MN5 208 aa28.59■■■□□ 2.17
ARF1-209ENST00000478424 USP26Q9BXU7 913 aa28.59■■■□□ 2.17
ARF1-209ENST00000478424 MTUS1Q9ULD2 1270 aa28.59■■■□□ 2.17
ARF1-209ENST00000478424 TELO2Q9Y4R8 837 aa28.59■■■□□ 2.17
ARF1-209ENST00000478424 ABHD14A-ACY1A0A1B0GW23 586 aa28.58■■■□□ 2.17
ARF1-209ENST00000478424 TREHO43280 583 aa28.58■■■□□ 2.17
ARF1-209ENST00000478424 LGR5O75473 907 aa28.58■■■□□ 2.17
ARF1-209ENST00000478424 MRPS5P82675 430 aaKnown RBP28.58■■■□□ 2.17
ARF1-209ENST00000478424 BMP2KLQ5H9B9 411 aa28.58■■■□□ 2.17
ARF1-209ENST00000478424 KRT40Q6A162 431 aa28.58■■■□□ 2.17
ARF1-209ENST00000478424 XRRA1Q6P2D8 792 aa28.58■■■□□ 2.17
ARF1-209ENST00000478424 TRAF7Q6Q0C0 670 aa28.58■■■□□ 2.17
ARF1-209ENST00000478424 ASB2Q96Q27 587 aa28.58■■■□□ 2.17
ARF1-209ENST00000478424 SETD4Q9NVD3 440 aa28.58■■■□□ 2.17
ARF1-209ENST00000478424 EMSYQ7Z589 1322 aa28.58■■■□□ 2.17
ARF1-209ENST00000478424 SPDYE3A6NKU9 549 aa28.57■■■□□ 2.16
ARF1-209ENST00000478424 CENPQQ7L2Z9 268 aaPredicted RBP28.57■■■□□ 2.16
ARF1-209ENST00000478424 FANCBQ8NB91 859 aa28.57■■■□□ 2.16
ARF1-209ENST00000478424 RNPEPQ9H4A4 650 aa28.57■■■□□ 2.16
ARF1-209ENST00000478424 EFCAB14O75071 495 aa28.56■■■□□ 2.16
ARF1-209ENST00000478424 ARHGAP4P98171 946 aa28.56■■■□□ 2.16
ARF1-209ENST00000478424 NAP1L2Q9ULW6 460 aaPredicted RBP28.56■■■□□ 2.16
ARF1-209ENST00000478424 MTCH2Q9Y6C9 303 aa28.56■■■□□ 2.16
ARF1-209ENST00000478424 MYOCDQ8IZQ8 938 aa28.55■■■□□ 2.16
ARF1-209ENST00000478424 DBF4BQ8NFT6 615 aa28.55■■■□□ 2.16
ARF1-209ENST00000478424 GDPD5Q8WTR4 605 aa28.55■■■□□ 2.16
ARF1-209ENST00000478424 GJB5O95377 273 aa28.54■■■□□ 2.16
ARF1-209ENST00000478424 GNAT1P11488 350 aa28.54■■■□□ 2.16
ARF1-209ENST00000478424 ADAMTS19Q8TE59 1207 aa28.54■■■□□ 2.16
ARF1-209ENST00000478424 NEK1Q96PY6 1258 aa28.54■■■□□ 2.16
ARF1-209ENST00000478424 MARK3P27448 753 aa28.53■■■□□ 2.16
ARF1-209ENST00000478424 TCF7P36402 384 aaPredicted RBP28.53■■■□□ 2.16
ARF1-209ENST00000478424 GRB10Q13322 594 aa28.53■■■□□ 2.16
ARF1-209ENST00000478424 APOA5Q6Q788 366 aa28.53■■■□□ 2.16
ARF1-209ENST00000478424 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.53■■■□□ 2.161e-6■■■■■ 29.1
ARF1-209ENST00000478424 GIMAP8Q8ND71 665 aaPredicted RBP28.53■■■□□ 2.16
ARF1-209ENST00000478424 GPRASP2Q96D09 838 aa28.53■■■□□ 2.16
ARF1-209ENST00000478424 CDHR1Q96JP9 859 aa28.53■■■□□ 2.16
ARF1-209ENST00000478424 RAD9AQ99638 391 aa28.53■■■□□ 2.16
ARF1-209ENST00000478424 SENP7Q9BQF6 1050 aa28.53■■■□□ 2.16
ARF1-209ENST00000478424 EHMT1Q9H9B1 1298 aa28.53■■■□□ 2.16
ARF1-209ENST00000478424 CDC45O75419 566 aa28.52■■■□□ 2.16
ARF1-209ENST00000478424 AMHP03971 560 aa28.52■■■□□ 2.16
ARF1-209ENST00000478424 NAPAP54920 295 aa28.52■■■□□ 2.16
ARF1-209ENST00000478424 TFF2Q03403 129 aa28.52■■■□□ 2.16
ARF1-209ENST00000478424 MTMR1Q13613 665 aa28.52■■■□□ 2.16
ARF1-209ENST00000478424 RTN1Q16799 776 aa28.52■■■□□ 2.16
ARF1-209ENST00000478424 SGMS1Q86VZ5 419 aa28.52■■■□□ 2.16
ARF1-209ENST00000478424 LMBR1Q8WVP7 490 aa28.52■■■□□ 2.16
ARF1-209ENST00000478424 SEPT8Q92599 483 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms